RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 ZNF496Q96IT1 587 aaPredicted RBP30.06■■■□□ 2.4
PABPN1-207ENST00000556821 HTATSF1O43719 755 aaKnown RBP30.05■■■□□ 2.4
PABPN1-207ENST00000556821 CYP19A1P11511 503 aaPredicted RBP30.05■■■□□ 2.4
PABPN1-207ENST00000556821 TRAPPC3LQ5T215 181 aa30.05■■■□□ 2.4
PABPN1-207ENST00000556821 TTC5Q8N0Z6 440 aa30.05■■■□□ 2.4
PABPN1-207ENST00000556821 VSIG10Q8N0Z9 540 aa30.05■■■□□ 2.4
PABPN1-207ENST00000556821 RTF1Q92541 710 aaKnown RBP30.05■■■□□ 2.4
PABPN1-207ENST00000556821 ARHGEF1Q92888 912 aaKnown RBP30.05■■■□□ 2.4
PABPN1-207ENST00000556821 KIAA1551Q9HCM1 1747 aa30.05■■■□□ 2.4
PABPN1-207ENST00000556821 HEG1Q9ULI3 1381 aa30.04■■■□□ 2.4
PABPN1-207ENST00000556821 ZNF316A6NFI3 1004 aaPredicted RBP30.03■■■□□ 2.4
PABPN1-207ENST00000556821 NEFMP07197 916 aa30.03■■■□□ 2.4
PABPN1-207ENST00000556821 CCDC87Q9NVE4 849 aa30.03■■■□□ 2.4
PABPN1-207ENST00000556821 KCNQ3O43525 872 aa30.02■■■□□ 2.4
PABPN1-207ENST00000556821 NFE2L2Q16236 605 aa30.02■■■□□ 2.4
PABPN1-207ENST00000556821 BTBD11A6QL63 1104 aa30.01■■■□□ 2.39
PABPN1-207ENST00000556821 SCN7AQ01118 1682 aa30.01■■■□□ 2.39
PABPN1-207ENST00000556821 AFDNP55196 1824 aaKnown RBP30.01■■■□□ 2.39
PABPN1-207ENST00000556821 MAPK8IP3Q9UPT6 1336 aa30■■■□□ 2.39
PABPN1-207ENST00000556821 PNNQ9H307 717 aaKnown RBP30■■■□□ 2.39
PABPN1-207ENST00000556821 SOS1Q07889 1333 aaPredicted RBP29.99■■■□□ 2.39
PABPN1-207ENST00000556821 COL13A1Q5TAT6 717 aaPredicted RBP29.99■■■□□ 2.39
PABPN1-207ENST00000556821 JMYQ8N9B5 988 aa29.99■■■□□ 2.39
PABPN1-207ENST00000556821 ZBTB1Q9Y2K1 713 aa29.99■■■□□ 2.39
PABPN1-207ENST00000556821 BCORQ6W2J9 1755 aa29.98■■■□□ 2.39
PABPN1-207ENST00000556821 N4BP2Q86UW6 1770 aaPredicted RBP29.98■■■□□ 2.39
PABPN1-207ENST00000556821 GYS1P13807 737 aa29.97■■■□□ 2.39
PABPN1-207ENST00000556821 RFC4P35249 363 aa29.97■■■□□ 2.39
PABPN1-207ENST00000556821 BRCA1P38398 1863 aaKnown RBP29.97■■■□□ 2.39
PABPN1-207ENST00000556821 USP42Q9H9J4 1324 aaKnown RBP29.96■■■□□ 2.39
PABPN1-207ENST00000556821 FMNL2Q96PY5 1086 aa29.96■■■□□ 2.39
PABPN1-207ENST00000556821 COL15A1P39059 1388 aa29.95■■■□□ 2.39
PABPN1-207ENST00000556821 NMRK2Q9NPI5 230 aa29.95■■■□□ 2.39
PABPN1-207ENST00000556821 SRP68Q9UHB9 627 aaKnown RBP29.95■■■□□ 2.39
PABPN1-207ENST00000556821 KLRG1Q96E93 195 aa29.94■■■□□ 2.38
PABPN1-207ENST00000556821 THUMPD2Q9BTF0 503 aaKnown RBP29.94■■■□□ 2.38
PABPN1-207ENST00000556821 MMP10P09238 476 aa29.93■■■□□ 2.38
PABPN1-207ENST00000556821 RBM46Q8TBY0 533 aaKnown RBP29.93■■■□□ 2.38
PABPN1-207ENST00000556821 NRXN2Q9P2S2 1712 aa29.93■■■□□ 2.38
PABPN1-207ENST00000556821 TGFB2P61812 414 aa29.92■■■□□ 2.38
PABPN1-207ENST00000556821 TAF7Q15545 349 aaPredicted RBP29.92■■■□□ 2.38
PABPN1-207ENST00000556821 NLGN1Q8N2Q7 840 aa29.92■■■□□ 2.38
PABPN1-207ENST00000556821 WDR43Q15061 677 aaKnown RBP eCLIP29.91■■■□□ 2.38
PABPN1-207ENST00000556821 CCDC146Q8IYE0 955 aa29.91■■■□□ 2.38
PABPN1-207ENST00000556821 STARD3NLO95772 234 aa29.9■■■□□ 2.38
PABPN1-207ENST00000556821 TEX13AQ9BXU3 409 aaPredicted RBP29.9■■■□□ 2.38
PABPN1-207ENST00000556821 ADAMTS8Q9UP79 889 aa29.9■■■□□ 2.38
PABPN1-207ENST00000556821 PXDNLA1KZ92 1463 aa29.9■■■□□ 2.38
PABPN1-207ENST00000556821 CANXP27824 592 aaKnown RBP29.89■■■□□ 2.38
PABPN1-207ENST00000556821 TMPOP42166 694 aaKnown RBP29.89■■■□□ 2.38
PABPN1-207ENST00000556821 MIS18AQ9NYP9 233 aa29.89■■■□□ 2.38
PABPN1-207ENST00000556821 PRAMEF22A3QJZ6 481 aa29.88■■■□□ 2.37
PABPN1-207ENST00000556821 FKBP8Q14318 412 aa29.88■■■□□ 2.37
PABPN1-207ENST00000556821 C10orf71Q711Q0 1435 aa29.88■■■□□ 2.37
PABPN1-207ENST00000556821 EIF5P55010 431 aaKnown RBP29.87■■■□□ 2.37
PABPN1-207ENST00000556821 RIPK4P57078 832 aa29.87■■■□□ 2.37
PABPN1-207ENST00000556821 HTRA3P83110 453 aa29.87■■■□□ 2.37
PABPN1-207ENST00000556821 NARFQ9UHQ1 456 aa29.86■■■□□ 2.37
PABPN1-207ENST00000556821 USP16Q9Y5T5 823 aa29.86■■■□□ 2.37
PABPN1-207ENST00000556821 A0A0G2JLW4 131 aa29.85■■■□□ 2.37
PABPN1-207ENST00000556821 FSTL1Q12841 308 aa29.85■■■□□ 2.37
PABPN1-207ENST00000556821 USPL1Q5W0Q7 1092 aa29.85■■■□□ 2.37
PABPN1-207ENST00000556821 RUNDC1Q96C34 613 aa29.85■■■□□ 2.37
PABPN1-207ENST00000556821 BCS1LQ9Y276 419 aa29.85■■■□□ 2.37
PABPN1-207ENST00000556821 RRP7AQ9Y3A4 280 aaKnown RBP29.85■■■□□ 2.37
PABPN1-207ENST00000556821 A1BGP04217 495 aa29.84■■■□□ 2.37
PABPN1-207ENST00000556821 PRELPP51888 382 aa29.84■■■□□ 2.37
PABPN1-207ENST00000556821 CCDC184Q52MB2 194 aa29.84■■■□□ 2.37
PABPN1-207ENST00000556821 ARHGAP27Q6ZUM4 889 aa29.84■■■□□ 2.37
PABPN1-207ENST00000556821 SNRPA1P09661 255 aaKnown RBP29.83■■■□□ 2.37
PABPN1-207ENST00000556821 DDR1Q08345 913 aa29.83■■■□□ 2.37
PABPN1-207ENST00000556821 BCL2L12Q9HB09 334 aa29.83■■■□□ 2.37
PABPN1-207ENST00000556821 DLEC1Q9Y238 1755 aa29.82■■■□□ 2.36
PABPN1-207ENST00000556821 ZPR1O75312 459 aa29.82■■■□□ 2.36
PABPN1-207ENST00000556821 PNISRQ8TF01 805 aaKnown RBP29.82■■■□□ 2.36
PABPN1-207ENST00000556821 ANKRD31Q8N7Z5 1873 aa29.82■■■□□ 2.36
PABPN1-207ENST00000556821 IL6STP40189 918 aaPredicted RBP29.81■■■□□ 2.36
PABPN1-207ENST00000556821 NUP98P52948 1817 aa29.8■■■□□ 2.36
PABPN1-207ENST00000556821 ARFGEF1Q9Y6D6 1849 aa29.8■■■□□ 2.36
PABPN1-207ENST00000556821 DPEP1P16444 411 aa29.79■■■□□ 2.36
PABPN1-207ENST00000556821 KCNA3P22001 575 aa29.79■■■□□ 2.36
PABPN1-207ENST00000556821 TM4SF1P30408 202 aa29.79■■■□□ 2.36
PABPN1-207ENST00000556821 PIP4K2AP48426 406 aaPredicted RBP29.79■■■□□ 2.36
PABPN1-207ENST00000556821 LMOD3Q0VAK6 560 aa29.79■■■□□ 2.36
PABPN1-207ENST00000556821 PARP3Q9Y6F1 533 aa29.79■■■□□ 2.36
PABPN1-207ENST00000556821 EIF4A1P60842 406 aaKnown RBP29.78■■■□□ 2.36
PABPN1-207ENST00000556821 NEUROD2Q15784 382 aa29.78■■■□□ 2.36
PABPN1-207ENST00000556821 C9orf131Q5VYM1 1079 aa29.78■■■□□ 2.36
PABPN1-207ENST00000556821 TNS4Q8IZW8 715 aa29.78■■■□□ 2.36
PABPN1-207ENST00000556821 TRIM35Q9UPQ4 493 aa29.78■■■□□ 2.36
PABPN1-207ENST00000556821 ZNF330Q9Y3S2 320 aaPredicted RBP29.77■■■□□ 2.36
PABPN1-207ENST00000556821 A0A087WZG4 1122 aa29.76■■■□□ 2.35
PABPN1-207ENST00000556821 POLRMTO00411 1230 aaKnown RBP29.76■■■□□ 2.35
PABPN1-207ENST00000556821 CAPN15O75808 1086 aa29.76■■■□□ 2.35
PABPN1-207ENST00000556821 NFIXQ14938 502 aa29.76■■■□□ 2.35
PABPN1-207ENST00000556821 NBPF26B4DH59 902 aa29.75■■■□□ 2.35
PABPN1-207ENST00000556821 NBPF10Q6P3W6 841 aaKnown RBP29.75■■■□□ 2.35
PABPN1-207ENST00000556821 NBPF15Q8N660 670 aa29.75■■■□□ 2.35
PABPN1-207ENST00000556821 TBC1D2BQ9UPU7 963 aa29.75■■■□□ 2.35
PABPN1-207ENST00000556821 WDR90Q96KV7 1748 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms