RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 VAMP4O75379 141 aa22.48■■□□□ 1.19
TUBB3-211ENST00000556536 HOXB7P09629 217 aa22.48■■□□□ 1.19
TUBB3-211ENST00000556536 CYP19A1P11511 503 aaPredicted RBP22.48■■□□□ 1.19
TUBB3-211ENST00000556536 NECTIN2Q92692 538 aa22.48■■□□□ 1.19
TUBB3-211ENST00000556536 EIF2S2P20042 333 aaKnown RBP22.47■■□□□ 1.19
TUBB3-211ENST00000556536 TEX13AQ9BXU3 409 aaPredicted RBP22.47■■□□□ 1.19
TUBB3-211ENST00000556536 TJP1Q07157 1748 aa22.47■■□□□ 1.19
TUBB3-211ENST00000556536 C5P01031 1676 aa22.46■■□□□ 1.19
TUBB3-211ENST00000556536 CASZ1Q86V15 1759 aa22.45■■□□□ 1.19
TUBB3-211ENST00000556536 STARD3NLO95772 234 aa22.45■■□□□ 1.18
TUBB3-211ENST00000556536 HDGFL1Q5TGJ6 251 aa22.45■■□□□ 1.18
TUBB3-211ENST00000556536 SOS1Q07889 1333 aaPredicted RBP22.45■■□□□ 1.18
TUBB3-211ENST00000556536 ZNF831Q5JPB2 1677 aa22.45■■□□□ 1.18
TUBB3-211ENST00000556536 A1BGP04217 495 aa22.44■■□□□ 1.18
TUBB3-211ENST00000556536 CICQ96RK0 1608 aaPredicted RBP22.44■■□□□ 1.18
TUBB3-211ENST00000556536 ANO8Q9HCE9 1232 aaPredicted RBP22.44■■□□□ 1.18
TUBB3-211ENST00000556536 TCERG1O14776 1098 aaKnown RBP22.43■■□□□ 1.18
TUBB3-211ENST00000556536 CRKLP46109 303 aaKnown RBP22.43■■□□□ 1.18
TUBB3-211ENST00000556536 PIP4K2AP48426 406 aaPredicted RBP22.43■■□□□ 1.18
TUBB3-211ENST00000556536 INTS5Q6P9B9 1019 aaKnown RBP22.43■■□□□ 1.18
TUBB3-211ENST00000556536 CNTNAP4Q9C0A0 1308 aa22.41■■□□□ 1.18
TUBB3-211ENST00000556536 NBPF26B4DH59 902 aa22.41■■□□□ 1.18
TUBB3-211ENST00000556536 NBPF10Q6P3W6 841 aaKnown RBP22.41■■□□□ 1.18
TUBB3-211ENST00000556536 NBPF15Q8N660 670 aa22.41■■□□□ 1.18
TUBB3-211ENST00000556536 CCDC87Q9NVE4 849 aa22.41■■□□□ 1.18
TUBB3-211ENST00000556536 ZBTB1Q9Y2K1 713 aa22.41■■□□□ 1.18
TUBB3-211ENST00000556536 CT47B1P0C2W7 299 aaPredicted RBP22.4■■□□□ 1.18
TUBB3-211ENST00000556536 PDIA6Q15084 440 aa22.4■■□□□ 1.18
TUBB3-211ENST00000556536 ZNF827Q17R98 1081 aa22.4■■□□□ 1.18
TUBB3-211ENST00000556536 PROSER3Q2NL68 480 aa22.4■■□□□ 1.18
TUBB3-211ENST00000556536 RC3H1Q5TC82 1133 aaKnown RBP22.4■■□□□ 1.18
TUBB3-211ENST00000556536 CHPF2Q9P2E5 772 aa22.4■■□□□ 1.18
TUBB3-211ENST00000556536 ANXA1P04083 346 aa22.39■■□□□ 1.17
TUBB3-211ENST00000556536 CANXP27824 592 aaKnown RBP22.39■■□□□ 1.17
TUBB3-211ENST00000556536 CCDC30Q5VVM6 783 aa22.39■■□□□ 1.17
TUBB3-211ENST00000556536 UTRNP46939 3433 aa22.39■■□□□ 1.17
TUBB3-211ENST00000556536 COL5A3P25940 1745 aaPredicted RBP22.38■■□□□ 1.17
TUBB3-211ENST00000556536 SMIM5Q71RC9 77 aa22.38■■□□□ 1.17
TUBB3-211ENST00000556536 AMIGO3Q86WK7 504 aa22.38■■□□□ 1.17
TUBB3-211ENST00000556536 AKT1S1Q96B36 256 aa22.38■■□□□ 1.17
TUBB3-211ENST00000556536 LAMB4A4D0S4 1761 aa22.38■■□□□ 1.17
TUBB3-211ENST00000556536 C4BP0C0L5 1744 aa22.37■■□□□ 1.17
TUBB3-211ENST00000556536 ZBTB7AO95365 584 aa22.37■■□□□ 1.17
TUBB3-211ENST00000556536 MYL6BP14649 208 aa22.37■■□□□ 1.17
TUBB3-211ENST00000556536 SSH1Q8WYL5 1049 aa22.37■■□□□ 1.17
TUBB3-211ENST00000556536 AK7Q96M32 723 aa22.37■■□□□ 1.17
TUBB3-211ENST00000556536 PDGFDQ9GZP0 370 aaPredicted RBP22.37■■□□□ 1.17
TUBB3-211ENST00000556536 ERBB4Q15303 1308 aa22.36■■□□□ 1.17
TUBB3-211ENST00000556536 GNPATO15228 680 aa22.36■■□□□ 1.17
TUBB3-211ENST00000556536 PTGER2P43116 358 aa22.36■■□□□ 1.17
TUBB3-211ENST00000556536 RARSP54136 660 aaKnown RBP22.36■■□□□ 1.17
TUBB3-211ENST00000556536 LRP10Q7Z4F1 713 aa22.36■■□□□ 1.17
TUBB3-211ENST00000556536 BCL2L13Q9BXK5 485 aa22.36■■□□□ 1.17
TUBB3-211ENST00000556536 DDX21Q9NR30 783 aaKnown RBP eCLIP22.36■■□□□ 1.17
TUBB3-211ENST00000556536 DBF4Q9UBU7 674 aaPredicted RBP22.36■■□□□ 1.17
TUBB3-211ENST00000556536 ZNF784Q8NCA9 323 aaPredicted RBP22.35■■□□□ 1.17
TUBB3-211ENST00000556536 ZNF428Q96B54 188 aa22.35■■□□□ 1.17
TUBB3-211ENST00000556536 STK31Q9BXU1 1019 aa22.35■■□□□ 1.17
TUBB3-211ENST00000556536 CHMP4AQ9BY43 222 aa22.35■■□□□ 1.17
TUBB3-211ENST00000556536 TAF1LQ8IZX4 1826 aa22.35■■□□□ 1.17
TUBB3-211ENST00000556536 RPS6KA4O75676 772 aa22.34■■□□□ 1.17
TUBB3-211ENST00000556536 SLC4A2P04920 1241 aa22.34■■□□□ 1.17
TUBB3-211ENST00000556536 HMGB2P26583 209 aaKnown RBP22.34■■□□□ 1.17
TUBB3-211ENST00000556536 STK32BQ9NY57 414 aa22.34■■□□□ 1.17
TUBB3-211ENST00000556536 IL6STP40189 918 aaPredicted RBP22.33■■□□□ 1.17
TUBB3-211ENST00000556536 EIF5P55010 431 aaKnown RBP22.33■■□□□ 1.17
TUBB3-211ENST00000556536 ALDH1L2Q3SY69 923 aa22.33■■□□□ 1.17
TUBB3-211ENST00000556536 MRPL50Q8N5N7 158 aaKnown RBP22.33■■□□□ 1.17
TUBB3-211ENST00000556536 ATF5Q9Y2D1 282 aaPredicted RBP22.33■■□□□ 1.17
TUBB3-211ENST00000556536 ZNF330Q9Y3S2 320 aaPredicted RBP22.33■■□□□ 1.17
TUBB3-211ENST00000556536 BCAR3O75815 825 aa22.32■■□□□ 1.16
TUBB3-211ENST00000556536 SLC15A2Q16348 729 aa22.32■■□□□ 1.16
TUBB3-211ENST00000556536 G2E3Q7L622 706 aa22.32■■□□□ 1.16
TUBB3-211ENST00000556536 PHAXQ9H814 394 aaKnown RBP22.32■■□□□ 1.16
TUBB3-211ENST00000556536 SMC4Q9NTJ3 1288 aa22.32■■□□□ 1.16
TUBB3-211ENST00000556536 HYPKQ9NX55 129 aa22.32■■□□□ 1.16
TUBB3-211ENST00000556536 TFCP2L1Q9NZI6 479 aa22.32■■□□□ 1.16
TUBB3-211ENST00000556536 RTCBQ9Y3I0 505 aaKnown RBP22.32■■□□□ 1.16
TUBB3-211ENST00000556536 MYH14Q7Z406 1995 aaKnown RBP22.32■■□□□ 1.16
TUBB3-211ENST00000556536 PHF14O94880 888 aa22.31■■□□□ 1.16
TUBB3-211ENST00000556536 SYT17Q9BSW7 474 aa22.31■■□□□ 1.16
TUBB3-211ENST00000556536 FHDC1Q9C0D6 1143 aaPredicted RBP22.31■■□□□ 1.16
TUBB3-211ENST00000556536 RCAN3Q9UKA8 241 aa22.31■■□□□ 1.16
TUBB3-211ENST00000556536 XAGE3Q8WTP9 111 aa22.3■■□□□ 1.16
TUBB3-211ENST00000556536 MTFR1LQ9H019 292 aa22.3■■□□□ 1.16
TUBB3-211ENST00000556536 COL15A1P39059 1388 aa22.29■■□□□ 1.16
TUBB3-211ENST00000556536 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.29■■□□□ 1.16
TUBB3-211ENST00000556536 AIMP1Q12904 312 aaKnown RBP22.29■■□□□ 1.16
TUBB3-211ENST00000556536 TTLL7Q6ZT98 887 aa22.29■■□□□ 1.16
TUBB3-211ENST00000556536 COPS6Q7L5N1 327 aa22.29■■□□□ 1.16
TUBB3-211ENST00000556536 SSFA2P28290 1259 aa22.28■■□□□ 1.16
TUBB3-211ENST00000556536 ARHGEF1Q92888 912 aaKnown RBP22.28■■□□□ 1.16
TUBB3-211ENST00000556536 TRAPPC3LQ5T215 181 aa22.27■■□□□ 1.16
TUBB3-211ENST00000556536 TBC1D2BQ9UPU7 963 aa22.27■■□□□ 1.16
TUBB3-211ENST00000556536 PNPLA7Q6ZV29 1317 aa22.27■■□□□ 1.16
TUBB3-211ENST00000556536 BRPF1P55201 1214 aaPredicted RBP22.26■■□□□ 1.15
TUBB3-211ENST00000556536 FLIIQ13045 1269 aa22.26■■□□□ 1.15
TUBB3-211ENST00000556536 COL23A1Q86Y22 540 aaPredicted RBP22.26■■□□□ 1.15
TUBB3-211ENST00000556536 ARXQ96QS3 562 aa22.26■■□□□ 1.15
TUBB3-211ENST00000556536 A0A087WZG4 1122 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms