RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 RGL2O15211 777 aa13.81□□□□□ -0.2
PABPN1-203ENST00000553960 HDAC1Q13547 482 aaPredicted RBP13.81□□□□□ -0.2
PABPN1-203ENST00000553960 COG6Q9Y2V7 657 aa13.81□□□□□ -0.2
PABPN1-203ENST00000553960 RREB1Q92766 1687 aa13.81□□□□□ -0.2
PABPN1-203ENST00000553960 NHSQ6T4R5 1651 aa13.8□□□□□ -0.2
PABPN1-203ENST00000553960 HMGB2P26583 209 aaKnown RBP13.8□□□□□ -0.2
PABPN1-203ENST00000553960 IRX6P78412 446 aaPredicted RBP13.8□□□□□ -0.2
PABPN1-203ENST00000553960 CENPQQ7L2Z9 268 aaPredicted RBP13.8□□□□□ -0.2
PABPN1-203ENST00000553960 TMEM57Q8N5G2 664 aa13.8□□□□□ -0.2
PABPN1-203ENST00000553960 SMARCC1Q92922 1105 aaPredicted RBP13.8□□□□□ -0.2
PABPN1-203ENST00000553960 CCDC136Q96JN2 1154 aa13.8□□□□□ -0.2
PABPN1-203ENST00000553960 USP35Q9P2H5 1018 aa13.8□□□□□ -0.2
PABPN1-203ENST00000553960 ZNF772Q68DY9 489 aaPredicted RBP13.79□□□□□ -0.2
PABPN1-203ENST00000553960 ATG3Q9NT62 314 aa13.79□□□□□ -0.2
PABPN1-203ENST00000553960 COL15A1P39059 1388 aa13.79□□□□□ -0.2
PABPN1-203ENST00000553960 SLC39A6Q13433 755 aa13.78□□□□□ -0.2
PABPN1-203ENST00000553960 SBF2Q86WG5 1849 aa13.78□□□□□ -0.2
PABPN1-203ENST00000553960 UTYO14607 1347 aa13.77□□□□□ -0.21
PABPN1-203ENST00000553960 ALDH1L1O75891 902 aa13.77□□□□□ -0.21
PABPN1-203ENST00000553960 DDX58O95786 925 aaKnown RBP13.77□□□□□ -0.21
PABPN1-203ENST00000553960 MEX3CQ5U5Q3 659 aaKnown RBP13.77□□□□□ -0.21
PABPN1-203ENST00000553960 KSR2Q6VAB6 950 aa13.77□□□□□ -0.21
PABPN1-203ENST00000553960 G2E3Q7L622 706 aa13.77□□□□□ -0.21
PABPN1-203ENST00000553960 CHPF2Q9P2E5 772 aa13.77□□□□□ -0.21
PABPN1-203ENST00000553960 HDAC5Q9UQL6 1122 aa13.77□□□□□ -0.21
PABPN1-203ENST00000553960 FAM98CQ17RN3 349 aaKnown RBP13.76□□□□□ -0.21
PABPN1-203ENST00000553960 PELP1Q8IZL8 1130 aaKnown RBP13.76□□□□□ -0.21
PABPN1-203ENST00000553960 TNNQ9UQP3 1299 aa13.76□□□□□ -0.21
PABPN1-203ENST00000553960 USP16Q9Y5T5 823 aa13.76□□□□□ -0.21
PABPN1-203ENST00000553960 TJP1Q07157 1748 aa13.76□□□□□ -0.21
PABPN1-203ENST00000553960 ADCY9O60503 1353 aa13.75□□□□□ -0.21
PABPN1-203ENST00000553960 STARD3NLO95772 234 aa13.75□□□□□ -0.21
PABPN1-203ENST00000553960 GNAI3P08754 354 aa13.75□□□□□ -0.21
PABPN1-203ENST00000553960 RPAP2Q8IXW5 612 aaPredicted RBP13.75□□□□□ -0.21
PABPN1-203ENST00000553960 DNAAF4Q8WXU2 420 aa13.75□□□□□ -0.21
PABPN1-203ENST00000553960 QTRT2Q9H974 415 aaKnown RBP13.75□□□□□ -0.21
PABPN1-203ENST00000553960 PRIM1P49642 420 aaKnown RBP13.74□□□□□ -0.21
PABPN1-203ENST00000553960 RBM6P78332 1123 aaKnown RBP13.74□□□□□ -0.21
PABPN1-203ENST00000553960 TRIM28Q13263 835 aaKnown RBP13.74□□□□□ -0.21
PABPN1-203ENST00000553960 FKBP5Q13451 457 aaPredicted RBP13.74□□□□□ -0.21
PABPN1-203ENST00000553960 BEND3Q5T5X7 828 aa13.74□□□□□ -0.21
PABPN1-203ENST00000553960 ITPRIPQ8IWB1 547 aa13.74□□□□□ -0.21
PABPN1-203ENST00000553960 SMC5Q8IY18 1101 aa13.74□□□□□ -0.21
PABPN1-203ENST00000553960 LINS1Q8NG48 757 aa13.74□□□□□ -0.21
PABPN1-203ENST00000553960 RWDD1Q9H446 243 aaPredicted RBP13.74□□□□□ -0.21
PABPN1-203ENST00000553960 ASAP1Q9ULH1 1129 aa13.74□□□□□ -0.21
PABPN1-203ENST00000553960 CCDC9Q9Y3X0 531 aaKnown RBP13.74□□□□□ -0.21
PABPN1-203ENST00000553960 PCDHB15Q9Y5E8 787 aa13.74□□□□□ -0.21
PABPN1-203ENST00000553960 COL5A3P25940 1745 aaPredicted RBP13.73□□□□□ -0.21
PABPN1-203ENST00000553960 B4GALNT3Q6L9W6 998 aa13.73□□□□□ -0.21
PABPN1-203ENST00000553960 PLBD2Q8NHP8 589 aa13.73□□□□□ -0.21
PABPN1-203ENST00000553960 PHAXQ9H814 394 aaKnown RBP13.73□□□□□ -0.21
PABPN1-203ENST00000553960 LY75O60449 1722 aa13.73□□□□□ -0.21
PABPN1-203ENST00000553960 NBPF26B4DH59 902 aa13.72□□□□□ -0.21
PABPN1-203ENST00000553960 CYP19A1P11511 503 aaPredicted RBP13.72□□□□□ -0.21
PABPN1-203ENST00000553960 EIF2S2P20042 333 aaKnown RBP13.72□□□□□ -0.21
PABPN1-203ENST00000553960 MTX1Q13505 466 aa13.72□□□□□ -0.21
PABPN1-203ENST00000553960 NBPF14Q5TI25 921 aa13.72□□□□□ -0.21
PABPN1-203ENST00000553960 NBPF10Q6P3W6 841 aaKnown RBP13.72□□□□□ -0.21
PABPN1-203ENST00000553960 NBPF15Q8N660 670 aa13.72□□□□□ -0.21
PABPN1-203ENST00000553960 NUP188Q5SRE5 1749 aa13.72□□□□□ -0.21
PABPN1-203ENST00000553960 PRAMEF22A3QJZ6 481 aa13.71□□□□□ -0.21
PABPN1-203ENST00000553960 PI4KAP2A4QPH2 592 aa13.71□□□□□ -0.21
PABPN1-203ENST00000553960 IL6STP40189 918 aaPredicted RBP13.71□□□□□ -0.21
PABPN1-203ENST00000553960 PROSER3Q2NL68 480 aa13.71□□□□□ -0.21
PABPN1-203ENST00000553960 RC3H1Q5TC82 1133 aaKnown RBP13.71□□□□□ -0.21
PABPN1-203ENST00000553960 ANKRD13DQ6ZTN6 518 aa13.71□□□□□ -0.21
PABPN1-203ENST00000553960 PI4KAP1Q8N8J0 262 aa13.71□□□□□ -0.21
PABPN1-203ENST00000553960 SLC4A9Q96Q91 983 aa13.71□□□□□ -0.21
PABPN1-203ENST00000553960 METTL22Q9BUU2 404 aaPredicted RBP13.71□□□□□ -0.21
PABPN1-203ENST00000553960 SRCIN1Q9C0H9 1055 aa13.71□□□□□ -0.21
PABPN1-203ENST00000553960 USP44Q9H0E7 712 aa13.71□□□□□ -0.21
PABPN1-203ENST00000553960 BTAF1O14981 1849 aa13.7□□□□□ -0.22
PABPN1-203ENST00000553960 ERVV-1B6SEH8 477 aa13.7□□□□□ -0.22
PABPN1-203ENST00000553960 FAM196AQ6ZSG2 479 aa13.7□□□□□ -0.22
PABPN1-203ENST00000553960 SEPT12Q8IYM1 358 aa13.7□□□□□ -0.22
PABPN1-203ENST00000553960 ANKRD44Q8N8A2 993 aa13.7□□□□□ -0.22
PABPN1-203ENST00000553960 BCL11BQ9C0K0 894 aaPredicted RBP13.7□□□□□ -0.22
PABPN1-203ENST00000553960 ARFGEF2Q9Y6D5 1785 aa13.7□□□□□ -0.22
PABPN1-203ENST00000553960 LOC102724428A0A0B4J2F2 783 aa13.69□□□□□ -0.22
PABPN1-203ENST00000553960 TCERG1O14776 1098 aaKnown RBP13.69□□□□□ -0.22
PABPN1-203ENST00000553960 SIK1P57059 783 aa13.69□□□□□ -0.22
PABPN1-203ENST00000553960 GCC1Q96CN9 775 aa13.69□□□□□ -0.22
PABPN1-203ENST00000553960 PALLDQ8WX93 1383 aa13.69□□□□□ -0.22
PABPN1-203ENST00000553960 CNTNAP4Q9C0A0 1308 aa13.68□□□□□ -0.22
PABPN1-203ENST00000553960 F6X3S4 739 aa13.68□□□□□ -0.22
PABPN1-203ENST00000553960 PTCD1O75127 700 aaKnown RBP13.68□□□□□ -0.22
PABPN1-203ENST00000553960 COPS6Q7L5N1 327 aa13.68□□□□□ -0.22
PABPN1-203ENST00000553960 BRWD3Q6RI45 1802 aa13.68□□□□□ -0.22
PABPN1-203ENST00000553960 RGPD3A6NKT7 1758 aaPredicted RBP13.68□□□□□ -0.22
PABPN1-203ENST00000553960 RGPD4Q7Z3J3 1758 aa13.68□□□□□ -0.22
PABPN1-203ENST00000553960 IGHDP01880 384 aa13.67□□□□□ -0.22
PABPN1-203ENST00000553960 GNAI2P04899 355 aa13.67□□□□□ -0.22
PABPN1-203ENST00000553960 EIF5P55010 431 aaKnown RBP13.67□□□□□ -0.22
PABPN1-203ENST00000553960 DNAJC10Q8IXB1 793 aa13.67□□□□□ -0.22
PABPN1-203ENST00000553960 XAGE3Q8WTP9 111 aa13.67□□□□□ -0.22
PABPN1-203ENST00000553960 DCTPP1Q9H773 170 aa13.67□□□□□ -0.22
PABPN1-203ENST00000553960 MAP3K2Q9Y2U5 619 aa13.67□□□□□ -0.22
PABPN1-203ENST00000553960 MYH14Q7Z406 1995 aaKnown RBP13.67□□□□□ -0.22
PABPN1-203ENST00000553960 HMMRO75330 724 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms