RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 BEND3Q5T5X7 828 aa24.69■■□□□ 1.54
SSH1-209ENST00000551165 CHD1LQ86WJ1 897 aa24.69■■□□□ 1.54
SSH1-209ENST00000551165 RPAP2Q8IXW5 612 aaPredicted RBP24.69■■□□□ 1.54
SSH1-209ENST00000551165 GCC1Q96CN9 775 aa24.69■■□□□ 1.54
SSH1-209ENST00000551165 N4BP2Q86UW6 1770 aaPredicted RBP24.69■■□□□ 1.54
SSH1-209ENST00000551165 MAP3K2Q9Y2U5 619 aa24.68■■□□□ 1.54
SSH1-209ENST00000551165 SRCIN1Q9C0H9 1055 aa24.68■■□□□ 1.54
SSH1-209ENST00000551165 HYPKQ9NX55 129 aa24.68■■□□□ 1.54
SSH1-209ENST00000551165 NRAPQ86VF7 1730 aa24.68■■□□□ 1.54
SSH1-209ENST00000551165 DCTPP1Q9H773 170 aa24.67■■□□□ 1.54
SSH1-209ENST00000551165 PTCD1O75127 700 aaKnown RBP24.67■■□□□ 1.54
SSH1-209ENST00000551165 GNAI2P04899 355 aa24.67■■□□□ 1.54
SSH1-209ENST00000551165 LRRFIP2Q9Y608 721 aaKnown RBP24.66■■□□□ 1.54
SSH1-209ENST00000551165 KSR2Q6VAB6 950 aa24.65■■□□□ 1.54
SSH1-209ENST00000551165 AEBP2Q6ZN18 517 aaPredicted RBP24.65■■□□□ 1.54
SSH1-209ENST00000551165 LRP10Q7Z4F1 713 aa24.65■■□□□ 1.54
SSH1-209ENST00000551165 NPM2Q86SE8 214 aaKnown RBP24.65■■□□□ 1.54
SSH1-209ENST00000551165 BCL11AQ9H165 835 aa24.65■■□□□ 1.54
SSH1-209ENST00000551165 SPATA31A1Q5TZJ5 1347 aa24.65■■□□□ 1.54
SSH1-209ENST00000551165 GNAI3P08754 354 aa24.65■■□□□ 1.54
SSH1-209ENST00000551165 KCPQ6ZWJ8 1503 aa24.65■■□□□ 1.54
SSH1-209ENST00000551165 NBPF7P0C2Y1 421 aaPredicted RBP24.64■■□□□ 1.54
SSH1-209ENST00000551165 XAGE3Q8WTP9 111 aa24.64■■□□□ 1.53
SSH1-209ENST00000551165 PIGBQ92521 554 aa24.64■■□□□ 1.53
SSH1-209ENST00000551165 PNMA6EA0A0J9YXQ4 647 aa24.63■■□□□ 1.53
SSH1-209ENST00000551165 EXOC5O00471 708 aa24.63■■□□□ 1.53
SSH1-209ENST00000551165 COPS6Q7L5N1 327 aa24.63■■□□□ 1.53
SSH1-209ENST00000551165 TMOD3Q9NYL9 352 aa24.63■■□□□ 1.53
SSH1-209ENST00000551165 UBR2Q8IWV8 1755 aa24.63■■□□□ 1.53
SSH1-209ENST00000551165 PAPPAQ13219 1627 aa24.63■■□□□ 1.53
SSH1-209ENST00000551165 APBB1O00213 710 aa24.62■■□□□ 1.53
SSH1-209ENST00000551165 CWF19L2Q2TBE0 894 aaKnown RBP24.62■■□□□ 1.53
SSH1-209ENST00000551165 ASAP1Q9ULH1 1129 aa24.62■■□□□ 1.53
SSH1-209ENST00000551165 UBTFL1P0CB47 393 aaPredicted RBP24.62■■□□□ 1.53
SSH1-209ENST00000551165 WNK3Q9BYP7 1800 aa24.61■■□□□ 1.53
SSH1-209ENST00000551165 SEC24BO95487 1268 aa24.61■■□□□ 1.53
SSH1-209ENST00000551165 SLIT2O94813 1529 aa24.61■■□□□ 1.53
SSH1-209ENST00000551165 NBPF26B4DH59 902 aa24.6■■□□□ 1.53
SSH1-209ENST00000551165 NBPF14Q5TI25 921 aa24.6■■□□□ 1.53
SSH1-209ENST00000551165 NBPF10Q6P3W6 841 aaKnown RBP24.6■■□□□ 1.53
SSH1-209ENST00000551165 NBPF15Q8N660 670 aa24.6■■□□□ 1.53
SSH1-209ENST00000551165 CERKQ8TCT0 537 aa24.6■■□□□ 1.53
SSH1-209ENST00000551165 CCDC9Q9Y3X0 531 aaKnown RBP24.6■■□□□ 1.53
SSH1-209ENST00000551165 TNS2Q63HR2 1409 aa24.6■■□□□ 1.53
SSH1-209ENST00000551165 SMARCA5O60264 1052 aaPredicted RBP24.59■■□□□ 1.53
SSH1-209ENST00000551165 C16orf71Q8IYS4 520 aaPredicted RBP24.59■■□□□ 1.53
SSH1-209ENST00000551165 C8orf37Q96NL8 207 aa24.59■■□□□ 1.53
SSH1-209ENST00000551165 SPATA31A5Q5VU36 1347 aa24.59■■□□□ 1.53
SSH1-209ENST00000551165 SPATA31A7Q8IWB4 1347 aa24.59■■□□□ 1.53
SSH1-209ENST00000551165 A1BGP04217 495 aa24.58■■□□□ 1.53
SSH1-209ENST00000551165 KAT6BQ8WYB5 2073 aa24.58■■□□□ 1.53
SSH1-209ENST00000551165 ITGB4P16144 1822 aa24.58■■□□□ 1.53
SSH1-209ENST00000551165 MSH5O43196 834 aa24.58■■□□□ 1.52
SSH1-209ENST00000551165 ATP8B2P98198 1209 aa24.58■■□□□ 1.52
SSH1-209ENST00000551165 ATG3Q9NT62 314 aa24.58■■□□□ 1.52
SSH1-209ENST00000551165 LAMB4A4D0S4 1761 aa24.58■■□□□ 1.52
SSH1-209ENST00000551165 RIC3Q7Z5B4 369 aa24.57■■□□□ 1.52
SSH1-209ENST00000551165 JCADQ9P266 1359 aa24.57■■□□□ 1.52
SSH1-209ENST00000551165 DDX58O95786 925 aaKnown RBP24.57■■□□□ 1.52
SSH1-209ENST00000551165 IGKV5-2P06315 115 aa24.57■■□□□ 1.52
SSH1-209ENST00000551165 EXOC6BQ9Y2D4 811 aa24.57■■□□□ 1.52
SSH1-209ENST00000551165 HMMRO75330 724 aa24.56■■□□□ 1.52
SSH1-209ENST00000551165 OTUD7AQ8TE49 926 aaPredicted RBP24.56■■□□□ 1.52
SSH1-209ENST00000551165 SYTL4Q96C24 671 aaPredicted RBP24.55■■□□□ 1.52
SSH1-209ENST00000551165 NGLY1Q96IV0 654 aa24.55■■□□□ 1.52
SSH1-209ENST00000551165 NWD2Q9ULI1 1742 aa24.55■■□□□ 1.52
SSH1-209ENST00000551165 DDB1Q16531 1140 aa24.54■■□□□ 1.52
SSH1-209ENST00000551165 THRAP3Q9Y2W1 955 aaKnown RBP24.54■■□□□ 1.52
SSH1-209ENST00000551165 ANKRD13DQ6ZTN6 518 aa24.54■■□□□ 1.52
SSH1-209ENST00000551165 LINS1Q8NG48 757 aa24.54■■□□□ 1.52
SSH1-209ENST00000551165 ALDH1L1O75891 902 aa24.53■■□□□ 1.52
SSH1-209ENST00000551165 PRIM1P49642 420 aaKnown RBP24.53■■□□□ 1.52
SSH1-209ENST00000551165 PPP1R42Q7Z4L9 355 aa24.53■■□□□ 1.52
SSH1-209ENST00000551165 UNC5CLQ8IV45 518 aa24.53■■□□□ 1.52
SSH1-209ENST00000551165 BCL9O00512 1426 aa24.53■■□□□ 1.52
SSH1-209ENST00000551165 BCL9LQ86UU0 1499 aa24.53■■□□□ 1.52
SSH1-209ENST00000551165 MARCH10Q8NA82 808 aaPredicted RBP24.52■■□□□ 1.52
SSH1-209ENST00000551165 MYD88Q99836 296 aa24.52■■□□□ 1.52
SSH1-209ENST00000551165 C9orf78Q9NZ63 289 aaPredicted RBP24.52■■□□□ 1.52
SSH1-209ENST00000551165 LRP6O75581 1613 aa24.52■■□□□ 1.52
SSH1-209ENST00000551165 ANP32AP39687 249 aaKnown RBP24.52■■□□□ 1.52
SSH1-209ENST00000551165 TTLL7Q6ZT98 887 aa24.51■■□□□ 1.51
SSH1-209ENST00000551165 PLEKHM2Q8IWE5 1019 aa24.51■■□□□ 1.51
SSH1-209ENST00000551165 RBM42Q9BTD8 480 aaKnown RBP24.51■■□□□ 1.51
SSH1-209ENST00000551165 DNAJC10Q8IXB1 793 aa24.51■■□□□ 1.51
SSH1-209ENST00000551165 SLC4A9Q96Q91 983 aa24.51■■□□□ 1.51
SSH1-209ENST00000551165 METTL22Q9BUU2 404 aaPredicted RBP24.51■■□□□ 1.51
SSH1-209ENST00000551165 CDCA7Q9BWT1 371 aaPredicted RBP24.51■■□□□ 1.51
SSH1-209ENST00000551165 SSH3Q8TE77 659 aa24.5■■□□□ 1.51
SSH1-209ENST00000551165 ACSBG1Q96GR2 724 aa24.5■■□□□ 1.51
SSH1-209ENST00000551165 NEURL1BA8MQ27 555 aa24.49■■□□□ 1.51
SSH1-209ENST00000551165 FAM98CQ17RN3 349 aaKnown RBP24.49■■□□□ 1.51
SSH1-209ENST00000551165 DOT1LQ8TEK3 1739 aa24.49■■□□□ 1.51
SSH1-209ENST00000551165 GRM8O00222 908 aa24.49■■□□□ 1.51
SSH1-209ENST00000551165 BARGINQ6ZT62 677 aa24.49■■□□□ 1.51
SSH1-209ENST00000551165 JARID2Q92833 1246 aaPredicted RBP24.49■■□□□ 1.51
SSH1-209ENST00000551165 KAZALD1Q96I82 304 aa24.49■■□□□ 1.51
SSH1-209ENST00000551165 SRGAP3O43295 1099 aa24.48■■□□□ 1.51
SSH1-209ENST00000551165 HSPA1LP34931 641 aa24.48■■□□□ 1.51
SSH1-209ENST00000551165 A0A0G2JS52 829 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms