RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 TAF1LQ8IZX4 1826 aa8.64□□□□□ -1.03
FOXN3-205ENST00000553904 HEG1Q9ULI3 1381 aa8.63□□□□□ -1.03
FOXN3-205ENST00000553904 NPHP1O15259 732 aa8.63□□□□□ -1.03
FOXN3-205ENST00000553904 SERPINB2P05120 415 aa8.63□□□□□ -1.03
FOXN3-205ENST00000553904 EIF5P55010 431 aaKnown RBP8.63□□□□□ -1.03
FOXN3-205ENST00000553904 ZBTB1Q9Y2K1 713 aa8.63□□□□□ -1.03
FOXN3-205ENST00000553904 H0YIN7 160 aa8.62□□□□□ -1.03
FOXN3-205ENST00000553904 POLRMTO00411 1230 aaKnown RBP8.62□□□□□ -1.03
FOXN3-205ENST00000553904 NFIXQ14938 502 aa8.62□□□□□ -1.03
FOXN3-205ENST00000553904 SETDB2Q96T68 719 aa8.62□□□□□ -1.03
FOXN3-205ENST00000553904 WWC3Q9ULE0 1092 aa8.62□□□□□ -1.03
FOXN3-205ENST00000553904 ZNF330Q9Y3S2 320 aaPredicted RBP8.62□□□□□ -1.03
FOXN3-205ENST00000553904 COL15A1P39059 1388 aa8.61□□□□□ -1.03
FOXN3-205ENST00000553904 CEMIPQ8WUJ3 1361 aa8.61□□□□□ -1.03
FOXN3-205ENST00000553904 MAPK8IP3Q9UPT6 1336 aa8.61□□□□□ -1.03
FOXN3-205ENST00000553904 KCNA3P22001 575 aa8.61□□□□□ -1.03
FOXN3-205ENST00000553904 PDE6BP35913 854 aa8.61□□□□□ -1.03
FOXN3-205ENST00000553904 CLEC4GQ6UXB4 293 aa8.61□□□□□ -1.03
FOXN3-205ENST00000553904 ZNF652Q9Y2D9 606 aa8.61□□□□□ -1.03
FOXN3-205ENST00000553904 UBR3Q6ZT12 1888 aa8.61□□□□□ -1.03
FOXN3-205ENST00000553904 TUBGCP6Q96RT7 1819 aa8.61□□□□□ -1.03
FOXN3-205ENST00000553904 COL3A1P02461 1466 aaPredicted RBP8.6□□□□□ -1.03
FOXN3-205ENST00000553904 MRC1P22897 1456 aa8.6□□□□□ -1.03
FOXN3-205ENST00000553904 RGL2O15211 777 aa8.6□□□□□ -1.03
FOXN3-205ENST00000553904 A1BGP04217 495 aa8.6□□□□□ -1.03
FOXN3-205ENST00000553904 DDR1Q08345 913 aa8.6□□□□□ -1.03
FOXN3-205ENST00000553904 BICDL1Q6ZP65 573 aa8.6□□□□□ -1.03
FOXN3-205ENST00000553904 MCM10Q7L590 875 aa8.6□□□□□ -1.03
FOXN3-205ENST00000553904 DZIP3Q86Y13 1208 aaKnown RBP8.6□□□□□ -1.03
FOXN3-205ENST00000553904 TTLL6Q8N841 843 aa8.6□□□□□ -1.03
FOXN3-205ENST00000553904 TBC1D2BQ9UPU7 963 aa8.6□□□□□ -1.03
FOXN3-205ENST00000553904 USP16Q9Y5T5 823 aa8.6□□□□□ -1.03
FOXN3-205ENST00000553904 C10orf71Q711Q0 1435 aa8.6□□□□□ -1.03
FOXN3-205ENST00000553904 SENP3-EIF4A1A0A087X0R7 540 aa8.59□□□□□ -1.03
FOXN3-205ENST00000553904 ST5P78524 1137 aa8.59□□□□□ -1.03
FOXN3-205ENST00000553904 LMOD3Q0VAK6 560 aa8.59□□□□□ -1.03
FOXN3-205ENST00000553904 DDX10Q13206 875 aaKnown RBP8.59□□□□□ -1.03
FOXN3-205ENST00000553904 NFE2L2Q16236 605 aa8.59□□□□□ -1.03
FOXN3-205ENST00000553904 TPTE2Q6XPS3 522 aa8.59□□□□□ -1.03
FOXN3-205ENST00000553904 BRIP1Q9BX63 1249 aa8.59□□□□□ -1.03
FOXN3-205ENST00000553904 SCN11AQ9UI33 1791 aa8.58□□□□□ -1.04
FOXN3-205ENST00000553904 PXDNLA1KZ92 1463 aa8.58□□□□□ -1.04
FOXN3-205ENST00000553904 ATP10DQ9P241 1426 aa8.58□□□□□ -1.04
FOXN3-205ENST00000553904 KCNQ3O43525 872 aa8.58□□□□□ -1.04
FOXN3-205ENST00000553904 CHRNA5P30532 468 aa8.58□□□□□ -1.04
FOXN3-205ENST00000553904 DCTN1Q14203 1278 aa8.58□□□□□ -1.04
FOXN3-205ENST00000553904 TBC1D9BQ66K14 1250 aa8.58□□□□□ -1.04
FOXN3-205ENST00000553904 C2CD5Q86YS7 1000 aa8.58□□□□□ -1.04
FOXN3-205ENST00000553904 C16orf71Q8IYS4 520 aaPredicted RBP8.58□□□□□ -1.04
FOXN3-205ENST00000553904 ZNF526Q8TF50 670 aaPredicted RBP8.58□□□□□ -1.04
FOXN3-205ENST00000553904 PLEKHF1Q96S99 279 aa8.58□□□□□ -1.04
FOXN3-205ENST00000553904 BCL2L12Q9HB09 334 aa8.58□□□□□ -1.04
FOXN3-205ENST00000553904 BABAM1Q9NWV8 329 aa8.58□□□□□ -1.04
FOXN3-205ENST00000553904 CHD4Q14839 1912 aa8.58□□□□□ -1.04
FOXN3-205ENST00000553904 CICQ96RK0 1608 aaPredicted RBP8.58□□□□□ -1.04
FOXN3-205ENST00000553904 KDM2BQ8NHM5 1336 aa8.57□□□□□ -1.04
FOXN3-205ENST00000553904 GTF2E1P29083 439 aaPredicted RBP8.57□□□□□ -1.04
FOXN3-205ENST00000553904 ZEB1P37275 1124 aaPredicted RBP8.57□□□□□ -1.04
FOXN3-205ENST00000553904 RIPK4P57078 832 aa8.57□□□□□ -1.04
FOXN3-205ENST00000553904 WDR43Q15061 677 aaKnown RBP eCLIP8.57□□□□□ -1.04
FOXN3-205ENST00000553904 C9orf131Q5VYM1 1079 aa8.57□□□□□ -1.04
FOXN3-205ENST00000553904 DPY19L2Q6NUT2 758 aa8.57□□□□□ -1.04
FOXN3-205ENST00000553904 CNBD1Q8NA66 436 aa8.57□□□□□ -1.04
FOXN3-205ENST00000553904 CNKSR1Q969H4 720 aa8.57□□□□□ -1.04
FOXN3-205ENST00000553904 ZNF622Q969S3 477 aaKnown RBP eCLIP8.57□□□□□ -1.04
FOXN3-205ENST00000553904 KCPQ6ZWJ8 1503 aa8.57□□□□□ -1.04
FOXN3-205ENST00000553904 CARMIL3Q8ND23 1372 aa8.57□□□□□ -1.04
FOXN3-205ENST00000553904 TOMM70O94826 608 aa8.56□□□□□ -1.04
FOXN3-205ENST00000553904 CAMTA2O94983 1202 aa8.56□□□□□ -1.04
FOXN3-205ENST00000553904 LMNB1P20700 586 aa8.56□□□□□ -1.04
FOXN3-205ENST00000553904 SOGA3Q5TF21 947 aa8.56□□□□□ -1.04
FOXN3-205ENST00000553904 NBPF5PQ86XG9 351 aaPredicted RBP8.56□□□□□ -1.04
FOXN3-205ENST00000553904 MIS18AQ9NYP9 233 aa8.56□□□□□ -1.04
FOXN3-205ENST00000553904 RNF181Q9P0P0 153 aa8.56□□□□□ -1.04
FOXN3-205ENST00000553904 COL5A3P25940 1745 aaPredicted RBP8.56□□□□□ -1.04
FOXN3-205ENST00000553904 MYBBP1AQ9BQG0 1328 aaKnown RBP8.55□□□□□ -1.04
FOXN3-205ENST00000553904 C4AP0C0L4 1744 aa8.55□□□□□ -1.04
FOXN3-205ENST00000553904 ERVV-1B6SEH8 477 aa8.55□□□□□ -1.04
FOXN3-205ENST00000553904 ALDH1B1P30837 517 aa8.55□□□□□ -1.04
FOXN3-205ENST00000553904 EIF4A1P60842 406 aaKnown RBP8.55□□□□□ -1.04
FOXN3-205ENST00000553904 STYK1Q6J9G0 422 aa8.55□□□□□ -1.04
FOXN3-205ENST00000553904 PRR5LQ6MZQ0 368 aa8.55□□□□□ -1.04
FOXN3-205ENST00000553904 KIF6Q6ZMV9 814 aa8.55□□□□□ -1.04
FOXN3-205ENST00000553904 NYXQ9GZU5 481 aa8.55□□□□□ -1.04
FOXN3-205ENST00000553904 ADAMTS7Q9UKP4 1686 aa8.55□□□□□ -1.04
FOXN3-205ENST00000553904 ZC3H4Q9UPT8 1303 aaKnown RBP8.54□□□□□ -1.04
FOXN3-205ENST00000553904 ADCY9O60503 1353 aa8.54□□□□□ -1.04
FOXN3-205ENST00000553904 TMPOP42166 694 aaKnown RBP8.54□□□□□ -1.04
FOXN3-205ENST00000553904 RUNDC1Q96C34 613 aa8.54□□□□□ -1.04
FOXN3-205ENST00000553904 MASTLQ96GX5 879 aa8.54□□□□□ -1.04
FOXN3-205ENST00000553904 TSPYL4Q9UJ04 414 aa8.54□□□□□ -1.04
FOXN3-205ENST00000553904 NIP7Q9Y221 180 aaKnown RBP eCLIP8.54□□□□□ -1.04
FOXN3-205ENST00000553904 RRP7AQ9Y3A4 280 aaKnown RBP8.54□□□□□ -1.04
FOXN3-205ENST00000553904 ERBB4Q15303 1308 aa8.54□□□□□ -1.04
FOXN3-205ENST00000553904 MYH14Q7Z406 1995 aaKnown RBP8.53□□□□□ -1.04
FOXN3-205ENST00000553904 PRAMEF22A3QJZ6 481 aa8.53□□□□□ -1.04
FOXN3-205ENST00000553904 SRGNP10124 158 aa8.53□□□□□ -1.04
FOXN3-205ENST00000553904 NPR1P16066 1061 aa8.53□□□□□ -1.04
FOXN3-205ENST00000553904 HSPA6P17066 643 aa8.53□□□□□ -1.04
FOXN3-205ENST00000553904 PIP4K2AP48426 406 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms