RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 FSHRP23945 695 aa9.37□□□□□ -0.91
SCFD1-212ENST00000554486 TSGA10IPQ3SY00 556 aa9.37□□□□□ -0.91
SCFD1-212ENST00000554486 SETD5Q9C0A6 1442 aa9.37□□□□□ -0.91
SCFD1-212ENST00000554486 ARHGEF40Q8TER5 1519 aa9.36□□□□□ -0.91
SCFD1-212ENST00000554486 DUOX2Q9NRD8 1548 aa9.36□□□□□ -0.91
SCFD1-212ENST00000554486 ESPNB1AK53 854 aa9.36□□□□□ -0.91
SCFD1-212ENST00000554486 GIGYF1O75420 1035 aaPredicted RBP9.36□□□□□ -0.91
SCFD1-212ENST00000554486 ZIC2O95409 532 aaPredicted RBP9.36□□□□□ -0.91
SCFD1-212ENST00000554486 TIMP2P16035 220 aa9.36□□□□□ -0.91
SCFD1-212ENST00000554486 TBC1D9Q6ZT07 1266 aa9.36□□□□□ -0.91
SCFD1-212ENST00000554486 DZIP3Q86Y13 1208 aaKnown RBP9.36□□□□□ -0.91
SCFD1-212ENST00000554486 CCDC116Q8IYX3 515 aa9.36□□□□□ -0.91
SCFD1-212ENST00000554486 KCTD15Q96SI1 283 aaPredicted RBP9.36□□□□□ -0.91
SCFD1-212ENST00000554486 ARID3AQ99856 593 aa9.36□□□□□ -0.91
SCFD1-212ENST00000554486 EMILIN1Q9Y6C2 1016 aa9.36□□□□□ -0.91
SCFD1-212ENST00000554486 A2MP01023 1474 aa9.35□□□□□ -0.91
SCFD1-212ENST00000554486 NR3C2P08235 984 aa9.35□□□□□ -0.91
SCFD1-212ENST00000554486 MCCD1P59942 119 aaPredicted RBP9.35□□□□□ -0.91
SCFD1-212ENST00000554486 DHX9Q08211 1270 aaKnown RBP9.35□□□□□ -0.91
SCFD1-212ENST00000554486 SCARF1Q14162 830 aa9.35□□□□□ -0.91
SCFD1-212ENST00000554486 NBPF20Q3BBV1 942 aa9.35□□□□□ -0.91
SCFD1-212ENST00000554486 CFAP70Q5T0N1 1121 aa9.35□□□□□ -0.91
SCFD1-212ENST00000554486 TRIM47Q96LD4 638 aa9.35□□□□□ -0.91
SCFD1-212ENST00000554486 KLF16Q9BXK1 252 aaPredicted RBP9.35□□□□□ -0.91
SCFD1-212ENST00000554486 PPP1R12CQ9BZL4 782 aa9.35□□□□□ -0.91
SCFD1-212ENST00000554486 SERPINA10Q9UK55 444 aa9.35□□□□□ -0.91
SCFD1-212ENST00000554486 ANKRD50Q9ULJ7 1429 aa9.35□□□□□ -0.91
SCFD1-212ENST00000554486 DHX29Q7Z478 1369 aaKnown RBP9.35□□□□□ -0.91
SCFD1-212ENST00000554486 RAB3GAP2Q9H2M9 1393 aa9.35□□□□□ -0.91
SCFD1-212ENST00000554486 ATP10AO60312 1499 aa9.34□□□□□ -0.91
SCFD1-212ENST00000554486 PALM3A6NDB9 673 aaPredicted RBP9.34□□□□□ -0.91
SCFD1-212ENST00000554486 ZNF592Q92610 1267 aa9.34□□□□□ -0.91
SCFD1-212ENST00000554486 TRIM52Q96A61 297 aa9.34□□□□□ -0.91
SCFD1-212ENST00000554486 PGPEP1Q9NXJ5 209 aa9.34□□□□□ -0.91
SCFD1-212ENST00000554486 TFIP11Q9UBB9 837 aaKnown RBP9.34□□□□□ -0.91
SCFD1-212ENST00000554486 SIGLEC1Q9BZZ2 1709 aa9.34□□□□□ -0.92
SCFD1-212ENST00000554486 REREQ9P2R6 1566 aa9.33□□□□□ -0.92
SCFD1-212ENST00000554486 ERBINQ96RT1 1412 aa9.33□□□□□ -0.92
SCFD1-212ENST00000554486 UPP2O95045 317 aa9.33□□□□□ -0.92
SCFD1-212ENST00000554486 ITPKCQ96DU7 683 aa9.33□□□□□ -0.92
SCFD1-212ENST00000554486 CCDC85AQ96PX6 553 aaPredicted RBP9.33□□□□□ -0.92
SCFD1-212ENST00000554486 BCORL1Q5H9F3 1711 aa9.32□□□□□ -0.92
SCFD1-212ENST00000554486 BMP1P13497 986 aa9.32□□□□□ -0.92
SCFD1-212ENST00000554486 SRPK2P78362 688 aaKnown RBP9.32□□□□□ -0.92
SCFD1-212ENST00000554486 MRPL14Q6P1L8 145 aaKnown RBP9.32□□□□□ -0.92
SCFD1-212ENST00000554486 TRIM46Q7Z4K8 759 aa9.32□□□□□ -0.92
SCFD1-212ENST00000554486 ZNF775Q96BV0 537 aaPredicted RBP9.32□□□□□ -0.92
SCFD1-212ENST00000554486 EIF2AK4Q9P2K8 1649 aaKnown RBP9.31□□□□□ -0.92
SCFD1-212ENST00000554486 CCDC97Q96F63 343 aaPredicted RBP9.31□□□□□ -0.92
SCFD1-212ENST00000554486 ZFAND3Q9H8U3 227 aa9.31□□□□□ -0.92
SCFD1-212ENST00000554486 AGLP35573 1532 aa9.31□□□□□ -0.92
SCFD1-212ENST00000554486 KIF3BO15066 747 aa9.3□□□□□ -0.92
SCFD1-212ENST00000554486 ATP9BO43861 1147 aa9.3□□□□□ -0.92
SCFD1-212ENST00000554486 INTS6LQ5JSJ4 861 aaKnown RBP9.3□□□□□ -0.92
SCFD1-212ENST00000554486 PPP1R26Q5T8A7 1209 aaPredicted RBP9.3□□□□□ -0.92
SCFD1-212ENST00000554486 NFATC2IPQ8NCF5 419 aa9.3□□□□□ -0.92
SCFD1-212ENST00000554486 ZFP42Q96MM3 310 aa9.3□□□□□ -0.92
SCFD1-212ENST00000554486 MAFBQ9Y5Q3 323 aaPredicted RBP9.3□□□□□ -0.92
SCFD1-212ENST00000554486 DEPDC5O75140 1603 aa9.3□□□□□ -0.92
SCFD1-212ENST00000554486 MROH1Q8NDA8 1641 aa9.3□□□□□ -0.92
SCFD1-212ENST00000554486 RNF17Q9BXT8 1623 aaKnown RBP9.3□□□□□ -0.92
SCFD1-212ENST00000554486 UNC13BO14795 1591 aa9.29□□□□□ -0.92
SCFD1-212ENST00000554486 RNF135Q8IUD6 432 aa9.29□□□□□ -0.92
SCFD1-212ENST00000554486 CDCA7Q9BWT1 371 aaPredicted RBP9.29□□□□□ -0.92
SCFD1-212ENST00000554486 SKIP12755 728 aa9.28□□□□□ -0.92
SCFD1-212ENST00000554486 SNRPBP14678 240 aaKnown RBP9.28□□□□□ -0.92
SCFD1-212ENST00000554486 SLFNL1Q499Z3 407 aa9.28□□□□□ -0.92
SCFD1-212ENST00000554486 CCDC125Q86Z20 511 aa9.28□□□□□ -0.92
SCFD1-212ENST00000554486 SEPT12Q8IYM1 358 aa9.28□□□□□ -0.92
SCFD1-212ENST00000554486 PLPP7Q8NBV4 271 aa9.28□□□□□ -0.92
SCFD1-212ENST00000554486 PRDM15P57071 1507 aaPredicted RBP9.27□□□□□ -0.93
SCFD1-212ENST00000554486 KDM5DQ9BY66 1539 aa9.27□□□□□ -0.93
SCFD1-212ENST00000554486 PURBQ96QR8 312 aaKnown RBP9.27□□□□□ -0.93
SCFD1-212ENST00000554486 TSEN34Q9BSV6 310 aaKnown RBP9.27□□□□□ -0.93
SCFD1-212ENST00000554486 VWDEQ8N2E2 1590 aa9.27□□□□□ -0.93
SCFD1-212ENST00000554486 PZPP20742 1482 aa9.27□□□□□ -0.93
SCFD1-212ENST00000554486 NUP155O75694 1391 aa9.26□□□□□ -0.93
SCFD1-212ENST00000554486 USP17L5A8MUK1 530 aa9.26□□□□□ -0.93
SCFD1-212ENST00000554486 ERVH48-1M5A8F1 160 aa9.26□□□□□ -0.93
SCFD1-212ENST00000554486 LMOD1P29536 600 aaPredicted RBP9.26□□□□□ -0.93
SCFD1-212ENST00000554486 DEPDC4Q8N2C3 294 aa9.26□□□□□ -0.93
SCFD1-212ENST00000554486 MEIOBQ8N635 442 aa9.26□□□□□ -0.93
SCFD1-212ENST00000554486 IQGAP3Q86VI3 1631 aa9.26□□□□□ -0.93
SCFD1-212ENST00000554486 USP17L3A6NCW0 530 aa9.25□□□□□ -0.93
SCFD1-212ENST00000554486 USP17L4A6NCW7 530 aa9.25□□□□□ -0.93
SCFD1-212ENST00000554486 BMP2P12643 396 aa9.25□□□□□ -0.93
SCFD1-212ENST00000554486 RFX1P22670 979 aa9.25□□□□□ -0.93
SCFD1-212ENST00000554486 RNF20Q5VTR2 975 aa9.25□□□□□ -0.93
SCFD1-212ENST00000554486 GGT6Q6P531 493 aa9.25□□□□□ -0.93
SCFD1-212ENST00000554486 USP17L2Q6R6M4 530 aa9.25□□□□□ -0.93
SCFD1-212ENST00000554486 USP17L1Q7RTZ2 530 aa9.25□□□□□ -0.93
SCFD1-212ENST00000554486 PLEKHM2Q8IWE5 1019 aa9.25□□□□□ -0.93
SCFD1-212ENST00000554486 ACIN1Q9UKV3 1341 aaKnown RBP9.25□□□□□ -0.93
SCFD1-212ENST00000554486 FAM135AQ9P2D6 1515 aa9.25□□□□□ -0.93
SCFD1-212ENST00000554486 DHX57Q6P158 1386 aaKnown RBP9.24□□□□□ -0.93
SCFD1-212ENST00000554486 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.24□□□□□ -0.93
SCFD1-212ENST00000554486 RAB15P59190 212 aa9.24□□□□□ -0.93
SCFD1-212ENST00000554486 NCOA4Q13772 614 aa9.24□□□□□ -0.93
SCFD1-212ENST00000554486 C6orf118Q5T5N4 469 aa9.24□□□□□ -0.93
SCFD1-212ENST00000554486 LINC00528Q8N1L1 170 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms