RNA–Protein interactions for RNA: ENST00000555928.5

MEG3-225, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 720 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-225ENST00000555928 ZPR1O75312 459 aa23.5■■□□□ 1.35
MEG3-225ENST00000555928 SOS1Q07889 1333 aaPredicted RBP23.5■■□□□ 1.35
MEG3-225ENST00000555928 SMC1BQ8NDV3 1235 aa23.49■■□□□ 1.35
MEG3-225ENST00000555928 NFIXQ14938 502 aa23.47■■□□□ 1.35
MEG3-225ENST00000555928 COL15A1P39059 1388 aa23.47■■□□□ 1.35
MEG3-225ENST00000555928 MRC1P22897 1456 aa23.47■■□□□ 1.35
MEG3-225ENST00000555928 SLC39A6Q13433 755 aa23.46■■□□□ 1.35
MEG3-225ENST00000555928 MORC1Q86VD1 984 aa23.46■■□□□ 1.35
MEG3-225ENST00000555928 ANKRD31Q8N7Z5 1873 aa23.46■■□□□ 1.35
MEG3-225ENST00000555928 CARMIL3Q8ND23 1372 aa23.46■■□□□ 1.35
MEG3-225ENST00000555928 LGR6Q9HBX8 967 aa23.46■■□□□ 1.35
MEG3-225ENST00000555928 UBR2Q8IWV8 1755 aa23.45■■□□□ 1.34
MEG3-225ENST00000555928 CYP19A1P11511 503 aaPredicted RBP23.45■■□□□ 1.34
MEG3-225ENST00000555928 TNS4Q8IZW8 715 aa23.45■■□□□ 1.34
MEG3-225ENST00000555928 SLC52A2Q9HAB3 445 aa23.45■■□□□ 1.34
MEG3-225ENST00000555928 ZBTB1Q9Y2K1 713 aa23.45■■□□□ 1.34
MEG3-225ENST00000555928 ZC3H4Q9UPT8 1303 aaKnown RBP23.44■■□□□ 1.34
MEG3-225ENST00000555928 LMNB1P20700 586 aa23.44■■□□□ 1.34
MEG3-225ENST00000555928 IL13P35225 146 aa23.44■■□□□ 1.34
MEG3-225ENST00000555928 BCL2L12Q9HB09 334 aa23.44■■□□□ 1.34
MEG3-225ENST00000555928 NARFQ9UHQ1 456 aa23.44■■□□□ 1.34
MEG3-225ENST00000555928 COL11A2P13942 1736 aaPredicted RBP23.43■■□□□ 1.34
MEG3-225ENST00000555928 AKAP4Q5JQC9 854 aa23.43■■□□□ 1.34
MEG3-225ENST00000555928 DICER1Q9UPY3 1922 aaKnown RBP23.42■■□□□ 1.34
MEG3-225ENST00000555928 GLTPD2A6NH11 291 aa23.42■■□□□ 1.34
MEG3-225ENST00000555928 SERPINB2P05120 415 aa23.42■■□□□ 1.34
MEG3-225ENST00000555928 CACNA1SQ13698 1873 aa23.41■■□□□ 1.34
MEG3-225ENST00000555928 VEGFAP15692 232 aaPredicted RBP23.41■■□□□ 1.34
MEG3-225ENST00000555928 NFKBIEO00221 500 aa23.4■■□□□ 1.34
MEG3-225ENST00000555928 HSPA5P11021 654 aaKnown RBP23.4■■□□□ 1.34
MEG3-225ENST00000555928 C2CD5Q86YS7 1000 aa23.4■■□□□ 1.34
MEG3-225ENST00000555928 TTLL6Q8N841 843 aa23.4■■□□□ 1.34
MEG3-225ENST00000555928 FER1L6Q2WGJ9 1857 aa23.4■■□□□ 1.34
MEG3-225ENST00000555928 SCN7AQ01118 1682 aa23.39■■□□□ 1.34
MEG3-225ENST00000555928 RNMTO43148 476 aaKnown RBP23.39■■□□□ 1.33
MEG3-225ENST00000555928 HSPA1AP0DMV8 641 aaKnown RBP23.38■■□□□ 1.33
MEG3-225ENST00000555928 HSPA1BP0DMV9 641 aaKnown RBP23.38■■□□□ 1.33
MEG3-225ENST00000555928 BICDL1Q6ZP65 573 aa23.38■■□□□ 1.33
MEG3-225ENST00000555928 TIMELESSQ9UNS1 1208 aa23.38■■□□□ 1.33
MEG3-225ENST00000555928 POTECB2RU33 542 aa23.37■■□□□ 1.33
MEG3-225ENST00000555928 HMOX1P09601 288 aa23.37■■□□□ 1.33
MEG3-225ENST00000555928 CANXP27824 592 aaKnown RBP23.37■■□□□ 1.33
MEG3-225ENST00000555928 H0YIN7 160 aa23.35■■□□□ 1.33
MEG3-225ENST00000555928 EIF4G2P78344 907 aaKnown RBP eCLIP23.35■■□□□ 1.33
MEG3-225ENST00000555928 ZNF219Q9P2Y4 722 aaPredicted RBP23.35■■□□□ 1.33
MEG3-225ENST00000555928 TRIM26Q12899 539 aaPredicted RBP23.33■■□□□ 1.33
MEG3-225ENST00000555928 MTHFSDQ2M296 383 aaKnown RBP23.33■■□□□ 1.33
MEG3-225ENST00000555928 CCDC24Q8N4L8 307 aa23.33■■□□□ 1.33
MEG3-225ENST00000555928 SIPA1L3O60292 1781 aaPredicted RBP23.32■■□□□ 1.32
MEG3-225ENST00000555928 KNSTRNQ9Y448 316 aa23.32■■□□□ 1.32
MEG3-225ENST00000555928 SLX4Q8IY92 1834 aa23.31■■□□□ 1.32
MEG3-225ENST00000555928 TBC1D9BQ66K14 1250 aa23.31■■□□□ 1.32
MEG3-225ENST00000555928 VSIG10Q8N0Z9 540 aa23.31■■□□□ 1.32
MEG3-225ENST00000555928 ZNF622Q969S3 477 aaKnown RBP eCLIP23.31■■□□□ 1.32
MEG3-225ENST00000555928 ARFGEF2Q9Y6D5 1785 aa23.3■■□□□ 1.32
MEG3-225ENST00000555928 C21orf2O43822 256 aa23.3■■□□□ 1.32
MEG3-225ENST00000555928 EIF5P55010 431 aaKnown RBP23.3■■□□□ 1.32
MEG3-225ENST00000555928 BCORQ6W2J9 1755 aa23.28■■□□□ 1.32
MEG3-225ENST00000555928 POTEIP0CG38 1075 aa23.28■■□□□ 1.32
MEG3-225ENST00000555928 POTEJP0CG39 1038 aa23.28■■□□□ 1.32
MEG3-225ENST00000555928 ERFEQ4G0M1 354 aa23.28■■□□□ 1.32
MEG3-225ENST00000555928 AMER1Q5JTC6 1135 aaPredicted RBP23.28■■□□□ 1.32
MEG3-225ENST00000555928 DPY19L2Q6NUT2 758 aa23.28■■□□□ 1.32
MEG3-225ENST00000555928 ZNF330Q9Y3S2 320 aaPredicted RBP23.28■■□□□ 1.32
MEG3-225ENST00000555928 PRR5LQ6MZQ0 368 aa23.27■■□□□ 1.32
MEG3-225ENST00000555928 TTC5Q8N0Z6 440 aa23.26■■□□□ 1.31
MEG3-225ENST00000555928 TBC1D2BQ9UPU7 963 aa23.26■■□□□ 1.31
MEG3-225ENST00000555928 STARD3NLO95772 234 aa23.25■■□□□ 1.31
MEG3-225ENST00000555928 ZNF496Q96IT1 587 aaPredicted RBP23.25■■□□□ 1.31
MEG3-225ENST00000555928 BRIP1Q9BX63 1249 aa23.25■■□□□ 1.31
MEG3-225ENST00000555928 MKRN1Q9UHC7 482 aaKnown RBP23.25■■□□□ 1.31
MEG3-225ENST00000555928 A0A087WZG4 1122 aa23.24■■□□□ 1.31
MEG3-225ENST00000555928 PDE6BP35913 854 aa23.24■■□□□ 1.31
MEG3-225ENST00000555928 DDNO94850 711 aaPredicted RBP23.23■■□□□ 1.31
MEG3-225ENST00000555928 CHADLQ6NUI6 762 aa23.23■■□□□ 1.31
MEG3-225ENST00000555928 PCGF6Q9BYE7 350 aa23.23■■□□□ 1.31
MEG3-225ENST00000555928 HEG1Q9ULI3 1381 aa23.23■■□□□ 1.31
MEG3-225ENST00000555928 TAOK3Q9H2K8 898 aa23.22■■□□□ 1.31
MEG3-225ENST00000555928 CREBZFQ9NS37 354 aa23.22■■□□□ 1.31
MEG3-225ENST00000555928 DIAPH1O60610 1272 aaKnown RBP23.21■■□□□ 1.31
MEG3-225ENST00000555928 CLSPNQ9HAW4 1339 aa23.21■■□□□ 1.31
MEG3-225ENST00000555928 SCN4AP35499 1836 aa23.21■■□□□ 1.31
MEG3-225ENST00000555928 COL3A1P02461 1466 aaPredicted RBP23.2■■□□□ 1.3
MEG3-225ENST00000555928 LTBP3Q9NS15 1303 aa23.2■■□□□ 1.3
MEG3-225ENST00000555928 ZNF790Q6PG37 636 aa23.2■■□□□ 1.3
MEG3-225ENST00000555928 PRPF40BQ6NWY9 871 aaKnown RBP23.19■■□□□ 1.3
MEG3-225ENST00000555928 CNBD1Q8NA66 436 aa23.19■■□□□ 1.3
MEG3-225ENST00000555928 IL17REQ8NFR9 667 aa23.19■■□□□ 1.3
MEG3-225ENST00000555928 PDZRN3Q9UPQ7 1066 aa23.19■■□□□ 1.3
MEG3-225ENST00000555928 A1BGP04217 495 aa23.18■■□□□ 1.3
MEG3-225ENST00000555928 IL6STP40189 918 aaPredicted RBP23.18■■□□□ 1.3
MEG3-225ENST00000555928 TEFQ10587 303 aa23.18■■□□□ 1.3
MEG3-225ENST00000555928 NPHP1O15259 732 aa23.17■■□□□ 1.3
MEG3-225ENST00000555928 CAMTA2O94983 1202 aa23.17■■□□□ 1.3
MEG3-225ENST00000555928 CC2D1BQ5T0F9 858 aaKnown RBP23.17■■□□□ 1.3
MEG3-225ENST00000555928 FOXN1O15353 648 aa23.16■■□□□ 1.3
MEG3-225ENST00000555928 SRGNP10124 158 aa23.16■■□□□ 1.3
MEG3-225ENST00000555928 CNKSR1Q969H4 720 aa23.16■■□□□ 1.3
MEG3-225ENST00000555928 SETDB2Q96T68 719 aa23.16■■□□□ 1.3
MEG3-225ENST00000555928 CNTNAP1P78357 1384 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms