RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 TSPYL6Q8N831 410 aa21.2■□□□□ 0.98
SPTLC2-203ENST00000554901 LAMB4A4D0S4 1761 aa21.2■□□□□ 0.98
SPTLC2-203ENST00000554901 COL5A3P25940 1745 aaPredicted RBP21.2■□□□□ 0.98
SPTLC2-203ENST00000554901 PRAMEF22A3QJZ6 481 aa21.19■□□□□ 0.98
SPTLC2-203ENST00000554901 LINC00116Q8NCU8 138 aa21.19■□□□□ 0.98
SPTLC2-203ENST00000554901 ELL2O00472 640 aaPredicted RBP21.19■□□□□ 0.98
SPTLC2-203ENST00000554901 VAMP4O75379 141 aa21.19■□□□□ 0.98
SPTLC2-203ENST00000554901 HDGFL1Q5TGJ6 251 aa21.19■□□□□ 0.98
SPTLC2-203ENST00000554901 TAF1LQ8IZX4 1826 aa21.19■□□□□ 0.98
SPTLC2-203ENST00000554901 CRKLP46109 303 aaKnown RBP21.18■□□□□ 0.98
SPTLC2-203ENST00000554901 KCNQ4P56696 695 aa21.18■□□□□ 0.98
SPTLC2-203ENST00000554901 CCDC30Q5VVM6 783 aa21.18■□□□□ 0.98
SPTLC2-203ENST00000554901 CCDC87Q9NVE4 849 aa21.18■□□□□ 0.98
SPTLC2-203ENST00000554901 C4BP0C0L5 1744 aa21.16■□□□□ 0.98
SPTLC2-203ENST00000554901 SOCS7O14512 581 aa21.15■□□□□ 0.98
SPTLC2-203ENST00000554901 EIF2S2P20042 333 aaKnown RBP21.15■□□□□ 0.98
SPTLC2-203ENST00000554901 INTS5Q6P9B9 1019 aaKnown RBP21.15■□□□□ 0.98
SPTLC2-203ENST00000554901 DBF4Q9UBU7 674 aaPredicted RBP21.15■□□□□ 0.98
SPTLC2-203ENST00000554901 NUP188Q5SRE5 1749 aa21.15■□□□□ 0.98
SPTLC2-203ENST00000554901 AK7Q96M32 723 aa21.14■□□□□ 0.98
SPTLC2-203ENST00000554901 AKT1S1Q96B36 256 aa21.14■□□□□ 0.97
SPTLC2-203ENST00000554901 STK31Q9BXU1 1019 aa21.14■□□□□ 0.97
SPTLC2-203ENST00000554901 DDX21Q9NR30 783 aaKnown RBP eCLIP21.14■□□□□ 0.97
SPTLC2-203ENST00000554901 RPS6KA4O75676 772 aa21.13■□□□□ 0.97
SPTLC2-203ENST00000554901 A1BGP04217 495 aa21.13■□□□□ 0.97
SPTLC2-203ENST00000554901 IL6STP40189 918 aaPredicted RBP21.13■□□□□ 0.97
SPTLC2-203ENST00000554901 ALDH1L2Q3SY69 923 aa21.13■□□□□ 0.97
SPTLC2-203ENST00000554901 NBPF14Q5TI25 921 aa21.13■□□□□ 0.97
SPTLC2-203ENST00000554901 ZBTB1Q9Y2K1 713 aa21.13■□□□□ 0.97
SPTLC2-203ENST00000554901 STK32BQ9NY57 414 aa21.12■□□□□ 0.97
SPTLC2-203ENST00000554901 GNPATO15228 680 aa21.11■□□□□ 0.97
SPTLC2-203ENST00000554901 ADRA2BP18089 450 aa21.11■□□□□ 0.97
SPTLC2-203ENST00000554901 PDIA6Q15084 440 aa21.11■□□□□ 0.97
SPTLC2-203ENST00000554901 HYPKQ9NX55 129 aa21.11■□□□□ 0.97
SPTLC2-203ENST00000554901 RTCBQ9Y3I0 505 aaKnown RBP21.11■□□□□ 0.97
SPTLC2-203ENST00000554901 MYH14Q7Z406 1995 aaKnown RBP21.1■□□□□ 0.97
SPTLC2-203ENST00000554901 NBPF26B4DH59 902 aa21.1■□□□□ 0.97
SPTLC2-203ENST00000554901 SSFA2P28290 1259 aa21.1■□□□□ 0.97
SPTLC2-203ENST00000554901 EIF5P55010 431 aaKnown RBP21.1■□□□□ 0.97
SPTLC2-203ENST00000554901 SLC15A2Q16348 729 aa21.1■□□□□ 0.97
SPTLC2-203ENST00000554901 NBPF10Q6P3W6 841 aaKnown RBP21.1■□□□□ 0.97
SPTLC2-203ENST00000554901 NBPF15Q8N660 670 aa21.1■□□□□ 0.97
SPTLC2-203ENST00000554901 FLAD1Q8NFF5 587 aa21.1■□□□□ 0.97
SPTLC2-203ENST00000554901 CHPF2Q9P2E5 772 aa21.1■□□□□ 0.97
SPTLC2-203ENST00000554901 CANXP27824 592 aaKnown RBP21.09■□□□□ 0.97
SPTLC2-203ENST00000554901 NPM2Q86SE8 214 aaKnown RBP21.09■□□□□ 0.97
SPTLC2-203ENST00000554901 NECTIN2Q92692 538 aa21.09■□□□□ 0.97
SPTLC2-203ENST00000554901 ZNF827Q17R98 1081 aa21.09■□□□□ 0.97
SPTLC2-203ENST00000554901 TFCP2L1Q9NZI6 479 aa21.09■□□□□ 0.97
SPTLC2-203ENST00000554901 RARSP54136 660 aaKnown RBP21.08■□□□□ 0.96
SPTLC2-203ENST00000554901 BRPF1P55201 1214 aaPredicted RBP21.08■□□□□ 0.96
SPTLC2-203ENST00000554901 LRP10Q7Z4F1 713 aa21.08■□□□□ 0.96
SPTLC2-203ENST00000554901 ANO8Q9HCE9 1232 aaPredicted RBP21.08■□□□□ 0.96
SPTLC2-203ENST00000554901 A0A087WZG4 1122 aa21.07■□□□□ 0.96
SPTLC2-203ENST00000554901 CACNA1FO60840 1977 aa21.07■□□□□ 0.96
SPTLC2-203ENST00000554901 SLC4A2P04920 1241 aa21.06■□□□□ 0.96
SPTLC2-203ENST00000554901 SSH1Q8WYL5 1049 aa21.06■□□□□ 0.96
SPTLC2-203ENST00000554901 UBR3Q6ZT12 1888 aa21.06■□□□□ 0.96
SPTLC2-203ENST00000554901 COL15A1P39059 1388 aa21.06■□□□□ 0.96
SPTLC2-203ENST00000554901 MYL6BP14649 208 aa21.05■□□□□ 0.96
SPTLC2-203ENST00000554901 PROSER3Q2NL68 480 aa21.05■□□□□ 0.96
SPTLC2-203ENST00000554901 TRAPPC3LQ5T215 181 aa21.05■□□□□ 0.96
SPTLC2-203ENST00000554901 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.04■□□□□ 0.96
SPTLC2-203ENST00000554901 RGL2O15211 777 aa21.04■□□□□ 0.96
SPTLC2-203ENST00000554901 SMC4Q9NTJ3 1288 aa21.04■□□□□ 0.96
SPTLC2-203ENST00000554901 QSER1Q2KHR3 1735 aa21.04■□□□□ 0.96
SPTLC2-203ENST00000554901 PIP4K2AP48426 406 aaPredicted RBP21.04■□□□□ 0.96
SPTLC2-203ENST00000554901 MRPL50Q8N5N7 158 aaKnown RBP21.04■□□□□ 0.96
SPTLC2-203ENST00000554901 ANXA1P04083 346 aa21.03■□□□□ 0.96
SPTLC2-203ENST00000554901 RCAN3Q9UKA8 241 aa21.03■□□□□ 0.96
SPTLC2-203ENST00000554901 TCERG1O14776 1098 aaKnown RBP21.02■□□□□ 0.96
SPTLC2-203ENST00000554901 AMIGO3Q86WK7 504 aa21.02■□□□□ 0.96
SPTLC2-203ENST00000554901 ARHGEF1Q92888 912 aaKnown RBP21.02■□□□□ 0.96
SPTLC2-203ENST00000554901 ZNF330Q9Y3S2 320 aaPredicted RBP21.02■□□□□ 0.96
SPTLC2-203ENST00000554901 PNPLA7Q6ZV29 1317 aa21.01■□□□□ 0.95
SPTLC2-203ENST00000554901 KIF16BQ96L93 1317 aa21.01■□□□□ 0.95
SPTLC2-203ENST00000554901 DDX58O95786 925 aaKnown RBP21.01■□□□□ 0.95
SPTLC2-203ENST00000554901 RFC4P35249 363 aa21.01■□□□□ 0.95
SPTLC2-203ENST00000554901 FLIIQ13045 1269 aa21.01■□□□□ 0.95
SPTLC2-203ENST00000554901 COPS6Q7L5N1 327 aa21.01■□□□□ 0.95
SPTLC2-203ENST00000554901 DZIP3Q86Y13 1208 aaKnown RBP21.01■□□□□ 0.95
SPTLC2-203ENST00000554901 XAGE3Q8WTP9 111 aa21.01■□□□□ 0.95
SPTLC2-203ENST00000554901 ERVV-1B6SEH8 477 aa21■□□□□ 0.95
SPTLC2-203ENST00000554901 PHF14O94880 888 aa21■□□□□ 0.95
SPTLC2-203ENST00000554901 KIF6Q6ZMV9 814 aa21■□□□□ 0.95
SPTLC2-203ENST00000554901 PHAXQ9H814 394 aaKnown RBP21■□□□□ 0.95
SPTLC2-203ENST00000554901 NARFQ9UHQ1 456 aa21■□□□□ 0.95
SPTLC2-203ENST00000554901 PTPRCP08575 1304 aa21■□□□□ 0.95
SPTLC2-203ENST00000554901 TUBGCP6Q96RT7 1819 aa20.99■□□□□ 0.95
SPTLC2-203ENST00000554901 ZPR1O75312 459 aa20.99■□□□□ 0.95
SPTLC2-203ENST00000554901 COL23A1Q86Y22 540 aaPredicted RBP20.99■□□□□ 0.95
SPTLC2-203ENST00000554901 BCL2L13Q9BXK5 485 aa20.99■□□□□ 0.95
SPTLC2-203ENST00000554901 MAP3K15Q6ZN16 1313 aa20.98■□□□□ 0.95
SPTLC2-203ENST00000554901 USP42Q9H9J4 1324 aaKnown RBP20.98■□□□□ 0.95
SPTLC2-203ENST00000554901 AIMP1Q12904 312 aaKnown RBP20.98■□□□□ 0.95
SPTLC2-203ENST00000554901 TTLL7Q6ZT98 887 aa20.98■□□□□ 0.95
SPTLC2-203ENST00000554901 ANKRD13DQ6ZTN6 518 aa20.98■□□□□ 0.95
SPTLC2-203ENST00000554901 G2E3Q7L622 706 aa20.98■□□□□ 0.95
SPTLC2-203ENST00000554901 PLBD2Q8NHP8 589 aa20.98■□□□□ 0.95
SPTLC2-203ENST00000554901 SLC16A10Q8TF71 515 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms