RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 NIFKQ9BYG3 293 aaKnown RBP3.1□□□□□ -1.91
HIF1A-212ENST00000557538 GZF1Q9H116 711 aaPredicted RBP3.1□□□□□ -1.91
HIF1A-212ENST00000557538 TSPAN10Q9H1Z9 355 aaPredicted RBP3.1□□□□□ -1.91
HIF1A-212ENST00000557538 EFCC1Q9HA90 598 aa3.1□□□□□ -1.91
HIF1A-212ENST00000557538 DMGDHQ9UI17 866 aaKnown RBP3.1□□□□□ -1.91
HIF1A-212ENST00000557538 CBLBQ13191 982 aa3.09□□□□□ -1.91
HIF1A-212ENST00000557538 C11orf91Q3C1V1 193 aa3.09□□□□□ -1.91
HIF1A-212ENST00000557538 MRPL14Q6P1L8 145 aaKnown RBP3.09□□□□□ -1.91
HIF1A-212ENST00000557538 NBPF10Q6P3W6 841 aaKnown RBP3.09□□□□□ -1.91
HIF1A-212ENST00000557538 ABTB2Q8N961 1025 aa3.09□□□□□ -1.91
HIF1A-212ENST00000557538 SCG3Q8WXD2 468 aaKnown RBP3.09□□□□□ -1.91
HIF1A-212ENST00000557538 KIFC2Q96AC6 838 aa3.09□□□□□ -1.91
HIF1A-212ENST00000557538 CAPN5O15484 640 aaPredicted RBP3.09□□□□□ -1.91
HIF1A-212ENST00000557538 PRMT3O60678 531 aa3.09□□□□□ -1.91
HIF1A-212ENST00000557538 IGHA2P01877 340 aa3.09□□□□□ -1.91
HIF1A-212ENST00000557538 RPLP1P05386 114 aaKnown RBP3.09□□□□□ -1.91
HIF1A-212ENST00000557538 KCNQ4P56696 695 aa3.09□□□□□ -1.91
HIF1A-212ENST00000557538 TLR1Q15399 786 aa3.09□□□□□ -1.91
HIF1A-212ENST00000557538 COX20Q5RI15 118 aa3.09□□□□□ -1.91
HIF1A-212ENST00000557538 ZSCAN10Q96SZ4 725 aaPredicted RBP3.09□□□□□ -1.91
HIF1A-212ENST00000557538 FAM129BQ96TA1 746 aa3.09□□□□□ -1.91
HIF1A-212ENST00000557538 ARHGEF10LQ9HCE6 1279 aa3.09□□□□□ -1.91
HIF1A-212ENST00000557538 CHMP3Q9Y3E7 222 aa3.09□□□□□ -1.91
HIF1A-212ENST00000557538 DNMT3AQ9Y6K1 912 aaPredicted RBP3.09□□□□□ -1.91
HIF1A-212ENST00000557538 POTECB2RU33 542 aa3.09□□□□□ -1.92
HIF1A-212ENST00000557538 FGD1P98174 961 aa3.09□□□□□ -1.92
HIF1A-212ENST00000557538 LAMC2Q13753 1193 aa3.09□□□□□ -1.92
HIF1A-212ENST00000557538 TMCO4Q5TGY1 634 aa3.09□□□□□ -1.92
HIF1A-212ENST00000557538 TRIM46Q7Z4K8 759 aa3.09□□□□□ -1.92
HIF1A-212ENST00000557538 NLRP8Q86W28 1048 aa3.09□□□□□ -1.92
HIF1A-212ENST00000557538 GTF3C2Q8WUA4 911 aaPredicted RBP3.09□□□□□ -1.92
HIF1A-212ENST00000557538 PRIMPOLQ96LW4 560 aa3.09□□□□□ -1.92
HIF1A-212ENST00000557538 ASB16Q96NS5 453 aa3.09□□□□□ -1.92
HIF1A-212ENST00000557538 PURBQ96QR8 312 aaKnown RBP3.09□□□□□ -1.92
HIF1A-212ENST00000557538 ANKIB1Q9P2G1 1089 aa3.09□□□□□ -1.92
HIF1A-212ENST00000557538 DYRK1BQ9Y463 629 aa3.09□□□□□ -1.92
HIF1A-212ENST00000557538 EGFRP00533 1210 aa3.08□□□□□ -1.92
HIF1A-212ENST00000557538 HOXD8P13378 290 aaPredicted RBP3.08□□□□□ -1.92
HIF1A-212ENST00000557538 PSME1Q06323 249 aa3.08□□□□□ -1.92
HIF1A-212ENST00000557538 GNASQ5JWF2 1037 aa3.08□□□□□ -1.92
HIF1A-212ENST00000557538 HINFPQ9BQA5 517 aa3.08□□□□□ -1.92
HIF1A-212ENST00000557538 PODXL2Q9NZ53 605 aa3.08□□□□□ -1.92
HIF1A-212ENST00000557538 STIM2Q9P246 746 aa3.08□□□□□ -1.92
HIF1A-212ENST00000557538 NOM1Q5C9Z4 860 aaKnown RBP3.08□□□□□ -1.92
HIF1A-212ENST00000557538 RGL4Q8IZJ4 473 aa3.08□□□□□ -1.92
HIF1A-212ENST00000557538 GJD3Q8N144 294 aa3.08□□□□□ -1.92
HIF1A-212ENST00000557538 USP3Q9Y6I4 520 aa3.08□□□□□ -1.92
HIF1A-212ENST00000557538 A0A1B0GTH6 734 aa3.07□□□□□ -1.92
HIF1A-212ENST00000557538 PPP1R12BO60237 982 aaPredicted RBP3.07□□□□□ -1.92
HIF1A-212ENST00000557538 MFAP1P55081 439 aaKnown RBP3.07□□□□□ -1.92
HIF1A-212ENST00000557538 DSC3Q14574 896 aa3.07□□□□□ -1.92
HIF1A-212ENST00000557538 C4orf17Q53FE4 359 aa3.07□□□□□ -1.92
HIF1A-212ENST00000557538 AEBP1Q8IUX7 1158 aa3.07□□□□□ -1.92
HIF1A-212ENST00000557538 FAM13BQ9NYF5 915 aa3.07□□□□□ -1.92
HIF1A-212ENST00000557538 SERTAD1Q9UHV2 236 aa3.07□□□□□ -1.92
HIF1A-212ENST00000557538 DCTN4Q9UJW0 460 aa3.07□□□□□ -1.92
HIF1A-212ENST00000557538 CARNS1A5YM72 827 aa3.07□□□□□ -1.92
HIF1A-212ENST00000557538 FZD6O60353 706 aa3.07□□□□□ -1.92
HIF1A-212ENST00000557538 UPP2O95045 317 aa3.07□□□□□ -1.92
HIF1A-212ENST00000557538 BRD2P25440 801 aaKnown RBP3.07□□□□□ -1.92
HIF1A-212ENST00000557538 GTF2E1P29083 439 aaPredicted RBP3.07□□□□□ -1.92
HIF1A-212ENST00000557538 LYSMD3Q7Z3D4 306 aa3.07□□□□□ -1.92
HIF1A-212ENST00000557538 SENP2Q9HC62 589 aa3.07□□□□□ -1.92
HIF1A-212ENST00000557538 AAASQ9NRG9 546 aa3.07□□□□□ -1.92
HIF1A-212ENST00000557538 FMR1Q06787 632 aaKnown RBP eCLIP3.07□□□□□ -1.92
HIF1A-212ENST00000557538 SCARF1Q14162 830 aa3.07□□□□□ -1.92
HIF1A-212ENST00000557538 CCDC27Q2M243 656 aa3.07□□□□□ -1.92
HIF1A-212ENST00000557538 NPAS3Q8IXF0 933 aa3.07□□□□□ -1.92
HIF1A-212ENST00000557538 L3MBTL2Q969R5 705 aa3.07□□□□□ -1.92
HIF1A-212ENST00000557538 DMRTB1Q96MA1 342 aa3.07□□□□□ -1.92
HIF1A-212ENST00000557538 TNFRSF10AO00220 468 aa3.06□□□□□ -1.92
HIF1A-212ENST00000557538 ATP4AP20648 1035 aa3.06□□□□□ -1.92
HIF1A-212ENST00000557538 USP5P45974 858 aa3.06□□□□□ -1.92
HIF1A-212ENST00000557538 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.06□□□□□ -1.922e-7■□□□□ 8.5
HIF1A-212ENST00000557538 FBXO33Q7Z6M2 555 aa3.06□□□□□ -1.92
HIF1A-212ENST00000557538 ALDH16A1Q8IZ83 802 aa3.06□□□□□ -1.92
HIF1A-212ENST00000557538 AGBL1Q96MI9 1066 aa3.06□□□□□ -1.92
HIF1A-212ENST00000557538 ZIC5Q96T25 663 aa3.06□□□□□ -1.92
HIF1A-212ENST00000557538 NDFIP2Q9NV92 336 aa3.06□□□□□ -1.92
HIF1A-212ENST00000557538 SLC35F4A4IF30 521 aa3.06□□□□□ -1.92
HIF1A-212ENST00000557538 TGFBR3LH3BV60 316 aa3.06□□□□□ -1.92
HIF1A-212ENST00000557538 CTSOP43234 321 aaPredicted RBP3.06□□□□□ -1.92
HIF1A-212ENST00000557538 UBAP2LQ14157 1087 aaKnown RBP3.06□□□□□ -1.92
HIF1A-212ENST00000557538 ANKRD24Q8TF21 1146 aa3.06□□□□□ -1.92
HIF1A-212ENST00000557538 NANOS1Q8WY41 292 aaKnown RBP3.06□□□□□ -1.92
HIF1A-212ENST00000557538 FRMD6Q96NE9 622 aa3.06□□□□□ -1.92
HIF1A-212ENST00000557538 LRFN2Q9ULH4 789 aa3.06□□□□□ -1.92
HIF1A-212ENST00000557538 MSX1P28360 303 aa3.06□□□□□ -1.92
HIF1A-212ENST00000557538 MZF1P28698 734 aaPredicted RBP3.06□□□□□ -1.92
HIF1A-212ENST00000557538 RAB15P59190 212 aa3.06□□□□□ -1.92
HIF1A-212ENST00000557538 NBPF1Q3BBV0 1214 aa3.06□□□□□ -1.92
HIF1A-212ENST00000557538 NPAS4Q8IUM7 802 aa3.06□□□□□ -1.92
HIF1A-212ENST00000557538 ATP13A2Q9NQ11 1180 aa3.06□□□□□ -1.92
HIF1A-212ENST00000557538 SEPT3Q9UH03 358 aa3.06□□□□□ -1.92
HIF1A-212ENST00000557538 BCS1LQ9Y276 419 aa3.06□□□□□ -1.92
HIF1A-212ENST00000557538 TTLL8A6PVC2 850 aa3.05□□□□□ -1.92
HIF1A-212ENST00000557538 MEN1O00255 615 aa3.05□□□□□ -1.92
HIF1A-212ENST00000557538 GFRA3O60609 400 aa3.05□□□□□ -1.92
HIF1A-212ENST00000557538 STAU1O95793 577 aaKnown RBP3.05□□□□□ -1.92
HIF1A-212ENST00000557538 NEFLP07196 543 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms