RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 GTF2E1P29083 439 aaPredicted RBP6.09□□□□□ -1.43
SRP54-209ENST00000555746 NOS2P35228 1153 aa6.09□□□□□ -1.43
SRP54-209ENST00000555746 TBCELQ5QJ74 424 aa6.09□□□□□ -1.43
SRP54-209ENST00000555746 TMEM214Q6NUQ4 689 aaKnown RBP6.09□□□□□ -1.43
SRP54-209ENST00000555746 ZFP42Q96MM3 310 aa6.09□□□□□ -1.43
SRP54-209ENST00000555746 NIFKQ9BYG3 293 aaKnown RBP6.09□□□□□ -1.43
SRP54-209ENST00000555746 ATP13A2Q9NQ11 1180 aa6.09□□□□□ -1.43
SRP54-209ENST00000555746 CHMP3Q9Y3E7 222 aa6.09□□□□□ -1.43
SRP54-209ENST00000555746 IVNS1ABPQ9Y6Y0 642 aa6.09□□□□□ -1.43
SRP54-209ENST00000555746 SERTM1A2A2V5 107 aa6.08□□□□□ -1.44
SRP54-209ENST00000555746 TTLL8A6PVC2 850 aa6.08□□□□□ -1.44
SRP54-209ENST00000555746 ST8SIA5O15466 376 aa6.08□□□□□ -1.44
SRP54-209ENST00000555746 SCNN1AP37088 669 aa6.08□□□□□ -1.44
SRP54-209ENST00000555746 C4orf17Q53FE4 359 aa6.08□□□□□ -1.44
SRP54-209ENST00000555746 GNASQ5JWF2 1037 aa6.08□□□□□ -1.44
SRP54-209ENST00000555746 LYSMD3Q7Z3D4 306 aa6.08□□□□□ -1.44
SRP54-209ENST00000555746 L3MBTL2Q969R5 705 aa6.08□□□□□ -1.44
SRP54-209ENST00000555746 MYO19Q96H55 970 aa6.08□□□□□ -1.44
SRP54-209ENST00000555746 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.08□□□□□ -1.44
SRP54-209ENST00000555746 CABP1Q9NZU7 370 aa6.08□□□□□ -1.44
SRP54-209ENST00000555746 EGFL7Q9UHF1 273 aa6.08□□□□□ -1.44
SRP54-209ENST00000555746 CAPN12Q6ZSI9 719 aa6.07□□□□□ -1.44
SRP54-209ENST00000555746 CHMP7Q8WUX9 453 aaPredicted RBP6.07□□□□□ -1.44
SRP54-209ENST00000555746 SEPT3Q9UH03 358 aa6.07□□□□□ -1.44
SRP54-209ENST00000555746 SERPINB4P48594 390 aa6.06□□□□□ -1.44
SRP54-209ENST00000555746 SH3PXD2AQ5TCZ1 1133 aa6.06□□□□□ -1.44
SRP54-209ENST00000555746 C1orf53Q5VUE5 145 aa6.06□□□□□ -1.44
SRP54-209ENST00000555746 NBPF10Q6P3W6 841 aaKnown RBP6.06□□□□□ -1.44
SRP54-209ENST00000555746 PRICKLE2Q7Z3G6 844 aa6.06□□□□□ -1.44
SRP54-209ENST00000555746 VTI1AQ96AJ9 217 aa6.06□□□□□ -1.44
SRP54-209ENST00000555746 MKNK1Q9BUB5 465 aa6.06□□□□□ -1.44
SRP54-209ENST00000555746 ZDHHC3Q9NYG2 299 aa6.06□□□□□ -1.44
SRP54-209ENST00000555746 DACH1Q9UI36 760 aa6.06□□□□□ -1.44
SRP54-209ENST00000555746 NISCHQ9Y2I1 1504 aa6.05□□□□□ -1.44
SRP54-209ENST00000555746 POU4F2Q12837 409 aa6.05□□□□□ -1.44
SRP54-209ENST00000555746 C16orf46Q6P387 395 aa6.05□□□□□ -1.44
SRP54-209ENST00000555746 C7orf43Q8WVR3 580 aa6.05□□□□□ -1.44
SRP54-209ENST00000555746 QTRT2Q9H974 415 aaKnown RBP6.05□□□□□ -1.44
SRP54-209ENST00000555746 DNMT3LQ9UJW3 386 aa6.05□□□□□ -1.44
SRP54-209ENST00000555746 SOWAHDA6NJG2 315 aa6.04□□□□□ -1.44
SRP54-209ENST00000555746 NPR3P17342 541 aa6.04□□□□□ -1.44
SRP54-209ENST00000555746 PLA2G4AP47712 749 aa6.04□□□□□ -1.44
SRP54-209ENST00000555746 SF3B2Q13435 895 aaKnown RBP6.04□□□□□ -1.44
SRP54-209ENST00000555746 RTN1Q16799 776 aa6.04□□□□□ -1.44
SRP54-209ENST00000555746 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.04□□□□□ -1.442e-6■■□□□ 13.9
SRP54-209ENST00000555746 SND1Q7KZF4 910 aaKnown RBP eCLIP6.04□□□□□ -1.44
SRP54-209ENST00000555746 ALDH16A1Q8IZ83 802 aa6.04□□□□□ -1.44
SRP54-209ENST00000555746 HELQQ8TDG4 1101 aa6.04□□□□□ -1.44
SRP54-209ENST00000555746 GTF3C2Q8WUA4 911 aaPredicted RBP6.04□□□□□ -1.44
SRP54-209ENST00000555746 KIFC2Q96AC6 838 aa6.04□□□□□ -1.44
SRP54-209ENST00000555746 GZF1Q9H116 711 aaPredicted RBP6.04□□□□□ -1.44
SRP54-209ENST00000555746 SENP2Q9HC62 589 aa6.04□□□□□ -1.44
SRP54-209ENST00000555746 ZNF232Q9UNY5 417 aa6.04□□□□□ -1.44
SRP54-209ENST00000555746 GPC6Q9Y625 555 aaPredicted RBP6.04□□□□□ -1.44
SRP54-209ENST00000555746 PARP3Q9Y6F1 533 aa6.04□□□□□ -1.44
SRP54-209ENST00000555746 DNMT3AQ9Y6K1 912 aaPredicted RBP6.04□□□□□ -1.44
SRP54-209ENST00000555746 A0A1B0GTH6 734 aa6.03□□□□□ -1.44
SRP54-209ENST00000555746 FIGNL2A6NMB9 653 aa6.03□□□□□ -1.44
SRP54-209ENST00000555746 ICMTO60725 284 aa6.03□□□□□ -1.44
SRP54-209ENST00000555746 TXLNAP40222 546 aa6.03□□□□□ -1.44
SRP54-209ENST00000555746 NAA30Q147X3 362 aaPredicted RBP6.03□□□□□ -1.44
SRP54-209ENST00000555746 NBPF1Q3BBV0 1214 aa6.03□□□□□ -1.44
SRP54-209ENST00000555746 COX20Q5RI15 118 aa6.03□□□□□ -1.44
SRP54-209ENST00000555746 PHACTR1Q9C0D0 580 aa6.03□□□□□ -1.44
SRP54-209ENST00000555746 SAP130Q9H0E3 1048 aa6.03□□□□□ -1.44
SRP54-209ENST00000555746 HCN4Q9Y3Q4 1203 aa6.03□□□□□ -1.44
SRP54-209ENST00000555746 LCE2BO14633 110 aa6.02□□□□□ -1.45
SRP54-209ENST00000555746 RHOQP17081 205 aa6.02□□□□□ -1.45
SRP54-209ENST00000555746 ATP4AP20648 1035 aa6.02□□□□□ -1.45
SRP54-209ENST00000555746 PHKA2P46019 1235 aa6.02□□□□□ -1.45
SRP54-209ENST00000555746 FKBP4Q02790 459 aaKnown RBP eCLIP6.02□□□□□ -1.45
SRP54-209ENST00000555746 ECM1Q16610 540 aa6.02□□□□□ -1.45
SRP54-209ENST00000555746 TRIM47Q96LD4 638 aa6.02□□□□□ -1.45
SRP54-209ENST00000555746 TIMMDC1Q9NPL8 285 aa6.02□□□□□ -1.45
SRP54-209ENST00000555746 LRFN2Q9ULH4 789 aa6.02□□□□□ -1.45
SRP54-209ENST00000555746 DYRK1BQ9Y463 629 aa6.02□□□□□ -1.45
SRP54-209ENST00000555746 SENP3-EIF4A1A0A087X0R7 540 aa6.01□□□□□ -1.45
SRP54-209ENST00000555746 TNFRSF10BO14763 440 aa6.01□□□□□ -1.45
SRP54-209ENST00000555746 MAN1A2O60476 641 aa6.01□□□□□ -1.45
SRP54-209ENST00000555746 ABL1P00519 1130 aa6.01□□□□□ -1.45
SRP54-209ENST00000555746 TATP17735 454 aaPredicted RBP6.01□□□□□ -1.45
SRP54-209ENST00000555746 C11orf91Q3C1V1 193 aa6.01□□□□□ -1.45
SRP54-209ENST00000555746 PODXL2Q9NZ53 605 aa6.01□□□□□ -1.45
SRP54-209ENST00000555746 SLC35F4A4IF30 521 aa6□□□□□ -1.45
SRP54-209ENST00000555746 H3BRB1 525 aa6□□□□□ -1.45
SRP54-209ENST00000555746 BRD2P25440 801 aaKnown RBP6□□□□□ -1.45
SRP54-209ENST00000555746 MSX1P28360 303 aa6□□□□□ -1.45
SRP54-209ENST00000555746 ZNF211Q13398 564 aaPredicted RBP6□□□□□ -1.45
SRP54-209ENST00000555746 HIF1AQ16665 826 aa6□□□□□ -1.45
SRP54-209ENST00000555746 Q6ZNB5 142 aa6□□□□□ -1.45
SRP54-209ENST00000555746 AIDAQ96BJ3 306 aa6□□□□□ -1.45
SRP54-209ENST00000555746 NGLY1Q96IV0 654 aa6□□□□□ -1.45
SRP54-209ENST00000555746 CRISPLD1Q9H336 500 aa6□□□□□ -1.45
SRP54-209ENST00000555746 TUT1Q9H6E5 874 aaKnown RBP6□□□□□ -1.45
SRP54-209ENST00000555746 STIM2Q9P246 746 aa6□□□□□ -1.45
SRP54-209ENST00000555746 GMPR2Q9P2T1 348 aaKnown RBP6□□□□□ -1.45
SRP54-209ENST00000555746 FAM13AO94988 1023 aa5.99□□□□□ -1.45
SRP54-209ENST00000555746 DGKZQ13574 1117 aa5.99□□□□□ -1.45
SRP54-209ENST00000555746 TMCO4Q5TGY1 634 aa5.99□□□□□ -1.45
SRP54-209ENST00000555746 IER5Q5VY09 327 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms