RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 HYPKQ9NX55 129 aa20.22■□□□□ 0.83
PCNX1-209ENST00000554879 SNRPA1P09661 255 aaKnown RBP20.22■□□□□ 0.83
PCNX1-209ENST00000554879 MAP4K4O95819 1239 aaPredicted RBP20.22■□□□□ 0.83
PCNX1-209ENST00000554879 C16orf71Q8IYS4 520 aaPredicted RBP20.22■□□□□ 0.83
PCNX1-209ENST00000554879 XAGE3Q8WTP9 111 aa20.22■□□□□ 0.83
PCNX1-209ENST00000554879 ZBTB3Q9H5J0 574 aa20.22■□□□□ 0.83
PCNX1-209ENST00000554879 CCDC85AQ96PX6 553 aaPredicted RBP20.21■□□□□ 0.83
PCNX1-209ENST00000554879 USP32Q8NFA0 1604 aa20.21■□□□□ 0.83
PCNX1-209ENST00000554879 CWF19L2Q2TBE0 894 aaKnown RBP20.21■□□□□ 0.83
PCNX1-209ENST00000554879 KIF24Q5T7B8 1368 aa20.2■□□□□ 0.82
PCNX1-209ENST00000554879 CDC45O75419 566 aa20.2■□□□□ 0.82
PCNX1-209ENST00000554879 MCCP23508 829 aa20.2■□□□□ 0.82
PCNX1-209ENST00000554879 NUTM1Q86Y26 1132 aa20.2■□□□□ 0.82
PCNX1-209ENST00000554879 PRAMEF22A3QJZ6 481 aa20.2■□□□□ 0.82
PCNX1-209ENST00000554879 GTF2E1P29083 439 aaPredicted RBP20.2■□□□□ 0.82
PCNX1-209ENST00000554879 NUCB1Q02818 461 aa20.2■□□□□ 0.82
PCNX1-209ENST00000554879 INTS3Q68E01 1043 aaKnown RBP20.2■□□□□ 0.82
PCNX1-209ENST00000554879 CLASRPQ8N2M8 674 aaKnown RBP20.2■□□□□ 0.82
PCNX1-209ENST00000554879 ANKRD44Q8N8A2 993 aa20.2■□□□□ 0.82
PCNX1-209ENST00000554879 KIF20BQ96Q89 1820 aa20.19■□□□□ 0.82
PCNX1-209ENST00000554879 ZNF496Q96IT1 587 aaPredicted RBP20.19■□□□□ 0.82
PCNX1-209ENST00000554879 PPP1R42Q7Z4L9 355 aa20.19■□□□□ 0.82
PCNX1-209ENST00000554879 ANO2Q9NQ90 1003 aa20.19■□□□□ 0.82
PCNX1-209ENST00000554879 PHKG2P15735 406 aa20.19■□□□□ 0.82
PCNX1-209ENST00000554879 C8orf34Q49A92 452 aa20.19■□□□□ 0.82
PCNX1-209ENST00000554879 HSP90AB4PQ58FF6 505 aa20.19■□□□□ 0.82
PCNX1-209ENST00000554879 CEP85Q6P2H3 762 aa20.19■□□□□ 0.82
PCNX1-209ENST00000554879 SMC5Q8IY18 1101 aa20.18■□□□□ 0.82
PCNX1-209ENST00000554879 SLC52A2Q9HAB3 445 aa20.18■□□□□ 0.82
PCNX1-209ENST00000554879 ACSBG1Q96GR2 724 aa20.18■□□□□ 0.82
PCNX1-209ENST00000554879 TPRNQ4KMQ1 711 aa20.18■□□□□ 0.82
PCNX1-209ENST00000554879 NEUROD6Q96NK8 337 aa20.17■□□□□ 0.82
PCNX1-209ENST00000554879 C8orf37Q96NL8 207 aa20.17■□□□□ 0.82
PCNX1-209ENST00000554879 PLCD3Q8N3E9 789 aa20.17■□□□□ 0.82
PCNX1-209ENST00000554879 ABCC4O15439 1325 aa20.17■□□□□ 0.82
PCNX1-209ENST00000554879 SEC24BO95487 1268 aa20.16■□□□□ 0.82
PCNX1-209ENST00000554879 KIF6Q6ZMV9 814 aa20.16■□□□□ 0.82
PCNX1-209ENST00000554879 ANKRD13DQ6ZTN6 518 aa20.16■□□□□ 0.82
PCNX1-209ENST00000554879 R3HCC1Q9Y3T6 440 aaKnown RBP20.15■□□□□ 0.82
PCNX1-209ENST00000554879 PTMAP06454 111 aaKnown RBP20.15■□□□□ 0.82
PCNX1-209ENST00000554879 GIGYF1O75420 1035 aaPredicted RBP20.14■□□□□ 0.82
PCNX1-209ENST00000554879 KSR2Q6VAB6 950 aa20.14■□□□□ 0.82
PCNX1-209ENST00000554879 DIAPH3Q9NSV4 1193 aa20.14■□□□□ 0.82
PCNX1-209ENST00000554879 UBE3BQ7Z3V4 1068 aa20.14■□□□□ 0.81
PCNX1-209ENST00000554879 BABAM1Q9NWV8 329 aa20.14■□□□□ 0.81
PCNX1-209ENST00000554879 A0A087WZG4 1122 aa20.14■□□□□ 0.81
PCNX1-209ENST00000554879 PCDH11XQ9BZA7 1347 aa20.14■□□□□ 0.81
PCNX1-209ENST00000554879 PCDH11YQ9BZA8 1340 aa20.14■□□□□ 0.81
PCNX1-209ENST00000554879 USP16Q9Y5T5 823 aa20.13■□□□□ 0.81
PCNX1-209ENST00000554879 PROSER3Q2NL68 480 aa20.13■□□□□ 0.81
PCNX1-209ENST00000554879 STARD3NLO95772 234 aa20.13■□□□□ 0.81
PCNX1-209ENST00000554879 PDCL3Q9H2J4 239 aa20.13■□□□□ 0.81
PCNX1-209ENST00000554879 REC8O95072 547 aa20.12■□□□□ 0.81
PCNX1-209ENST00000554879 TAOK2Q9UL54 1235 aa20.12■□□□□ 0.81
PCNX1-209ENST00000554879 OTUD7AQ8TE49 926 aaPredicted RBP20.12■□□□□ 0.81
PCNX1-209ENST00000554879 PAXIP1Q6ZW49 1069 aaPredicted RBP20.12■□□□□ 0.81
PCNX1-209ENST00000554879 DDX21Q9NR30 783 aaKnown RBP eCLIP20.12■□□□□ 0.81
PCNX1-209ENST00000554879 NBPF7P0C2Y1 421 aaPredicted RBP20.11■□□□□ 0.81
PCNX1-209ENST00000554879 DCTPP1Q9H773 170 aa20.11■□□□□ 0.81
PCNX1-209ENST00000554879 KDRP35968 1356 aa20.11■□□□□ 0.81
PCNX1-209ENST00000554879 ESPNB1AK53 854 aa20.11■□□□□ 0.81
PCNX1-209ENST00000554879 GPTP24298 496 aa20.11■□□□□ 0.81
PCNX1-209ENST00000554879 AACSQ86V21 672 aa20.11■□□□□ 0.81
PCNX1-209ENST00000554879 NAP1L2Q9ULW6 460 aaPredicted RBP20.11■□□□□ 0.81
PCNX1-209ENST00000554879 TNS3Q68CZ2 1445 aa20.1■□□□□ 0.81
PCNX1-209ENST00000554879 SSH2Q76I76 1423 aa20.1■□□□□ 0.81
PCNX1-209ENST00000554879 MX1P20591 662 aa20.1■□□□□ 0.81
PCNX1-209ENST00000554879 DDB1Q16531 1140 aa20.1■□□□□ 0.81
PCNX1-209ENST00000554879 CYP27B1O15528 508 aa20.1■□□□□ 0.81
PCNX1-209ENST00000554879 A1BGP04217 495 aa20.1■□□□□ 0.81
PCNX1-209ENST00000554879 WDR17Q8IZU2 1322 aa20.1■□□□□ 0.81
PCNX1-209ENST00000554879 SHPRHQ149N8 1683 aa20.09■□□□□ 0.81
PCNX1-209ENST00000554879 PA2G4Q9UQ80 394 aaKnown RBP20.09■□□□□ 0.81
PCNX1-209ENST00000554879 PNMA6EA0A0J9YXQ4 647 aa20.09■□□□□ 0.81
PCNX1-209ENST00000554879 PANK2Q9BZ23 570 aa20.09■□□□□ 0.81
PCNX1-209ENST00000554879 ATP8B2P98198 1209 aa20.09■□□□□ 0.81
PCNX1-209ENST00000554879 ERC2O15083 957 aa20.09■□□□□ 0.81
PCNX1-209ENST00000554879 BRPF1P55201 1214 aaPredicted RBP20.09■□□□□ 0.81
PCNX1-209ENST00000554879 TPM2P07951 284 aa20.08■□□□□ 0.81
PCNX1-209ENST00000554879 KIF1BPQ96EK5 621 aa20.08■□□□□ 0.81
PCNX1-209ENST00000554879 GRM8O00222 908 aa20.07■□□□□ 0.8
PCNX1-209ENST00000554879 HOXB7P09629 217 aa20.07■□□□□ 0.8
PCNX1-209ENST00000554879 LINS1Q8NG48 757 aa20.07■□□□□ 0.8
PCNX1-209ENST00000554879 CCDC8Q9H0W5 538 aaPredicted RBP20.07■□□□□ 0.8
PCNX1-209ENST00000554879 BMP2KLQ5H9B9 411 aa20.07■□□□□ 0.8
PCNX1-209ENST00000554879 TBC1D9Q6ZT07 1266 aa20.07■□□□□ 0.8
PCNX1-209ENST00000554879 USP44Q9H0E7 712 aa20.07■□□□□ 0.8
PCNX1-209ENST00000554879 CRB1P82279 1406 aa20.06■□□□□ 0.8
PCNX1-209ENST00000554879 MST1RQ04912 1400 aa20.06■□□□□ 0.8
PCNX1-209ENST00000554879 DNAJC2Q99543 621 aaKnown RBP20.06■□□□□ 0.8
PCNX1-209ENST00000554879 SIRT2Q8IXJ6 389 aa20.05■□□□□ 0.8
PCNX1-209ENST00000554879 ERC1Q8IUD2 1116 aa20.05■□□□□ 0.8
PCNX1-209ENST00000554879 SOS1Q07889 1333 aaPredicted RBP20.05■□□□□ 0.8
PCNX1-209ENST00000554879 ST18O60284 1047 aa20.04■□□□□ 0.8
PCNX1-209ENST00000554879 CNTROBQ8N137 903 aa20.04■□□□□ 0.8
PCNX1-209ENST00000554879 CARD10Q9BWT7 1032 aa20.04■□□□□ 0.8
PCNX1-209ENST00000554879 KNDC1Q76NI1 1749 aa20.04■□□□□ 0.8
PCNX1-209ENST00000554879 FOXD4L5Q5VV16 416 aaPredicted RBP20.04■□□□□ 0.8
PCNX1-209ENST00000554879 FOXD4L4Q8WXT5 416 aaPredicted RBP20.04■□□□□ 0.8
PCNX1-209ENST00000554879 RHPN1Q8TCX5 695 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms