RNA–Protein interactions for RNA: ENST00000553078.5

CNOT2-243, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-243ENST00000553078 SLAIN2Q9P270 581 aa12.55□□□□□ -0.4
CNOT2-243ENST00000553078 EXOC6BQ9Y2D4 811 aa12.55□□□□□ -0.4
CNOT2-243ENST00000553078 SIPA1L3O60292 1781 aaPredicted RBP12.55□□□□□ -0.4
CNOT2-243ENST00000553078 COL18A1P39060 1754 aa12.55□□□□□ -0.4
CNOT2-243ENST00000553078 SOS2Q07890 1332 aaPredicted RBP12.55□□□□□ -0.4
CNOT2-243ENST00000553078 SCN11AQ9UI33 1791 aa12.54□□□□□ -0.4
CNOT2-243ENST00000553078 MX1P20591 662 aa12.54□□□□□ -0.4
CNOT2-243ENST00000553078 RIC3Q7Z5B4 369 aa12.54□□□□□ -0.4
CNOT2-243ENST00000553078 CABLES1Q8TDN4 633 aa12.54□□□□□ -0.4
CNOT2-243ENST00000553078 SNX21Q969T3 373 aa12.54□□□□□ -0.4
CNOT2-243ENST00000553078 KIF1BPQ96EK5 621 aa12.54□□□□□ -0.4
CNOT2-243ENST00000553078 TBC1D2Q9BYX2 928 aa12.54□□□□□ -0.4
CNOT2-243ENST00000553078 OSBPL3Q9H4L5 887 aa12.54□□□□□ -0.4
CNOT2-243ENST00000553078 ZNF335Q9H4Z2 1342 aaPredicted RBP12.54□□□□□ -0.4
CNOT2-243ENST00000553078 STRCQ7RTU9 1775 aa12.53□□□□□ -0.4
CNOT2-243ENST00000553078 XIRP1Q702N8 1843 aaKnown RBP12.53□□□□□ -0.4
CNOT2-243ENST00000553078 SMARCA5O60264 1052 aaPredicted RBP12.53□□□□□ -0.4
CNOT2-243ENST00000553078 SNRPA1P09661 255 aaKnown RBP12.53□□□□□ -0.4
CNOT2-243ENST00000553078 GSPT1P15170 499 aaKnown RBP12.53□□□□□ -0.4
CNOT2-243ENST00000553078 EVA1CP58658 441 aa12.53□□□□□ -0.4
CNOT2-243ENST00000553078 RABEP1Q15276 862 aa12.53□□□□□ -0.4
CNOT2-243ENST00000553078 BEND3Q5T5X7 828 aa12.53□□□□□ -0.4
CNOT2-243ENST00000553078 LARP1Q6PKG0 1096 aaKnown RBP12.53□□□□□ -0.4
CNOT2-243ENST00000553078 SLKQ9H2G2 1235 aaPredicted RBP12.53□□□□□ -0.4
CNOT2-243ENST00000553078 MAP3K2Q9Y2U5 619 aa12.53□□□□□ -0.4
CNOT2-243ENST00000553078 ERBB4Q15303 1308 aa12.53□□□□□ -0.4
CNOT2-243ENST00000553078 HEG1Q9ULI3 1381 aa12.53□□□□□ -0.4
CNOT2-243ENST00000553078 KDM6AO15550 1401 aaPredicted RBP12.53□□□□□ -0.4
CNOT2-243ENST00000553078 ERC2O15083 957 aa12.52□□□□□ -0.41
CNOT2-243ENST00000553078 SRGAP3O43295 1099 aa12.52□□□□□ -0.41
CNOT2-243ENST00000553078 KCNQ3O43525 872 aa12.52□□□□□ -0.41
CNOT2-243ENST00000553078 SURF6O75683 361 aaKnown RBP12.52□□□□□ -0.41
CNOT2-243ENST00000553078 PDE1AP54750 535 aa12.52□□□□□ -0.41
CNOT2-243ENST00000553078 NFKBIBQ15653 356 aa12.52□□□□□ -0.41
CNOT2-243ENST00000553078 LINS1Q8NG48 757 aa12.52□□□□□ -0.41
CNOT2-243ENST00000553078 SSH3Q8TE77 659 aa12.52□□□□□ -0.41
CNOT2-243ENST00000553078 USP44Q9H0E7 712 aa12.52□□□□□ -0.41
CNOT2-243ENST00000553078 CHMP5Q9NZZ3 219 aa12.52□□□□□ -0.41
CNOT2-243ENST00000553078 ADCY9O60503 1353 aa12.52□□□□□ -0.41
CNOT2-243ENST00000553078 TRIM6-TRIM34B2RNG4 842 aa12.51□□□□□ -0.41
CNOT2-243ENST00000553078 ST18O60284 1047 aa12.51□□□□□ -0.41
CNOT2-243ENST00000553078 IL2RBP14784 551 aa12.51□□□□□ -0.41
CNOT2-243ENST00000553078 SDSP20132 328 aa12.51□□□□□ -0.41
CNOT2-243ENST00000553078 PPP1R42Q7Z4L9 355 aa12.51□□□□□ -0.41
CNOT2-243ENST00000553078 IL27Q8NEV9 243 aa12.51□□□□□ -0.41
CNOT2-243ENST00000553078 ZCRB1Q8TBF4 217 aaKnown RBP12.51□□□□□ -0.41
CNOT2-243ENST00000553078 COL5A2P05997 1499 aaPredicted RBP12.51□□□□□ -0.41
CNOT2-243ENST00000553078 NHSL1Q5SYE7 1610 aa12.51□□□□□ -0.41
CNOT2-243ENST00000553078 PNMA6EA0A0J9YXQ4 647 aa12.5□□□□□ -0.41
CNOT2-243ENST00000553078 PTMSP20962 102 aa12.5□□□□□ -0.41
CNOT2-243ENST00000553078 POLA2Q14181 598 aa12.5□□□□□ -0.41
CNOT2-243ENST00000553078 CLASRPQ8N2M8 674 aaKnown RBP12.5□□□□□ -0.41
CNOT2-243ENST00000553078 CARD10Q9BWT7 1032 aa12.5□□□□□ -0.41
CNOT2-243ENST00000553078 ABCA3Q99758 1704 aa12.5□□□□□ -0.41
CNOT2-243ENST00000553078 LAMB4A4D0S4 1761 aa12.5□□□□□ -0.41
CNOT2-243ENST00000553078 GRM8O00222 908 aa12.49□□□□□ -0.41
CNOT2-243ENST00000553078 AIMP1Q12904 312 aaKnown RBP12.49□□□□□ -0.41
CNOT2-243ENST00000553078 CNTROBQ8N137 903 aa12.49□□□□□ -0.41
CNOT2-243ENST00000553078 NFATC2IPQ8NCF5 419 aa12.49□□□□□ -0.41
CNOT2-243ENST00000553078 RILPL2Q969X0 211 aa12.49□□□□□ -0.41
CNOT2-243ENST00000553078 CIZ1Q9ULV3 898 aaPredicted RBP12.49□□□□□ -0.41
CNOT2-243ENST00000553078 KDM4FA0A1W2PPD8 638 aa12.48□□□□□ -0.41
CNOT2-243ENST00000553078 ERVV-2B6SEH9 535 aa12.48□□□□□ -0.41
CNOT2-243ENST00000553078 K7ELQ4 463 aaPredicted RBP12.48□□□□□ -0.41
CNOT2-243ENST00000553078 ANXA1P04083 346 aa12.48□□□□□ -0.41
CNOT2-243ENST00000553078 MYL6BP14649 208 aa12.48□□□□□ -0.41
CNOT2-243ENST00000553078 DEKP35659 375 aaKnown RBP12.48□□□□□ -0.41
CNOT2-243ENST00000553078 SLC39A6Q13433 755 aa12.48□□□□□ -0.41
CNOT2-243ENST00000553078 MTX1Q13505 466 aa12.48□□□□□ -0.41
CNOT2-243ENST00000553078 C16orf71Q8IYS4 520 aaPredicted RBP12.48□□□□□ -0.41
CNOT2-243ENST00000553078 RHPN1Q8TCX5 695 aa12.48□□□□□ -0.41
CNOT2-243ENST00000553078 STAP2Q9UGK3 403 aa12.48□□□□□ -0.41
CNOT2-243ENST00000553078 TTC41PQ6P2S7 1318 aa12.47□□□□□ -0.41
CNOT2-243ENST00000553078 EPB41L2O43491 1005 aaKnown RBP12.47□□□□□ -0.41
CNOT2-243ENST00000553078 IFIT2P09913 472 aaKnown RBP12.47□□□□□ -0.41
CNOT2-243ENST00000553078 G3BP1Q13283 466 aaKnown RBP eCLIP12.47□□□□□ -0.41
CNOT2-243ENST00000553078 STRN4Q9NRL3 753 aa12.47□□□□□ -0.41
CNOT2-243ENST00000553078 C5P01031 1676 aa12.46□□□□□ -0.41
CNOT2-243ENST00000553078 CYP27B1O15528 508 aa12.46□□□□□ -0.41
CNOT2-243ENST00000553078 GLRX3O76003 335 aaKnown RBP12.46□□□□□ -0.41
CNOT2-243ENST00000553078 MCM2P49736 904 aa12.46□□□□□ -0.41
CNOT2-243ENST00000553078 OTUD7AQ8TE49 926 aaPredicted RBP12.46□□□□□ -0.41
CNOT2-243ENST00000553078 XAGE3Q8WTP9 111 aa12.46□□□□□ -0.41
CNOT2-243ENST00000553078 RUFY2Q8WXA3 655 aa12.46□□□□□ -0.41
CNOT2-243ENST00000553078 GBP4Q96PP9 640 aa12.46□□□□□ -0.41
CNOT2-243ENST00000553078 DDX11L8A8MPP1 907 aa12.45□□□□□ -0.42
CNOT2-243ENST00000553078 NBPF7P0C2Y1 421 aaPredicted RBP12.45□□□□□ -0.42
CNOT2-243ENST00000553078 ZNF496Q96IT1 587 aaPredicted RBP12.45□□□□□ -0.42
CNOT2-243ENST00000553078 MYD88Q99836 296 aa12.45□□□□□ -0.42
CNOT2-243ENST00000553078 METTL22Q9BUU2 404 aaPredicted RBP12.45□□□□□ -0.42
CNOT2-243ENST00000553078 IL1RAPL2Q9NP60 686 aa12.45□□□□□ -0.42
CNOT2-243ENST00000553078 UTYO14607 1347 aa12.44□□□□□ -0.42
CNOT2-243ENST00000553078 SALL3Q9BXA9 1300 aa12.44□□□□□ -0.42
CNOT2-243ENST00000553078 GOLGA6L22H0YM25 854 aa12.44□□□□□ -0.42
CNOT2-243ENST00000553078 HIP1O00291 1037 aa12.44□□□□□ -0.42
CNOT2-243ENST00000553078 PROSER3Q2NL68 480 aa12.44□□□□□ -0.42
CNOT2-243ENST00000553078 ANKRD13DQ6ZTN6 518 aa12.44□□□□□ -0.42
CNOT2-243ENST00000553078 KIAA1211Q6ZU35 1233 aa12.44□□□□□ -0.42
CNOT2-243ENST00000553078 COPS6Q7L5N1 327 aa12.44□□□□□ -0.42
CNOT2-243ENST00000553078 ESYT1Q9BSJ8 1104 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms