RNA–Protein interactions for RNA: ENST00000553343.5

SDR39U1-204, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 681 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-204ENST00000553343 DNAJC10Q8IXB1 793 aa26.48■■□□□ 1.83
SDR39U1-204ENST00000553343 QSER1Q2KHR3 1735 aa26.48■■□□□ 1.83
SDR39U1-204ENST00000553343 EXOSC9Q06265 439 aaKnown RBP26.46■■□□□ 1.83
SDR39U1-204ENST00000553343 YTHDC1Q96MU7 727 aaKnown RBP26.46■■□□□ 1.83
SDR39U1-204ENST00000553343 C8orf58Q8NAV2 365 aa26.45■■□□□ 1.82
SDR39U1-204ENST00000553343 LINC00116Q8NCU8 138 aa26.45■■□□□ 1.82
SDR39U1-204ENST00000553343 CACNA1FO60840 1977 aa26.44■■□□□ 1.82
SDR39U1-204ENST00000553343 CCDC87Q9NVE4 849 aa26.44■■□□□ 1.82
SDR39U1-204ENST00000553343 USP16Q9Y5T5 823 aa26.44■■□□□ 1.82
SDR39U1-204ENST00000553343 CRKLP46109 303 aaKnown RBP26.43■■□□□ 1.82
SDR39U1-204ENST00000553343 HDGFL1Q5TGJ6 251 aa26.43■■□□□ 1.82
SDR39U1-204ENST00000553343 NBPF14Q5TI25 921 aa26.43■■□□□ 1.82
SDR39U1-204ENST00000553343 CCDC30Q5VVM6 783 aa26.43■■□□□ 1.82
SDR39U1-204ENST00000553343 VAMP4O75379 141 aa26.42■■□□□ 1.82
SDR39U1-204ENST00000553343 KRT24Q2M2I5 525 aa26.42■■□□□ 1.82
SDR39U1-204ENST00000553343 UBR3Q6ZT12 1888 aa26.41■■□□□ 1.82
SDR39U1-204ENST00000553343 MYH14Q7Z406 1995 aaKnown RBP26.41■■□□□ 1.82
SDR39U1-204ENST00000553343 ADRA2BP18089 450 aa26.41■■□□□ 1.82
SDR39U1-204ENST00000553343 TSPYL6Q8N831 410 aa26.41■■□□□ 1.82
SDR39U1-204ENST00000553343 AKT1S1Q96B36 256 aa26.41■■□□□ 1.82
SDR39U1-204ENST00000553343 AK7Q96M32 723 aa26.41■■□□□ 1.82
SDR39U1-204ENST00000553343 PRAMEF22A3QJZ6 481 aa26.4■■□□□ 1.82
SDR39U1-204ENST00000553343 IL6STP40189 918 aaPredicted RBP26.4■■□□□ 1.82
SDR39U1-204ENST00000553343 FLAD1Q8NFF5 587 aa26.4■■□□□ 1.82
SDR39U1-204ENST00000553343 STK32BQ9NY57 414 aa26.4■■□□□ 1.82
SDR39U1-204ENST00000553343 DBF4Q9UBU7 674 aaPredicted RBP26.4■■□□□ 1.82
SDR39U1-204ENST00000553343 RPS6KA4O75676 772 aa26.39■■□□□ 1.82
SDR39U1-204ENST00000553343 SSFA2P28290 1259 aa26.39■■□□□ 1.82
SDR39U1-204ENST00000553343 INTS5Q6P9B9 1019 aaKnown RBP26.39■■□□□ 1.82
SDR39U1-204ENST00000553343 KCNQ4P56696 695 aa26.38■■□□□ 1.81
SDR39U1-204ENST00000553343 SLC15A2Q16348 729 aa26.38■■□□□ 1.81
SDR39U1-204ENST00000553343 DDX21Q9NR30 783 aaKnown RBP eCLIP26.38■■□□□ 1.81
SDR39U1-204ENST00000553343 ALDH1L2Q3SY69 923 aa26.37■■□□□ 1.81
SDR39U1-204ENST00000553343 STK31Q9BXU1 1019 aa26.37■■□□□ 1.81
SDR39U1-204ENST00000553343 RTCBQ9Y3I0 505 aaKnown RBP26.37■■□□□ 1.81
SDR39U1-204ENST00000553343 ELL2O00472 640 aaPredicted RBP26.36■■□□□ 1.81
SDR39U1-204ENST00000553343 EIF2S2P20042 333 aaKnown RBP26.36■■□□□ 1.81
SDR39U1-204ENST00000553343 HYPKQ9NX55 129 aa26.36■■□□□ 1.81
SDR39U1-204ENST00000553343 ZBTB1Q9Y2K1 713 aa26.36■■□□□ 1.81
SDR39U1-204ENST00000553343 A0A087WZG4 1122 aa26.35■■□□□ 1.81
SDR39U1-204ENST00000553343 RGL2O15211 777 aa26.35■■□□□ 1.81
SDR39U1-204ENST00000553343 GNPATO15228 680 aa26.35■■□□□ 1.81
SDR39U1-204ENST00000553343 NPM2Q86SE8 214 aaKnown RBP26.35■■□□□ 1.81
SDR39U1-204ENST00000553343 TUBGCP6Q96RT7 1819 aa26.35■■□□□ 1.81
SDR39U1-204ENST00000553343 A1BGP04217 495 aa26.34■■□□□ 1.81
SDR39U1-204ENST00000553343 EIF5P55010 431 aaKnown RBP26.34■■□□□ 1.81
SDR39U1-204ENST00000553343 COL15A1P39059 1388 aa26.33■■□□□ 1.81
SDR39U1-204ENST00000553343 PDIA6Q15084 440 aa26.33■■□□□ 1.81
SDR39U1-204ENST00000553343 ZNF827Q17R98 1081 aa26.33■■□□□ 1.81
SDR39U1-204ENST00000553343 TFCP2L1Q9NZI6 479 aa26.33■■□□□ 1.81
SDR39U1-204ENST00000553343 NBPF26B4DH59 902 aa26.32■■□□□ 1.8
SDR39U1-204ENST00000553343 BRPF1P55201 1214 aaPredicted RBP26.32■■□□□ 1.8
SDR39U1-204ENST00000553343 NBPF10Q6P3W6 841 aaKnown RBP26.32■■□□□ 1.8
SDR39U1-204ENST00000553343 NBPF15Q8N660 670 aa26.32■■□□□ 1.8
SDR39U1-204ENST00000553343 ANO8Q9HCE9 1232 aaPredicted RBP26.32■■□□□ 1.8
SDR39U1-204ENST00000553343 CHPF2Q9P2E5 772 aa26.32■■□□□ 1.8
SDR39U1-204ENST00000553343 CANXP27824 592 aaKnown RBP26.3■■□□□ 1.8
SDR39U1-204ENST00000553343 TRAPPC3LQ5T215 181 aa26.3■■□□□ 1.8
SDR39U1-204ENST00000553343 LRP10Q7Z4F1 713 aa26.3■■□□□ 1.8
SDR39U1-204ENST00000553343 C4AP0C0L4 1744 aa26.3■■□□□ 1.8
SDR39U1-204ENST00000553343 SCN7AQ01118 1682 aa26.28■■□□□ 1.8
SDR39U1-204ENST00000553343 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.27■■□□□ 1.8
SDR39U1-204ENST00000553343 BCORQ6W2J9 1755 aa26.27■■□□□ 1.8
SDR39U1-204ENST00000553343 PNPLA7Q6ZV29 1317 aa26.26■■□□□ 1.79
SDR39U1-204ENST00000553343 SLC4A2P04920 1241 aa26.26■■□□□ 1.79
SDR39U1-204ENST00000553343 RARSP54136 660 aaKnown RBP26.26■■□□□ 1.79
SDR39U1-204ENST00000553343 NECTIN2Q92692 538 aa26.26■■□□□ 1.79
SDR39U1-204ENST00000553343 KIF16BQ96L93 1317 aa26.25■■□□□ 1.79
SDR39U1-204ENST00000553343 MYL6BP14649 208 aa26.25■■□□□ 1.79
SDR39U1-204ENST00000553343 SLC16A10Q8TF71 515 aa26.25■■□□□ 1.79
SDR39U1-204ENST00000553343 ERVV-1B6SEH8 477 aa26.24■■□□□ 1.79
SDR39U1-204ENST00000553343 DDX58O95786 925 aaKnown RBP26.24■■□□□ 1.79
SDR39U1-204ENST00000553343 SSH1Q8WYL5 1049 aa26.24■■□□□ 1.79
SDR39U1-204ENST00000553343 NARFQ9UHQ1 456 aa26.24■■□□□ 1.79
SDR39U1-204ENST00000553343 CASZ1Q86V15 1759 aa26.23■■□□□ 1.79
SDR39U1-204ENST00000553343 PTPRCP08575 1304 aa26.23■■□□□ 1.79
SDR39U1-204ENST00000553343 RFC4P35249 363 aa26.23■■□□□ 1.79
SDR39U1-204ENST00000553343 PROSER3Q2NL68 480 aa26.23■■□□□ 1.79
SDR39U1-204ENST00000553343 KIF6Q6ZMV9 814 aa26.23■■□□□ 1.79
SDR39U1-204ENST00000553343 DZIP3Q86Y13 1208 aaKnown RBP26.23■■□□□ 1.79
SDR39U1-204ENST00000553343 ARHGEF1Q92888 912 aaKnown RBP26.23■■□□□ 1.79
SDR39U1-204ENST00000553343 SMC4Q9NTJ3 1288 aa26.23■■□□□ 1.79
SDR39U1-204ENST00000553343 USP42Q9H9J4 1324 aaKnown RBP26.22■■□□□ 1.79
SDR39U1-204ENST00000553343 CLEC4GQ6UXB4 293 aa26.22■■□□□ 1.79
SDR39U1-204ENST00000553343 MRPL50Q8N5N7 158 aaKnown RBP26.22■■□□□ 1.79
SDR39U1-204ENST00000553343 MAP3K15Q6ZN16 1313 aa26.21■■□□□ 1.79
SDR39U1-204ENST00000553343 ZPR1O75312 459 aa26.21■■□□□ 1.79
SDR39U1-204ENST00000553343 FLIIQ13045 1269 aa26.21■■□□□ 1.79
SDR39U1-204ENST00000553343 ZNF652Q9Y2D9 606 aa26.21■■□□□ 1.79
SDR39U1-204ENST00000553343 PHF14O94880 888 aa26.2■■□□□ 1.78
SDR39U1-204ENST00000553343 PIP4K2AP48426 406 aaPredicted RBP26.2■■□□□ 1.78
SDR39U1-204ENST00000553343 COPS6Q7L5N1 327 aa26.2■■□□□ 1.78
SDR39U1-204ENST00000553343 COL23A1Q86Y22 540 aaPredicted RBP26.2■■□□□ 1.78
SDR39U1-204ENST00000553343 XAGE3Q8WTP9 111 aa26.2■■□□□ 1.78
SDR39U1-204ENST00000553343 ZNF330Q9Y3S2 320 aaPredicted RBP26.2■■□□□ 1.78
SDR39U1-204ENST00000553343 AMIGO3Q86WK7 504 aa26.19■■□□□ 1.78
SDR39U1-204ENST00000553343 PLBD2Q8NHP8 589 aa26.19■■□□□ 1.78
SDR39U1-204ENST00000553343 ARHGAP45Q92619 1136 aa26.19■■□□□ 1.78
SDR39U1-204ENST00000553343 RCAN3Q9UKA8 241 aa26.19■■□□□ 1.78
SDR39U1-204ENST00000553343 ANXA1P04083 346 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms