RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 RC3H1Q5TC82 1133 aaKnown RBP22.75■■□□□ 1.23
CDK4-208ENST00000551706 RRP7AQ9Y3A4 280 aaKnown RBP22.75■■□□□ 1.23
CDK4-208ENST00000551706 KCPQ6ZWJ8 1503 aa22.75■■□□□ 1.23
CDK4-208ENST00000551706 NEUROD2Q15784 382 aa22.74■■□□□ 1.23
CDK4-208ENST00000551706 KLRG1Q96E93 195 aa22.74■■□□□ 1.23
CDK4-208ENST00000551706 FMNL2Q96PY5 1086 aa22.74■■□□□ 1.23
CDK4-208ENST00000551706 CNTNAP4Q9C0A0 1308 aa22.74■■□□□ 1.23
CDK4-208ENST00000551706 DLG5Q8TDM6 1919 aa22.73■■□□□ 1.23
CDK4-208ENST00000551706 APAF1O14727 1248 aa22.73■■□□□ 1.23
CDK4-208ENST00000551706 PHF14O94880 888 aa22.73■■□□□ 1.23
CDK4-208ENST00000551706 AMIGO3Q86WK7 504 aa22.73■■□□□ 1.23
CDK4-208ENST00000551706 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.72■■□□□ 1.23
CDK4-208ENST00000551706 SSFA2P28290 1259 aa22.72■■□□□ 1.23
CDK4-208ENST00000551706 JMYQ8N9B5 988 aa22.72■■□□□ 1.23
CDK4-208ENST00000551706 ZNF496Q96IT1 587 aaPredicted RBP22.72■■□□□ 1.23
CDK4-208ENST00000551706 THUMPD2Q9BTF0 503 aaKnown RBP22.72■■□□□ 1.23
CDK4-208ENST00000551706 TEX13AQ9BXU3 409 aaPredicted RBP22.72■■□□□ 1.23
CDK4-208ENST00000551706 HEG1Q9ULI3 1381 aa22.72■■□□□ 1.23
CDK4-208ENST00000551706 GNPATO15228 680 aa22.71■■□□□ 1.23
CDK4-208ENST00000551706 DNAJC10Q8IXB1 793 aa22.71■■□□□ 1.23
CDK4-208ENST00000551706 TNS4Q8IZW8 715 aa22.71■■□□□ 1.23
CDK4-208ENST00000551706 NMRK2Q9NPI5 230 aa22.71■■□□□ 1.23
CDK4-208ENST00000551706 UBR2Q8IWV8 1755 aa22.71■■□□□ 1.23
CDK4-208ENST00000551706 UBR3Q6ZT12 1888 aa22.71■■□□□ 1.23
CDK4-208ENST00000551706 PRELPP51888 382 aa22.7■■□□□ 1.22
CDK4-208ENST00000551706 DIEXFQ68CQ4 756 aaKnown RBP22.7■■□□□ 1.22
CDK4-208ENST00000551706 RBM46Q8TBY0 533 aaKnown RBP22.7■■□□□ 1.22
CDK4-208ENST00000551706 BABAM1Q9NWV8 329 aa22.7■■□□□ 1.22
CDK4-208ENST00000551706 TRIM35Q9UPQ4 493 aa22.7■■□□□ 1.22
CDK4-208ENST00000551706 RTCBQ9Y3I0 505 aaKnown RBP22.7■■□□□ 1.22
CDK4-208ENST00000551706 STARD3NLO95772 234 aa22.69■■□□□ 1.22
CDK4-208ENST00000551706 CRKLP46109 303 aaKnown RBP22.69■■□□□ 1.22
CDK4-208ENST00000551706 SMIM5Q71RC9 77 aa22.69■■□□□ 1.22
CDK4-208ENST00000551706 COL5A3P25940 1745 aaPredicted RBP22.68■■□□□ 1.22
CDK4-208ENST00000551706 KCNQ3O43525 872 aa22.68■■□□□ 1.22
CDK4-208ENST00000551706 ADRA2BP18089 450 aa22.68■■□□□ 1.22
CDK4-208ENST00000551706 HTRA3P83110 453 aa22.68■■□□□ 1.22
CDK4-208ENST00000551706 TJP1Q07157 1748 aa22.68■■□□□ 1.22
CDK4-208ENST00000551706 CCER2I3L3R5 266 aa22.67■■□□□ 1.22
CDK4-208ENST00000551706 RPS6KA4O75676 772 aa22.67■■□□□ 1.22
CDK4-208ENST00000551706 CYP19A1P11511 503 aaPredicted RBP22.67■■□□□ 1.22
CDK4-208ENST00000551706 C16orf71Q8IYS4 520 aaPredicted RBP22.67■■□□□ 1.22
CDK4-208ENST00000551706 CCDC87Q9NVE4 849 aa22.67■■□□□ 1.22
CDK4-208ENST00000551706 SNRPA1P09661 255 aaKnown RBP22.66■■□□□ 1.22
CDK4-208ENST00000551706 CALD1Q05682 793 aaKnown RBP22.66■■□□□ 1.22
CDK4-208ENST00000551706 MIS18AQ9NYP9 233 aa22.66■■□□□ 1.22
CDK4-208ENST00000551706 TSPYL4Q9UJ04 414 aa22.66■■□□□ 1.22
CDK4-208ENST00000551706 BCS1LQ9Y276 419 aa22.66■■□□□ 1.22
CDK4-208ENST00000551706 PXDNLA1KZ92 1463 aa22.66■■□□□ 1.22
CDK4-208ENST00000551706 PCNTO95613 3336 aa22.65■■□□□ 1.22
CDK4-208ENST00000551706 NCBP3Q53F19 620 aaKnown RBP22.65■■□□□ 1.22
CDK4-208ENST00000551706 TRAPPC3LQ5T215 181 aa22.65■■□□□ 1.22
CDK4-208ENST00000551706 INTS5Q6P9B9 1019 aaKnown RBP22.65■■□□□ 1.22
CDK4-208ENST00000551706 ARHGAP27Q6ZUM4 889 aa22.65■■□□□ 1.22
CDK4-208ENST00000551706 FAM9BQ8IZU0 186 aa22.65■■□□□ 1.22
CDK4-208ENST00000551706 FSTL1Q12841 308 aa22.64■■□□□ 1.21
CDK4-208ENST00000551706 TGFB2P61812 414 aa22.63■■□□□ 1.21
CDK4-208ENST00000551706 KIF13BQ9NQT8 1826 aa22.62■■□□□ 1.21
CDK4-208ENST00000551706 EIF4A1P60842 406 aaKnown RBP22.62■■□□□ 1.21
CDK4-208ENST00000551706 CCDC27Q2M243 656 aa22.62■■□□□ 1.21
CDK4-208ENST00000551706 N4BP2Q86UW6 1770 aaPredicted RBP22.62■■□□□ 1.21
CDK4-208ENST00000551706 KIAA1551Q9HCM1 1747 aa22.62■■□□□ 1.21
CDK4-208ENST00000551706 MMP10P09238 476 aa22.61■■□□□ 1.21
CDK4-208ENST00000551706 A0A0G2JLW4 131 aa22.6■■□□□ 1.21
CDK4-208ENST00000551706 CHL1O00533 1208 aa22.6■■□□□ 1.21
CDK4-208ENST00000551706 RFC4P35249 363 aa22.6■■□□□ 1.21
CDK4-208ENST00000551706 ARHGEF1Q92888 912 aaKnown RBP22.6■■□□□ 1.21
CDK4-208ENST00000551706 ZBTB1Q9Y2K1 713 aa22.6■■□□□ 1.21
CDK4-208ENST00000551706 KDM3BQ7LBC6 1761 aa22.6■■□□□ 1.21
CDK4-208ENST00000551706 SOS1Q07889 1333 aaPredicted RBP22.59■■□□□ 1.21
CDK4-208ENST00000551706 NGEFQ8N5V2 710 aa22.59■■□□□ 1.21
CDK4-208ENST00000551706 CFAP44Q96MT7 982 aa22.59■■□□□ 1.21
CDK4-208ENST00000551706 MYH14Q7Z406 1995 aaKnown RBP22.59■■□□□ 1.21
CDK4-208ENST00000551706 LAS1LQ9Y4W2 734 aaKnown RBP22.58■■□□□ 1.21
CDK4-208ENST00000551706 USP16Q9Y5T5 823 aa22.58■■□□□ 1.21
CDK4-208ENST00000551706 CANXP27824 592 aaKnown RBP22.57■■□□□ 1.2
CDK4-208ENST00000551706 C9orf131Q5VYM1 1079 aa22.57■■□□□ 1.2
CDK4-208ENST00000551706 IFT57Q9NWB7 429 aa22.57■■□□□ 1.2
CDK4-208ENST00000551706 IL6STP40189 918 aaPredicted RBP22.56■■□□□ 1.2
CDK4-208ENST00000551706 GNAI1P63096 354 aa22.56■■□□□ 1.2
CDK4-208ENST00000551706 NPM2Q86SE8 214 aaKnown RBP22.56■■□□□ 1.2
CDK4-208ENST00000551706 KDM2BQ8NHM5 1336 aa22.56■■□□□ 1.2
CDK4-208ENST00000551706 COL15A1P39059 1388 aa22.55■■□□□ 1.2
CDK4-208ENST00000551706 PRAMEF22A3QJZ6 481 aa22.55■■□□□ 1.2
CDK4-208ENST00000551706 EIF5P55010 431 aaKnown RBP22.55■■□□□ 1.2
CDK4-208ENST00000551706 WWC1Q8IX03 1113 aa22.55■■□□□ 1.2
CDK4-208ENST00000551706 C10orf71Q711Q0 1435 aa22.55■■□□□ 1.2
CDK4-208ENST00000551706 A0A087WZG4 1122 aa22.54■■□□□ 1.2
CDK4-208ENST00000551706 A1BGP04217 495 aa22.54■■□□□ 1.2
CDK4-208ENST00000551706 ZNF853P0CG23 659 aa22.54■■□□□ 1.2
CDK4-208ENST00000551706 DPEP1P16444 411 aa22.54■■□□□ 1.2
CDK4-208ENST00000551706 NLGN1Q8N2Q7 840 aa22.54■■□□□ 1.2
CDK4-208ENST00000551706 USP42Q9H9J4 1324 aaKnown RBP22.54■■□□□ 1.2
CDK4-208ENST00000551706 ZPR1O75312 459 aa22.53■■□□□ 1.2
CDK4-208ENST00000551706 MIER1Q8N108 512 aa22.52■■□□□ 1.2
CDK4-208ENST00000551706 RRAGCQ9HB90 399 aa22.52■■□□□ 1.2
CDK4-208ENST00000551706 IL16Q14005 1332 aa22.52■■□□□ 1.2
CDK4-208ENST00000551706 BRCA1P38398 1863 aaKnown RBP22.51■■□□□ 1.19
CDK4-208ENST00000551706 GYS1P13807 737 aa22.51■■□□□ 1.19
CDK4-208ENST00000551706 MBIPQ9NS73 344 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms