RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 TMOD3Q9NYL9 352 aa8.78□□□□□ -1
LINC00517-202ENST00000554257 BCAR3O75815 825 aa8.78□□□□□ -1
LINC00517-202ENST00000554257 FAM196AQ6ZSG2 479 aa8.78□□□□□ -1
LINC00517-202ENST00000554257 TNRC6CQ9HCJ0 1690 aaKnown RBP8.78□□□□□ -1
LINC00517-202ENST00000554257 ADCY9O60503 1353 aa8.77□□□□□ -1
LINC00517-202ENST00000554257 NBPF26B4DH59 902 aa8.77□□□□□ -1.01
LINC00517-202ENST00000554257 TEFQ10587 303 aa8.77□□□□□ -1.01
LINC00517-202ENST00000554257 NBPF14Q5TI25 921 aa8.77□□□□□ -1.01
LINC00517-202ENST00000554257 NBPF10Q6P3W6 841 aaKnown RBP8.77□□□□□ -1.01
LINC00517-202ENST00000554257 NBPF15Q8N660 670 aa8.77□□□□□ -1.01
LINC00517-202ENST00000554257 PROSER3Q2NL68 480 aa8.77□□□□□ -1.01
LINC00517-202ENST00000554257 AMIGO3Q86WK7 504 aa8.77□□□□□ -1.01
LINC00517-202ENST00000554257 LRRC4BQ9NT99 713 aa8.77□□□□□ -1.01
LINC00517-202ENST00000554257 ATP10DQ9P241 1426 aa8.77□□□□□ -1.01
LINC00517-202ENST00000554257 BRCA1P38398 1863 aaKnown RBP8.77□□□□□ -1.01
LINC00517-202ENST00000554257 CYP19A1P11511 503 aaPredicted RBP8.77□□□□□ -1.01
LINC00517-202ENST00000554257 INTS5Q6P9B9 1019 aaKnown RBP8.77□□□□□ -1.01
LINC00517-202ENST00000554257 RCAN3Q9UKA8 241 aa8.77□□□□□ -1.01
LINC00517-202ENST00000554257 USP16Q9Y5T5 823 aa8.77□□□□□ -1.01
LINC00517-202ENST00000554257 SPEF2Q9C093 1822 aa8.76□□□□□ -1.01
LINC00517-202ENST00000554257 TNNQ9UQP3 1299 aa8.76□□□□□ -1.01
LINC00517-202ENST00000554257 COL4A1P02462 1669 aa8.76□□□□□ -1.01
LINC00517-202ENST00000554257 ABCC4O15439 1325 aa8.76□□□□□ -1.01
LINC00517-202ENST00000554257 LINC00116Q8NCU8 138 aa8.76□□□□□ -1.01
LINC00517-202ENST00000554257 FMNL2Q96PY5 1086 aa8.76□□□□□ -1.01
LINC00517-202ENST00000554257 COL11A2P13942 1736 aaPredicted RBP8.76□□□□□ -1.01
LINC00517-202ENST00000554257 ERBB4Q15303 1308 aa8.75□□□□□ -1.01
LINC00517-202ENST00000554257 CNTNAP4Q9C0A0 1308 aa8.75□□□□□ -1.01
LINC00517-202ENST00000554257 LRP5O75197 1615 aa8.75□□□□□ -1.01
LINC00517-202ENST00000554257 PLSCR1O15162 318 aa8.75□□□□□ -1.01
LINC00517-202ENST00000554257 G2E3Q7L622 706 aa8.75□□□□□ -1.01
LINC00517-202ENST00000554257 LAS1LQ9Y4W2 734 aaKnown RBP8.75□□□□□ -1.01
LINC00517-202ENST00000554257 RRP1P56182 461 aaKnown RBP8.75□□□□□ -1.01
LINC00517-202ENST00000554257 SNRPA1P09661 255 aaKnown RBP8.74□□□□□ -1.01
LINC00517-202ENST00000554257 LRRC37AA6NMS7 1700 aa8.74□□□□□ -1.01
LINC00517-202ENST00000554257 LOC102724428A0A0B4J2F2 783 aa8.74□□□□□ -1.01
LINC00517-202ENST00000554257 SIK1P57059 783 aa8.74□□□□□ -1.01
LINC00517-202ENST00000554257 C20orf194Q5TEA3 1177 aa8.74□□□□□ -1.01
LINC00517-202ENST00000554257 CAMKK2Q96RR4 588 aa8.74□□□□□ -1.01
LINC00517-202ENST00000554257 RLBP1P12271 317 aa8.74□□□□□ -1.01
LINC00517-202ENST00000554257 DNAJC10Q8IXB1 793 aa8.73□□□□□ -1.01
LINC00517-202ENST00000554257 ARHGAP45Q92619 1136 aa8.73□□□□□ -1.01
LINC00517-202ENST00000554257 CHPF2Q9P2E5 772 aa8.73□□□□□ -1.01
LINC00517-202ENST00000554257 TRIM37O94972 964 aa8.73□□□□□ -1.01
LINC00517-202ENST00000554257 ZNF646O15015 1829 aaPredicted RBP8.73□□□□□ -1.01
LINC00517-202ENST00000554257 LTBP1Q14766 1721 aa8.73□□□□□ -1.01
LINC00517-202ENST00000554257 ARAP2Q8WZ64 1704 aa8.73□□□□□ -1.01
LINC00517-202ENST00000554257 AKT1S1Q96B36 256 aa8.73□□□□□ -1.01
LINC00517-202ENST00000554257 TAF1P21675 1872 aa8.72□□□□□ -1.01
LINC00517-202ENST00000554257 TRIM27P14373 513 aa8.72□□□□□ -1.01
LINC00517-202ENST00000554257 SMARCC1Q92922 1105 aaPredicted RBP8.72□□□□□ -1.01
LINC00517-202ENST00000554257 PHAXQ9H814 394 aaKnown RBP8.72□□□□□ -1.01
LINC00517-202ENST00000554257 DDX21Q9NR30 783 aaKnown RBP eCLIP8.72□□□□□ -1.01
LINC00517-202ENST00000554257 ELL2O00472 640 aaPredicted RBP8.71□□□□□ -1.01
LINC00517-202ENST00000554257 RC3H1Q5TC82 1133 aaKnown RBP8.71□□□□□ -1.01
LINC00517-202ENST00000554257 PTPRCP08575 1304 aa8.71□□□□□ -1.01
LINC00517-202ENST00000554257 EIF5P55010 431 aaKnown RBP8.71□□□□□ -1.02
LINC00517-202ENST00000554257 NOB1Q9ULX3 412 aaKnown RBP8.71□□□□□ -1.02
LINC00517-202ENST00000554257 SUPT16HQ9Y5B9 1047 aaKnown RBP8.71□□□□□ -1.02
LINC00517-202ENST00000554257 CACNA1SQ13698 1873 aa8.7□□□□□ -1.02
LINC00517-202ENST00000554257 PLIN1O60240 522 aa8.7□□□□□ -1.02
LINC00517-202ENST00000554257 A1BGP04217 495 aa8.7□□□□□ -1.02
LINC00517-202ENST00000554257 CRKLP46109 303 aaKnown RBP8.7□□□□□ -1.02
LINC00517-202ENST00000554257 SLC27A3Q5K4L6 730 aa8.7□□□□□ -1.02
LINC00517-202ENST00000554257 HDGFL1Q5TGJ6 251 aa8.7□□□□□ -1.02
LINC00517-202ENST00000554257 CCDC30Q5VVM6 783 aa8.7□□□□□ -1.02
LINC00517-202ENST00000554257 BCL2L13Q9BXK5 485 aa8.7□□□□□ -1.02
LINC00517-202ENST00000554257 PTCD1O75127 700 aaKnown RBP8.7□□□□□ -1.02
LINC00517-202ENST00000554257 ILDR2Q71H61 639 aa8.7□□□□□ -1.02
LINC00517-202ENST00000554257 TTC5Q8N0Z6 440 aa8.7□□□□□ -1.02
LINC00517-202ENST00000554257 ZBTB1Q9Y2K1 713 aa8.7□□□□□ -1.02
LINC00517-202ENST00000554257 COL15A1P39059 1388 aa8.7□□□□□ -1.02
LINC00517-202ENST00000554257 ANXA1P04083 346 aa8.7□□□□□ -1.02
LINC00517-202ENST00000554257 KCNQ4P56696 695 aa8.7□□□□□ -1.02
LINC00517-202ENST00000554257 ZNF827Q17R98 1081 aa8.7□□□□□ -1.02
LINC00517-202ENST00000554257 DBF4Q9UBU7 674 aaPredicted RBP8.7□□□□□ -1.02
LINC00517-202ENST00000554257 KIF16BQ96L93 1317 aa8.69□□□□□ -1.02
LINC00517-202ENST00000554257 FLIIQ13045 1269 aa8.69□□□□□ -1.02
LINC00517-202ENST00000554257 INTS3Q68E01 1043 aaKnown RBP8.69□□□□□ -1.02
LINC00517-202ENST00000554257 TEX13AQ9BXU3 409 aaPredicted RBP8.69□□□□□ -1.02
LINC00517-202ENST00000554257 UTYO14607 1347 aa8.69□□□□□ -1.02
LINC00517-202ENST00000554257 TCERG1O14776 1098 aaKnown RBP8.69□□□□□ -1.02
LINC00517-202ENST00000554257 CENPBP07199 599 aaPredicted RBP8.69□□□□□ -1.02
LINC00517-202ENST00000554257 PIP4K2AP48426 406 aaPredicted RBP8.69□□□□□ -1.02
LINC00517-202ENST00000554257 ATF7IPQ6VMQ6 1270 aa8.69□□□□□ -1.02
LINC00517-202ENST00000554257 BCL2L12Q9HB09 334 aa8.69□□□□□ -1.02
LINC00517-202ENST00000554257 RGL2O15211 777 aa8.68□□□□□ -1.02
LINC00517-202ENST00000554257 SLC4A2P04920 1241 aa8.68□□□□□ -1.02
LINC00517-202ENST00000554257 ATP6V1AP38606 617 aa8.68□□□□□ -1.02
LINC00517-202ENST00000554257 IL6STP40189 918 aaPredicted RBP8.68□□□□□ -1.02
LINC00517-202ENST00000554257 PDE3AQ14432 1141 aa8.68□□□□□ -1.02
LINC00517-202ENST00000554257 SYTL4Q96C24 671 aaPredicted RBP8.68□□□□□ -1.02
LINC00517-202ENST00000554257 TXNRD1Q16881 649 aa8.68□□□□□ -1.02
LINC00517-202ENST00000554257 SMC4Q9NTJ3 1288 aa8.68□□□□□ -1.02
LINC00517-202ENST00000554257 HYPKQ9NX55 129 aa8.68□□□□□ -1.02
LINC00517-202ENST00000554257 CAMTA2O94983 1202 aa8.68□□□□□ -1.02
LINC00517-202ENST00000554257 CASP7P55210 303 aa8.68□□□□□ -1.02
LINC00517-202ENST00000554257 BEND3Q5T5X7 828 aa8.68□□□□□ -1.02
LINC00517-202ENST00000554257 TTLL7Q6ZT98 887 aa8.68□□□□□ -1.02
LINC00517-202ENST00000554257 CCDC87Q9NVE4 849 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms