RNA–Protein interactions for RNA: ENST00000555017.5

SEC23A-208, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-208ENST00000555017 ETNK1Q9HBU6 452 aa4.83□□□□□ -1.64
SEC23A-208ENST00000555017 SENP2Q9HC62 589 aa4.83□□□□□ -1.64
SEC23A-208ENST00000555017 PCDHGA11Q9Y5H2 935 aa4.83□□□□□ -1.64
SEC23A-208ENST00000555017 KIF13AQ9H1H9 1805 aa4.83□□□□□ -1.64
SEC23A-208ENST00000555017 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.82□□□□□ -1.64
SEC23A-208ENST00000555017 ABCC10Q5T3U5 1492 aa4.82□□□□□ -1.64
SEC23A-208ENST00000555017 ASXL2Q76L83 1435 aa4.82□□□□□ -1.64
SEC23A-208ENST00000555017 MTUS2Q5JR59 1369 aa4.82□□□□□ -1.64
SEC23A-208ENST00000555017 PALM3A6NDB9 673 aaPredicted RBP4.82□□□□□ -1.64
SEC23A-208ENST00000555017 USP17L5A8MUK1 530 aa4.82□□□□□ -1.64
SEC23A-208ENST00000555017 ZBTB7BO15156 539 aaPredicted RBP4.82□□□□□ -1.64
SEC23A-208ENST00000555017 MAN1A2O60476 641 aa4.82□□□□□ -1.64
SEC23A-208ENST00000555017 LGR5O75473 907 aa4.82□□□□□ -1.64
SEC23A-208ENST00000555017 UPP2O95045 317 aa4.82□□□□□ -1.64
SEC23A-208ENST00000555017 SCNN1DP51172 638 aa4.82□□□□□ -1.64
SEC23A-208ENST00000555017 PRICKLE2Q7Z3G6 844 aa4.82□□□□□ -1.64
SEC23A-208ENST00000555017 WWC1Q8IX03 1113 aa4.82□□□□□ -1.64
SEC23A-208ENST00000555017 ZSCAN1Q8NBB4 408 aa4.82□□□□□ -1.64
SEC23A-208ENST00000555017 KIFC2Q96AC6 838 aa4.82□□□□□ -1.64
SEC23A-208ENST00000555017 KIAA1024Q9UPX6 916 aa4.82□□□□□ -1.64
SEC23A-208ENST00000555017 HRH3Q9Y5N1 445 aa4.82□□□□□ -1.64
SEC23A-208ENST00000555017 MAP3K1Q13233 1512 aa4.82□□□□□ -1.64
SEC23A-208ENST00000555017 EHBP1L1Q8N3D4 1523 aa4.82□□□□□ -1.64
SEC23A-208ENST00000555017 CCDC18Q5T9S5 1454 aa4.81□□□□□ -1.64
SEC23A-208ENST00000555017 TROQ12816 1431 aaPredicted RBP4.81□□□□□ -1.64
SEC23A-208ENST00000555017 SENP3-EIF4A1A0A087X0R7 540 aa4.81□□□□□ -1.64
SEC23A-208ENST00000555017 USP17L3A6NCW0 530 aa4.81□□□□□ -1.64
SEC23A-208ENST00000555017 USP17L4A6NCW7 530 aa4.81□□□□□ -1.64
SEC23A-208ENST00000555017 PLEKHD1A6NEE1 506 aa4.81□□□□□ -1.64
SEC23A-208ENST00000555017 TMEM229AB2RXF0 380 aa4.81□□□□□ -1.64
SEC23A-208ENST00000555017 RFX1P22670 979 aa4.81□□□□□ -1.64
SEC23A-208ENST00000555017 LORP23490 312 aaPredicted RBP4.81□□□□□ -1.64
SEC23A-208ENST00000555017 CENPCQ03188 943 aa4.81□□□□□ -1.64
SEC23A-208ENST00000555017 POU4F2Q12837 409 aa4.81□□□□□ -1.64
SEC23A-208ENST00000555017 USP4Q13107 963 aa4.81□□□□□ -1.64
SEC23A-208ENST00000555017 FAM50AQ14320 339 aaKnown RBP4.81□□□□□ -1.64
SEC23A-208ENST00000555017 USP17L2Q6R6M4 530 aa4.81□□□□□ -1.64
SEC23A-208ENST00000555017 USP17L1Q7RTZ2 530 aa4.81□□□□□ -1.64
SEC23A-208ENST00000555017 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.81□□□□□ -1.64
SEC23A-208ENST00000555017 GAS2L2Q8NHY3 880 aa4.81□□□□□ -1.64
SEC23A-208ENST00000555017 SERTAD1Q9UHV2 236 aa4.81□□□□□ -1.64
SEC23A-208ENST00000555017 TIMELESSQ9UNS1 1208 aa4.81□□□□□ -1.64
SEC23A-208ENST00000555017 USP3Q9Y6I4 520 aa4.81□□□□□ -1.64
SEC23A-208ENST00000555017 ERBB4Q15303 1308 aa4.8□□□□□ -1.64
SEC23A-208ENST00000555017 TERTO14746 1132 aaKnown RBP4.8□□□□□ -1.64
SEC23A-208ENST00000555017 ATP9BO43861 1147 aa4.8□□□□□ -1.64
SEC23A-208ENST00000555017 MYCP01106 439 aaPredicted RBP4.8□□□□□ -1.64
SEC23A-208ENST00000555017 LMOD1P29536 600 aaPredicted RBP4.8□□□□□ -1.64
SEC23A-208ENST00000555017 PHKA2P46019 1235 aa4.8□□□□□ -1.64
SEC23A-208ENST00000555017 RNF144AP50876 292 aaPredicted RBP4.8□□□□□ -1.64
SEC23A-208ENST00000555017 CLDN10P78369 228 aa4.8□□□□□ -1.64
SEC23A-208ENST00000555017 PTSQ03393 145 aa4.8□□□□□ -1.64
SEC23A-208ENST00000555017 MAP7D1Q3KQU3 841 aa4.8□□□□□ -1.64
SEC23A-208ENST00000555017 CYP2U1Q7Z449 544 aa4.8□□□□□ -1.64
SEC23A-208ENST00000555017 C14orf37Q86TY3 774 aa4.8□□□□□ -1.64
SEC23A-208ENST00000555017 CNKSR1Q969H4 720 aa4.8□□□□□ -1.64
SEC23A-208ENST00000555017 XAGE2Q96GT9 111 aa4.8□□□□□ -1.64
SEC23A-208ENST00000555017 PPP1R12CQ9BZL4 782 aa4.8□□□□□ -1.64
SEC23A-208ENST00000555017 CUEDC1Q9NWM3 386 aaPredicted RBP4.8□□□□□ -1.64
SEC23A-208ENST00000555017 MKRN1Q9UHC7 482 aaKnown RBP4.8□□□□□ -1.64
SEC23A-208ENST00000555017 MAFBQ9Y5Q3 323 aaPredicted RBP4.8□□□□□ -1.64
SEC23A-208ENST00000555017 GPATCH8Q9UKJ3 1502 aaKnown RBP4.8□□□□□ -1.64
SEC23A-208ENST00000555017 MYO5CQ9NQX4 1742 aa4.8□□□□□ -1.64
SEC23A-208ENST00000555017 PTPRKQ15262 1439 aa4.8□□□□□ -1.64
SEC23A-208ENST00000555017 PPRC1Q5VV67 1664 aaKnown RBP4.8□□□□□ -1.64
SEC23A-208ENST00000555017 PTPN23Q9H3S7 1636 aa4.79□□□□□ -1.64
SEC23A-208ENST00000555017 SAMD9LQ8IVG5 1584 aa4.79□□□□□ -1.64
SEC23A-208ENST00000555017 ARHGEF12Q9NZN5 1544 aa4.79□□□□□ -1.64
SEC23A-208ENST00000555017 PPFIA3O75145 1194 aa4.79□□□□□ -1.64
SEC23A-208ENST00000555017 GNRH1P01148 92 aa4.79□□□□□ -1.64
SEC23A-208ENST00000555017 HNRNPMP52272 730 aaKnown RBP eCLIP4.79□□□□□ -1.64
SEC23A-208ENST00000555017 GDF10P55107 478 aa4.79□□□□□ -1.64
SEC23A-208ENST00000555017 GTF2IP78347 998 aa4.79□□□□□ -1.64
SEC23A-208ENST00000555017 TRIM26Q12899 539 aaPredicted RBP4.79□□□□□ -1.64
SEC23A-208ENST00000555017 CLN3Q13286 438 aa4.79□□□□□ -1.64
SEC23A-208ENST00000555017 EML3Q32P44 896 aa4.79□□□□□ -1.64
SEC23A-208ENST00000555017 CFAP70Q5T0N1 1121 aa4.79□□□□□ -1.64
SEC23A-208ENST00000555017 GPR161Q8N6U8 529 aaKnown RBP4.79□□□□□ -1.64
SEC23A-208ENST00000555017 ESYT1Q9BSJ8 1104 aa4.79□□□□□ -1.64
SEC23A-208ENST00000555017 FHDC1Q9C0D6 1143 aaPredicted RBP4.79□□□□□ -1.64
SEC23A-208ENST00000555017 GRIP2Q9C0E4 1043 aa4.79□□□□□ -1.64
SEC23A-208ENST00000555017 ESF1Q9H501 851 aaKnown RBP4.79□□□□□ -1.64
SEC23A-208ENST00000555017 WDR7Q9Y4E6 1490 aa4.79□□□□□ -1.64
SEC23A-208ENST00000555017 MYOM3Q5VTT5 1437 aa4.79□□□□□ -1.64
SEC23A-208ENST00000555017 KDM6BO15054 1643 aa4.79□□□□□ -1.64
SEC23A-208ENST00000555017 PREX2Q70Z35 1606 aa4.79□□□□□ -1.64
SEC23A-208ENST00000555017 CCNB3Q8WWL7 1395 aa4.78□□□□□ -1.64
SEC23A-208ENST00000555017 SLC35F4A4IF30 521 aa4.78□□□□□ -1.64
SEC23A-208ENST00000555017 DKK1O94907 266 aa4.78□□□□□ -1.64
SEC23A-208ENST00000555017 FAM69CQ0P6D2 419 aa4.78□□□□□ -1.64
SEC23A-208ENST00000555017 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.78□□□□□ -1.641e-6■□□□□ 9.5
SEC23A-208ENST00000555017 TBCELQ5QJ74 424 aa4.78□□□□□ -1.64
SEC23A-208ENST00000555017 NFATC2IPQ8NCF5 419 aa4.78□□□□□ -1.64
SEC23A-208ENST00000555017 ZNF592Q92610 1267 aa4.78□□□□□ -1.64
SEC23A-208ENST00000555017 NLRP3Q96P20 1036 aa4.78□□□□□ -1.64
SEC23A-208ENST00000555017 ZNF358Q9NW07 568 aa4.78□□□□□ -1.64
SEC23A-208ENST00000555017 NXF1Q9UBU9 619 aaKnown RBP4.78□□□□□ -1.64
SEC23A-208ENST00000555017 NOD1Q9Y239 953 aa4.78□□□□□ -1.64
SEC23A-208ENST00000555017 ABCA9Q8IUA7 1624 aa4.78□□□□□ -1.64
SEC23A-208ENST00000555017 FGD6Q6ZV73 1430 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms