RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 PRG4Q92954 1404 aaPredicted RBP5.8□□□□□ -1.48
SLIRP-202ENST00000553981 ADCY10Q96PN6 1610 aa5.79□□□□□ -1.48
SLIRP-202ENST00000553981 SLC24A1O60721 1099 aa5.79□□□□□ -1.48
SLIRP-202ENST00000553981 STAU1O95793 577 aaKnown RBP5.79□□□□□ -1.48
SLIRP-202ENST00000553981 MAP2K3P46734 347 aa5.79□□□□□ -1.48
SLIRP-202ENST00000553981 UBAP2LQ14157 1087 aaKnown RBP5.79□□□□□ -1.48
SLIRP-202ENST00000553981 C4orf17Q53FE4 359 aa5.79□□□□□ -1.48
SLIRP-202ENST00000553981 TMEM214Q6NUQ4 689 aaKnown RBP5.79□□□□□ -1.48
SLIRP-202ENST00000553981 PHTF2Q8N3S3 785 aa5.79□□□□□ -1.48
SLIRP-202ENST00000553981 ABCC10Q5T3U5 1492 aa5.78□□□□□ -1.48
SLIRP-202ENST00000553981 GTF2E1P29083 439 aaPredicted RBP5.78□□□□□ -1.48
SLIRP-202ENST00000553981 LBRQ14739 615 aaKnown RBP5.78□□□□□ -1.48
SLIRP-202ENST00000553981 ESCO1Q5FWF5 840 aa5.78□□□□□ -1.48
SLIRP-202ENST00000553981 GNASQ5JWF2 1037 aa5.78□□□□□ -1.48
SLIRP-202ENST00000553981 KLRG1Q96E93 195 aa5.78□□□□□ -1.48
SLIRP-202ENST00000553981 RUBCNLQ9H714 662 aa5.78□□□□□ -1.48
SLIRP-202ENST00000553981 DIP2BQ9P265 1576 aa5.78□□□□□ -1.48
SLIRP-202ENST00000553981 DOLKQ9UPQ8 538 aa5.78□□□□□ -1.48
SLIRP-202ENST00000553981 RUSC2Q8N2Y8 1516 aa5.78□□□□□ -1.48
SLIRP-202ENST00000553981 WRNQ14191 1432 aaPredicted RBP eCLIP5.77□□□□□ -1.49
SLIRP-202ENST00000553981 SHISA8B8ZZ34 492 aa5.77□□□□□ -1.49
SLIRP-202ENST00000553981 SUPT5HO00267 1087 aaKnown RBP5.77□□□□□ -1.49
SLIRP-202ENST00000553981 MSTNO14793 375 aa5.77□□□□□ -1.49
SLIRP-202ENST00000553981 MSX1P28360 303 aa5.77□□□□□ -1.49
SLIRP-202ENST00000553981 SNRPNP63162 240 aaKnown RBP5.77□□□□□ -1.49
SLIRP-202ENST00000553981 EIF4G2P78344 907 aaKnown RBP eCLIP5.77□□□□□ -1.49
SLIRP-202ENST00000553981 FAM69CQ0P6D2 419 aa5.77□□□□□ -1.49
SLIRP-202ENST00000553981 USP4Q13107 963 aa5.77□□□□□ -1.49
SLIRP-202ENST00000553981 IRF5Q13568 498 aa5.77□□□□□ -1.49
SLIRP-202ENST00000553981 C1orf229Q6ZS94 237 aaPredicted RBP5.77□□□□□ -1.49
SLIRP-202ENST00000553981 SPOCK3Q9BQ16 436 aa5.77□□□□□ -1.49
SLIRP-202ENST00000553981 ETNK1Q9HBU6 452 aa5.77□□□□□ -1.49
SLIRP-202ENST00000553981 PHF24Q9UPV7 400 aa5.77□□□□□ -1.49
SLIRP-202ENST00000553981 ERICH3Q5RHP9 1530 aa5.77□□□□□ -1.49
SLIRP-202ENST00000553981 CSB-PGBD3P0DP91 1061 aa5.76□□□□□ -1.49
SLIRP-202ENST00000553981 SLFNL1Q499Z3 407 aa5.76□□□□□ -1.49
SLIRP-202ENST00000553981 PPARGC1BQ86YN6 1023 aaKnown RBP5.76□□□□□ -1.49
SLIRP-202ENST00000553981 RNF135Q8IUD6 432 aa5.76□□□□□ -1.49
SLIRP-202ENST00000553981 PGBD3Q8N328 593 aa5.76□□□□□ -1.49
SLIRP-202ENST00000553981 GALNT6Q8NCL4 622 aa5.76□□□□□ -1.49
SLIRP-202ENST00000553981 RHBDD1Q8TEB9 315 aa5.76□□□□□ -1.49
SLIRP-202ENST00000553981 CHIC2Q9UKJ5 165 aa5.76□□□□□ -1.49
SLIRP-202ENST00000553981 COL17A1Q9UMD9 1497 aaPredicted RBP5.76□□□□□ -1.49
SLIRP-202ENST00000553981 PPRC1Q5VV67 1664 aaKnown RBP5.75□□□□□ -1.49
SLIRP-202ENST00000553981 PROCP04070 461 aa5.75□□□□□ -1.49
SLIRP-202ENST00000553981 TLR1Q15399 786 aa5.75□□□□□ -1.49
SLIRP-202ENST00000553981 OXLD1Q5BKU9 147 aa5.75□□□□□ -1.49
SLIRP-202ENST00000553981 EFHC2Q5JST6 749 aa5.75□□□□□ -1.49
SLIRP-202ENST00000553981 ABHD17AQ96GS6 310 aa5.75□□□□□ -1.49
SLIRP-202ENST00000553981 NDFIP2Q9NV92 336 aa5.75□□□□□ -1.49
SLIRP-202ENST00000553981 GDF2Q9UK05 429 aaPredicted RBP5.75□□□□□ -1.49
SLIRP-202ENST00000553981 ATXN7L1Q9ULK2 861 aaPredicted RBP5.75□□□□□ -1.49
SLIRP-202ENST00000553981 TSPOAP1O95153 1857 aa5.75□□□□□ -1.49
SLIRP-202ENST00000553981 MAPKBP1O60336 1514 aa5.74□□□□□ -1.49
SLIRP-202ENST00000553981 C2CD2LO14523 706 aa5.74□□□□□ -1.49
SLIRP-202ENST00000553981 BNIP3LO60238 219 aa5.74□□□□□ -1.49
SLIRP-202ENST00000553981 FGFR3P22607 806 aa5.74□□□□□ -1.49
SLIRP-202ENST00000553981 SCNN1DP51172 638 aa5.74□□□□□ -1.49
SLIRP-202ENST00000553981 VAC14Q08AM6 782 aa5.74□□□□□ -1.49
SLIRP-202ENST00000553981 GOLGA6L1Q8N7Z2 621 aa5.74□□□□□ -1.49
SLIRP-202ENST00000553981 EDARADDQ8WWZ3 215 aa5.74□□□□□ -1.49
SLIRP-202ENST00000553981 CRISPLD1Q9H336 500 aa5.74□□□□□ -1.49
SLIRP-202ENST00000553981 PRM3Q9NNZ6 103 aa5.74□□□□□ -1.49
SLIRP-202ENST00000553981 BMP4P12644 408 aa5.73□□□□□ -1.49
SLIRP-202ENST00000553981 PLA2G4AP47712 749 aa5.73□□□□□ -1.49
SLIRP-202ENST00000553981 GDF10P55107 478 aa5.73□□□□□ -1.49
SLIRP-202ENST00000553981 CTBSQ01459 385 aa5.73□□□□□ -1.49
SLIRP-202ENST00000553981 SIRT1Q96EB6 747 aa5.73□□□□□ -1.49
SLIRP-202ENST00000553981 MKL2Q9ULH7 1088 aa5.73□□□□□ -1.49
SLIRP-202ENST00000553981 KRBA1A5PL33 1030 aa5.72□□□□□ -1.49
SLIRP-202ENST00000553981 ADAM23O75077 832 aa5.72□□□□□ -1.49
SLIRP-202ENST00000553981 INHAP05111 366 aa5.72□□□□□ -1.49
SLIRP-202ENST00000553981 HOXB4P17483 251 aaPredicted RBP5.72□□□□□ -1.49
SLIRP-202ENST00000553981 COL8A1P27658 744 aa5.72□□□□□ -1.49
SLIRP-202ENST00000553981 TBC1D9Q6ZT07 1266 aa5.72□□□□□ -1.49
SLIRP-202ENST00000553981 RRAGCQ9HB90 399 aa5.72□□□□□ -1.49
SLIRP-202ENST00000553981 DNAAF2Q9NVR5 837 aaKnown RBP5.72□□□□□ -1.49
SLIRP-202ENST00000553981 GGA1Q9UJY5 639 aa5.72□□□□□ -1.49
SLIRP-202ENST00000553981 KDM6BO15054 1643 aa5.71□□□□□ -1.5
SLIRP-202ENST00000553981 ATP4AP20648 1035 aa5.71□□□□□ -1.5
SLIRP-202ENST00000553981 SLCO4C1Q6ZQN7 724 aa5.71□□□□□ -1.5
SLIRP-202ENST00000553981 PLPP7Q8NBV4 271 aa5.71□□□□□ -1.5
SLIRP-202ENST00000553981 ZCCHC2Q9C0B9 1178 aaKnown RBP5.71□□□□□ -1.5
SLIRP-202ENST00000553981 GDPD2Q9HCC8 539 aa5.71□□□□□ -1.5
SLIRP-202ENST00000553981 KIAA0586Q9BVV6 1533 aa5.7□□□□□ -1.5
SLIRP-202ENST00000553981 AMPD1P23109 780 aa5.7□□□□□ -1.5
SLIRP-202ENST00000553981 ABL2P42684 1182 aa5.7□□□□□ -1.5
SLIRP-202ENST00000553981 SMTNP53814 917 aa5.7□□□□□ -1.5
SLIRP-202ENST00000553981 MAP7D1Q3KQU3 841 aa5.7□□□□□ -1.5
SLIRP-202ENST00000553981 FIGNL1Q6PIW4 674 aa5.7□□□□□ -1.5
SLIRP-202ENST00000553981 LINC00114Q6XXX2 140 aa5.7□□□□□ -1.5
SLIRP-202ENST00000553981 NIFKQ9BYG3 293 aaKnown RBP5.7□□□□□ -1.5
SLIRP-202ENST00000553981 SUV39H2Q9H5I1 410 aa5.7□□□□□ -1.5
SLIRP-202ENST00000553981 PCDHGC4Q9Y5F7 938 aa5.7□□□□□ -1.5
SLIRP-202ENST00000553981 ABCC2Q92887 1545 aa5.69□□□□□ -1.5
SLIRP-202ENST00000553981 TMEM229AB2RXF0 380 aa5.69□□□□□ -1.5
SLIRP-202ENST00000553981 ARAFP10398 606 aa5.69□□□□□ -1.5
SLIRP-202ENST00000553981 EPXP11678 715 aa5.69□□□□□ -1.5
SLIRP-202ENST00000553981 WASHC4Q2M389 1173 aa5.69□□□□□ -1.5
SLIRP-202ENST00000553981 ALYREFQ86V81 257 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 510.3 ms