RNA–Protein interactions for RNA: ENST00000555309.5

HNRNPC-219, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-219ENST00000555309 UBR2Q8IWV8 1755 aa13.29□□□□□ -0.28
HNRNPC-219ENST00000555309 SOS1Q07889 1333 aaPredicted RBP13.29□□□□□ -0.28
HNRNPC-219ENST00000555309 DCAF8L1A6NGE4 600 aa13.28□□□□□ -0.28
HNRNPC-219ENST00000555309 ADRA2BP18089 450 aa13.28□□□□□ -0.28
HNRNPC-219ENST00000555309 USPL1Q5W0Q7 1092 aa13.28□□□□□ -0.28
HNRNPC-219ENST00000555309 RTF1Q92541 710 aaKnown RBP13.28□□□□□ -0.28
HNRNPC-219ENST00000555309 USP16Q9Y5T5 823 aa13.28□□□□□ -0.28
HNRNPC-219ENST00000555309 CICQ96RK0 1608 aaPredicted RBP13.28□□□□□ -0.28
HNRNPC-219ENST00000555309 MYBBP1AQ9BQG0 1328 aaKnown RBP13.28□□□□□ -0.28
HNRNPC-219ENST00000555309 USP42Q9H9J4 1324 aaKnown RBP13.28□□□□□ -0.28
HNRNPC-219ENST00000555309 HEG1Q9ULI3 1381 aa13.28□□□□□ -0.28
HNRNPC-219ENST00000555309 A1BGP04217 495 aa13.27□□□□□ -0.28
HNRNPC-219ENST00000555309 DDR1Q08345 913 aa13.27□□□□□ -0.28
HNRNPC-219ENST00000555309 CCDC146Q8IYE0 955 aa13.27□□□□□ -0.28
HNRNPC-219ENST00000555309 VSIG10Q8N0Z9 540 aa13.27□□□□□ -0.28
HNRNPC-219ENST00000555309 NLGN1Q8N2Q7 840 aa13.27□□□□□ -0.28
HNRNPC-219ENST00000555309 BCL2L12Q9HB09 334 aa13.27□□□□□ -0.28
HNRNPC-219ENST00000555309 CD2APQ9Y5K6 639 aa13.27□□□□□ -0.28
HNRNPC-219ENST00000555309 MRS2Q9HD23 443 aa13.27□□□□□ -0.29
HNRNPC-219ENST00000555309 DLG5Q8TDM6 1919 aa13.26□□□□□ -0.29
HNRNPC-219ENST00000555309 NFE2L2Q16236 605 aa13.26□□□□□ -0.29
HNRNPC-219ENST00000555309 RRP7AQ9Y3A4 280 aaKnown RBP13.26□□□□□ -0.29
HNRNPC-219ENST00000555309 CCDC184Q52MB2 194 aa13.25□□□□□ -0.29
HNRNPC-219ENST00000555309 FMNL2Q96PY5 1086 aa13.25□□□□□ -0.29
HNRNPC-219ENST00000555309 ZNF330Q9Y3S2 320 aaPredicted RBP13.25□□□□□ -0.29
HNRNPC-219ENST00000555309 COL15A1P39059 1388 aa13.25□□□□□ -0.29
HNRNPC-219ENST00000555309 A0A0G2JLW4 131 aa13.25□□□□□ -0.29
HNRNPC-219ENST00000555309 HTATSF1O43719 755 aaKnown RBP13.25□□□□□ -0.29
HNRNPC-219ENST00000555309 EIF5P55010 431 aaKnown RBP13.25□□□□□ -0.29
HNRNPC-219ENST00000555309 TBC1D2BQ9UPU7 963 aa13.25□□□□□ -0.29
HNRNPC-219ENST00000555309 STARD3NLO95772 234 aa13.24□□□□□ -0.29
HNRNPC-219ENST00000555309 TM4SF1P30408 202 aa13.24□□□□□ -0.29
HNRNPC-219ENST00000555309 TAF7Q15545 349 aaPredicted RBP13.24□□□□□ -0.29
HNRNPC-219ENST00000555309 ADAMTS8Q9UP79 889 aa13.24□□□□□ -0.29
HNRNPC-219ENST00000555309 ZPR1O75312 459 aa13.23□□□□□ -0.29
HNRNPC-219ENST00000555309 NEUROD2Q15784 382 aa13.23□□□□□ -0.29
HNRNPC-219ENST00000555309 NARFQ9UHQ1 456 aa13.23□□□□□ -0.29
HNRNPC-219ENST00000555309 PARP3Q9Y6F1 533 aa13.23□□□□□ -0.29
HNRNPC-219ENST00000555309 SENP3-EIF4A1A0A087X0R7 540 aa13.22□□□□□ -0.29
HNRNPC-219ENST00000555309 POLRMTO00411 1230 aaKnown RBP13.22□□□□□ -0.29
HNRNPC-219ENST00000555309 RIPK4P57078 832 aa13.22□□□□□ -0.29
HNRNPC-219ENST00000555309 NFIXQ14938 502 aa13.22□□□□□ -0.29
HNRNPC-219ENST00000555309 BICDL1Q6ZP65 573 aa13.22□□□□□ -0.29
HNRNPC-219ENST00000555309 MAPK8IP3Q9UPT6 1336 aa13.22□□□□□ -0.29
HNRNPC-219ENST00000555309 NBPF26B4DH59 902 aa13.22□□□□□ -0.29
HNRNPC-219ENST00000555309 NEFMP07197 916 aa13.22□□□□□ -0.29
HNRNPC-219ENST00000555309 DPEP1P16444 411 aa13.22□□□□□ -0.29
HNRNPC-219ENST00000555309 TMPOP42166 694 aaKnown RBP13.22□□□□□ -0.29
HNRNPC-219ENST00000555309 NBPF10Q6P3W6 841 aaKnown RBP13.22□□□□□ -0.29
HNRNPC-219ENST00000555309 NBPF15Q8N660 670 aa13.22□□□□□ -0.29
HNRNPC-219ENST00000555309 ZBED9Q6R2W3 1325 aa13.21□□□□□ -0.29
HNRNPC-219ENST00000555309 PXDNLA1KZ92 1463 aa13.21□□□□□ -0.29
HNRNPC-219ENST00000555309 KIAA1551Q9HCM1 1747 aa13.21□□□□□ -0.29
HNRNPC-219ENST00000555309 N4BP2Q86UW6 1770 aaPredicted RBP13.21□□□□□ -0.29
HNRNPC-219ENST00000555309 HNRNPUQ00839 825 aaKnown RBP eCLIP13.21□□□□□ -0.3
HNRNPC-219ENST00000555309 CCDC24Q8N4L8 307 aa13.21□□□□□ -0.3
HNRNPC-219ENST00000555309 C10orf71Q711Q0 1435 aa13.21□□□□□ -0.3
HNRNPC-219ENST00000555309 SNRPA1P09661 255 aaKnown RBP13.2□□□□□ -0.3
HNRNPC-219ENST00000555309 KCNA3P22001 575 aa13.2□□□□□ -0.3
HNRNPC-219ENST00000555309 TEX13AQ9BXU3 409 aaPredicted RBP13.2□□□□□ -0.3
HNRNPC-219ENST00000555309 CHRNA5P30532 468 aa13.19□□□□□ -0.3
HNRNPC-219ENST00000555309 TBC1D9BQ66K14 1250 aa13.19□□□□□ -0.3
HNRNPC-219ENST00000555309 IL6STP40189 918 aaPredicted RBP13.19□□□□□ -0.3
HNRNPC-219ENST00000555309 EIF4A1P60842 406 aaKnown RBP13.19□□□□□ -0.3
HNRNPC-219ENST00000555309 WDR43Q15061 677 aaKnown RBP eCLIP13.19□□□□□ -0.3
HNRNPC-219ENST00000555309 ZNF784Q8NCA9 323 aaPredicted RBP13.19□□□□□ -0.3
HNRNPC-219ENST00000555309 TRIM35Q9UPQ4 493 aa13.19□□□□□ -0.3
HNRNPC-219ENST00000555309 KIF13BQ9NQT8 1826 aa13.18□□□□□ -0.3
HNRNPC-219ENST00000555309 CAMTA2O94983 1202 aa13.18□□□□□ -0.3
HNRNPC-219ENST00000555309 SERPINB2P05120 415 aa13.18□□□□□ -0.3
HNRNPC-219ENST00000555309 PNISRQ8TF01 805 aaKnown RBP13.18□□□□□ -0.3
HNRNPC-219ENST00000555309 PNNQ9H307 717 aaKnown RBP13.18□□□□□ -0.3
HNRNPC-219ENST00000555309 CARMIL3Q8ND23 1372 aa13.17□□□□□ -0.3
HNRNPC-219ENST00000555309 GIGYF1O75420 1035 aaPredicted RBP13.17□□□□□ -0.3
HNRNPC-219ENST00000555309 TGFB2P61812 414 aa13.17□□□□□ -0.3
HNRNPC-219ENST00000555309 NGEFQ8N5V2 710 aa13.17□□□□□ -0.3
HNRNPC-219ENST00000555309 RUNDC1Q96C34 613 aa13.17□□□□□ -0.3
HNRNPC-219ENST00000555309 CHD4Q14839 1912 aa13.17□□□□□ -0.3
HNRNPC-219ENST00000555309 KDM3BQ7LBC6 1761 aa13.17□□□□□ -0.3
HNRNPC-219ENST00000555309 GRIN3BO60391 1043 aa13.16□□□□□ -0.3
HNRNPC-219ENST00000555309 KRT24Q2M2I5 525 aa13.16□□□□□ -0.3
HNRNPC-219ENST00000555309 DZIP3Q86Y13 1208 aaKnown RBP13.16□□□□□ -0.3
HNRNPC-219ENST00000555309 BCS1LQ9Y276 419 aa13.16□□□□□ -0.3
HNRNPC-219ENST00000555309 AFDNP55196 1824 aaKnown RBP13.16□□□□□ -0.3
HNRNPC-219ENST00000555309 A0A087WZG4 1122 aa13.16□□□□□ -0.3
HNRNPC-219ENST00000555309 TSPYL4Q9UJ04 414 aa13.16□□□□□ -0.3
HNRNPC-219ENST00000555309 FAM9BQ8IZU0 186 aa13.15□□□□□ -0.3
HNRNPC-219ENST00000555309 APAF1O14727 1248 aa13.14□□□□□ -0.31
HNRNPC-219ENST00000555309 HLFQ16534 295 aa13.14□□□□□ -0.31
HNRNPC-219ENST00000555309 LAS1LQ9Y4W2 734 aaKnown RBP13.14□□□□□ -0.31
HNRNPC-219ENST00000555309 ANXA1P04083 346 aa13.13□□□□□ -0.31
HNRNPC-219ENST00000555309 MYL6BP14649 208 aa13.13□□□□□ -0.31
HNRNPC-219ENST00000555309 TTLL7Q6ZT98 887 aa13.13□□□□□ -0.31
HNRNPC-219ENST00000555309 NECTIN2Q92692 538 aa13.13□□□□□ -0.31
HNRNPC-219ENST00000555309 EIF2S2P20042 333 aaKnown RBP13.13□□□□□ -0.31
HNRNPC-219ENST00000555309 PROSER3Q2NL68 480 aa13.13□□□□□ -0.31
HNRNPC-219ENST00000555309 PRR5LQ6MZQ0 368 aa13.13□□□□□ -0.31
HNRNPC-219ENST00000555309 SCN7AQ01118 1682 aa13.13□□□□□ -0.31
HNRNPC-219ENST00000555309 FAM177BA6PVY3 158 aa13.12□□□□□ -0.31
HNRNPC-219ENST00000555309 SUPT16HQ9Y5B9 1047 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms