RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 ATG3Q9NT62 314 aa8.05□□□□□ -1.12
PRKCH-220ENST00000556164 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.05□□□□□ -1.12
PRKCH-220ENST00000556164 RTCBQ9Y3I0 505 aaKnown RBP8.05□□□□□ -1.12
PRKCH-220ENST00000556164 SBF1O95248 1867 aa8.04□□□□□ -1.12
PRKCH-220ENST00000556164 TESPA1A2RU30 521 aaPredicted RBP8.04□□□□□ -1.12
PRKCH-220ENST00000556164 SPDYE2BA6NHP3 402 aa8.04□□□□□ -1.12
PRKCH-220ENST00000556164 TOMM70O94826 608 aa8.04□□□□□ -1.12
PRKCH-220ENST00000556164 FCHSD2O94868 740 aa8.04□□□□□ -1.12
PRKCH-220ENST00000556164 SPDYE6P0CI01 402 aa8.04□□□□□ -1.12
PRKCH-220ENST00000556164 TGFB2P61812 414 aa8.04□□□□□ -1.12
PRKCH-220ENST00000556164 SPDYE2Q495Y8 402 aa8.04□□□□□ -1.12
PRKCH-220ENST00000556164 ARHGAP27Q6ZUM4 889 aa8.04□□□□□ -1.12
PRKCH-220ENST00000556164 NLGN1Q8N2Q7 840 aa8.04□□□□□ -1.12
PRKCH-220ENST00000556164 NMRK2Q9NPI5 230 aa8.04□□□□□ -1.12
PRKCH-220ENST00000556164 CCDC87Q9NVE4 849 aa8.04□□□□□ -1.12
PRKCH-220ENST00000556164 KDRP35968 1356 aa8.04□□□□□ -1.12
PRKCH-220ENST00000556164 DPEP1P16444 411 aa8.03□□□□□ -1.12
PRKCH-220ENST00000556164 RFC4P35249 363 aa8.03□□□□□ -1.12
PRKCH-220ENST00000556164 TNNT2P45379 298 aaPredicted RBP8.03□□□□□ -1.12
PRKCH-220ENST00000556164 POLKQ9UBT6 870 aa8.03□□□□□ -1.12
PRKCH-220ENST00000556164 PARP3Q9Y6F1 533 aa8.03□□□□□ -1.12
PRKCH-220ENST00000556164 VIRMAQ69YN4 1812 aaKnown RBP8.03□□□□□ -1.12
PRKCH-220ENST00000556164 CNTNAP4Q9C0A0 1308 aa8.03□□□□□ -1.12
PRKCH-220ENST00000556164 TNRC6CQ9HCJ0 1690 aaKnown RBP8.02□□□□□ -1.13
PRKCH-220ENST00000556164 GYS1P13807 737 aa8.02□□□□□ -1.13
PRKCH-220ENST00000556164 EIF4A2Q14240 407 aaKnown RBP8.02□□□□□ -1.13
PRKCH-220ENST00000556164 C16orf71Q8IYS4 520 aaPredicted RBP8.02□□□□□ -1.13
PRKCH-220ENST00000556164 SLC4A9Q96Q91 983 aa8.02□□□□□ -1.13
PRKCH-220ENST00000556164 ARID3AQ99856 593 aa8.02□□□□□ -1.13
PRKCH-220ENST00000556164 POLR3GLQ9BT43 218 aa8.02□□□□□ -1.13
PRKCH-220ENST00000556164 TJP1Q07157 1748 aa8.02□□□□□ -1.13
PRKCH-220ENST00000556164 CCDC88AQ3V6T2 1871 aa8.02□□□□□ -1.13
PRKCH-220ENST00000556164 PLEKHG2Q9H7P9 1386 aa8.01□□□□□ -1.13
PRKCH-220ENST00000556164 ERVV-2B6SEH9 535 aa8.01□□□□□ -1.13
PRKCH-220ENST00000556164 HSP90AB1P08238 724 aaKnown RBP8.01□□□□□ -1.13
PRKCH-220ENST00000556164 CHRM1P11229 460 aaPredicted RBP8.01□□□□□ -1.13
PRKCH-220ENST00000556164 CABP4P57796 275 aa8.01□□□□□ -1.13
PRKCH-220ENST00000556164 RC3H1Q5TC82 1133 aaKnown RBP8.01□□□□□ -1.13
PRKCH-220ENST00000556164 C9orf131Q5VYM1 1079 aa8.01□□□□□ -1.13
PRKCH-220ENST00000556164 DNAJC5GQ8N7S2 189 aa8.01□□□□□ -1.13
PRKCH-220ENST00000556164 DCAF5Q96JK2 942 aa8.01□□□□□ -1.13
PRKCH-220ENST00000556164 KCPQ6ZWJ8 1503 aa8.01□□□□□ -1.13
PRKCH-220ENST00000556164 SCN11AQ9UI33 1791 aa8.01□□□□□ -1.13
PRKCH-220ENST00000556164 KDM6AO15550 1401 aaPredicted RBP8.01□□□□□ -1.13
PRKCH-220ENST00000556164 AFDNP55196 1824 aaKnown RBP8.01□□□□□ -1.13
PRKCH-220ENST00000556164 PTCD1O75127 700 aaKnown RBP8□□□□□ -1.13
PRKCH-220ENST00000556164 RPS6KA4O75676 772 aa8□□□□□ -1.13
PRKCH-220ENST00000556164 PLEKHO1Q53GL0 409 aaPredicted RBP8□□□□□ -1.13
PRKCH-220ENST00000556164 ZNF530Q6P9A1 599 aaPredicted RBP8□□□□□ -1.13
PRKCH-220ENST00000556164 RBM46Q8TBY0 533 aaKnown RBP8□□□□□ -1.13
PRKCH-220ENST00000556164 PIM2Q9P1W9 311 aa8□□□□□ -1.13
PRKCH-220ENST00000556164 STK24Q9Y6E0 443 aa8□□□□□ -1.13
PRKCH-220ENST00000556164 KCNA3P22001 575 aa7.99□□□□□ -1.13
PRKCH-220ENST00000556164 CRKLP46109 303 aaKnown RBP7.99□□□□□ -1.13
PRKCH-220ENST00000556164 HTRA3P83110 453 aa7.99□□□□□ -1.13
PRKCH-220ENST00000556164 DALRD3Q5D0E6 543 aaKnown RBP7.99□□□□□ -1.13
PRKCH-220ENST00000556164 C1orf141Q5JVX7 400 aa7.99□□□□□ -1.13
PRKCH-220ENST00000556164 RNF181Q9P0P0 153 aa7.99□□□□□ -1.13
PRKCH-220ENST00000556164 SRP68Q9UHB9 627 aaKnown RBP7.99□□□□□ -1.13
PRKCH-220ENST00000556164 DLEC1Q9Y238 1755 aa7.99□□□□□ -1.13
PRKCH-220ENST00000556164 KDM2BQ8NHM5 1336 aa7.99□□□□□ -1.13
PRKCH-220ENST00000556164 ADAMTS7Q9UKP4 1686 aa7.98□□□□□ -1.13
PRKCH-220ENST00000556164 TIAM2Q8IVF5 1701 aa7.98□□□□□ -1.13
PRKCH-220ENST00000556164 CHRNA5P30532 468 aa7.98□□□□□ -1.13
PRKCH-220ENST00000556164 MTHFSP49914 203 aa7.98□□□□□ -1.13
PRKCH-220ENST00000556164 NUBP1P53384 320 aa7.98□□□□□ -1.13
PRKCH-220ENST00000556164 DDR1Q08345 913 aa7.98□□□□□ -1.13
PRKCH-220ENST00000556164 FSTL1Q12841 308 aa7.98□□□□□ -1.13
PRKCH-220ENST00000556164 AMOTQ4VCS5 1084 aa7.98□□□□□ -1.13
PRKCH-220ENST00000556164 SMYD5Q6GMV2 418 aa7.98□□□□□ -1.13
PRKCH-220ENST00000556164 KLRG1Q96E93 195 aa7.98□□□□□ -1.13
PRKCH-220ENST00000556164 RRAGCQ9HB90 399 aa7.98□□□□□ -1.13
PRKCH-220ENST00000556164 USP42Q9H9J4 1324 aaKnown RBP7.98□□□□□ -1.13
PRKCH-220ENST00000556164 AEBP1Q8IUX7 1158 aa7.97□□□□□ -1.13
PRKCH-220ENST00000556164 NFATC2IPQ8NCF5 419 aa7.97□□□□□ -1.13
PRKCH-220ENST00000556164 NRXN2Q9P2S2 1712 aa7.96□□□□□ -1.14
PRKCH-220ENST00000556164 POLRMTO00411 1230 aaKnown RBP7.96□□□□□ -1.14
PRKCH-220ENST00000556164 ZPR1O75312 459 aa7.96□□□□□ -1.14
PRKCH-220ENST00000556164 CAPN15O75808 1086 aa7.96□□□□□ -1.14
PRKCH-220ENST00000556164 RASSF7Q02833 373 aa7.96□□□□□ -1.14
PRKCH-220ENST00000556164 COL13A1Q5TAT6 717 aaPredicted RBP7.96□□□□□ -1.14
PRKCH-220ENST00000556164 CACNA1SQ13698 1873 aa7.96□□□□□ -1.14
PRKCH-220ENST00000556164 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.95□□□□□ -1.14
PRKCH-220ENST00000556164 APBB1O00213 710 aa7.95□□□□□ -1.14
PRKCH-220ENST00000556164 FLIIQ13045 1269 aa7.95□□□□□ -1.14
PRKCH-220ENST00000556164 USPL1Q5W0Q7 1092 aa7.95□□□□□ -1.14
PRKCH-220ENST00000556164 SULT6B1Q6IMI4 303 aa7.95□□□□□ -1.14
PRKCH-220ENST00000556164 INTS5Q6P9B9 1019 aaKnown RBP7.95□□□□□ -1.14
PRKCH-220ENST00000556164 JMYQ8N9B5 988 aa7.95□□□□□ -1.14
PRKCH-220ENST00000556164 SMC1BQ8NDV3 1235 aa7.95□□□□□ -1.14
PRKCH-220ENST00000556164 NECTIN2Q92692 538 aa7.95□□□□□ -1.14
PRKCH-220ENST00000556164 ZFP91Q96JP5 570 aaPredicted RBP7.95□□□□□ -1.14
PRKCH-220ENST00000556164 DICER1Q9UPY3 1922 aaKnown RBP7.95□□□□□ -1.14
PRKCH-220ENST00000556164 SEMA3EO15041 775 aa7.94□□□□□ -1.14
PRKCH-220ENST00000556164 TM4SF1P30408 202 aa7.94□□□□□ -1.14
PRKCH-220ENST00000556164 MORC1Q86VD1 984 aa7.94□□□□□ -1.14
PRKCH-220ENST00000556164 DNAJC10Q8IXB1 793 aa7.94□□□□□ -1.14
PRKCH-220ENST00000556164 PANK3Q9H999 370 aa7.94□□□□□ -1.14
PRKCH-220ENST00000556164 SPINK5Q9NQ38 1064 aaPredicted RBP7.94□□□□□ -1.14
PRKCH-220ENST00000556164 SOS1Q07889 1333 aaPredicted RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms