RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 ARHGAP27Q6ZUM4 889 aa15.66■□□□□ 0.1
PRPF40B-212ENST00000551111 ZBTB1Q9Y2K1 713 aa15.66■□□□□ 0.1
PRPF40B-212ENST00000551111 IL17REQ8NFR9 667 aa15.65■□□□□ 0.1
PRPF40B-212ENST00000551111 BCL2L12Q9HB09 334 aa15.65■□□□□ 0.1
PRPF40B-212ENST00000551111 NRXN2Q9P2S2 1712 aa15.65■□□□□ 0.1
PRPF40B-212ENST00000551111 U2SURPO15042 1029 aaKnown RBP15.63■□□□□ 0.09
PRPF40B-212ENST00000551111 NFIXQ14938 502 aa15.63■□□□□ 0.09
PRPF40B-212ENST00000551111 ANKRD31Q8N7Z5 1873 aa15.63■□□□□ 0.09
PRPF40B-212ENST00000551111 DLEC1Q9Y238 1755 aa15.62■□□□□ 0.09
PRPF40B-212ENST00000551111 PHACTR3Q96KR7 559 aa15.62■□□□□ 0.09
PRPF40B-212ENST00000551111 COL15A1P39059 1388 aa15.62■□□□□ 0.09
PRPF40B-212ENST00000551111 NPC1L1Q9UHC9 1359 aa15.62■□□□□ 0.09
PRPF40B-212ENST00000551111 ZPR1O75312 459 aa15.61■□□□□ 0.09
PRPF40B-212ENST00000551111 CANXP27824 592 aaKnown RBP15.61■□□□□ 0.09
PRPF40B-212ENST00000551111 ZNF496Q96IT1 587 aaPredicted RBP15.61■□□□□ 0.09
PRPF40B-212ENST00000551111 NMRK2Q9NPI5 230 aa15.61■□□□□ 0.09
PRPF40B-212ENST00000551111 PIM2Q9P1W9 311 aa15.61■□□□□ 0.09
PRPF40B-212ENST00000551111 NARFQ9UHQ1 456 aa15.61■□□□□ 0.09
PRPF40B-212ENST00000551111 KCNQ3O43525 872 aa15.6■□□□□ 0.09
PRPF40B-212ENST00000551111 HSPA6P17066 643 aa15.6■□□□□ 0.09
PRPF40B-212ENST00000551111 C9orf131Q5VYM1 1079 aa15.6■□□□□ 0.09
PRPF40B-212ENST00000551111 CACNA1SQ13698 1873 aa15.59■□□□□ 0.09
PRPF40B-212ENST00000551111 DALRD3Q5D0E6 543 aaKnown RBP15.59■□□□□ 0.09
PRPF40B-212ENST00000551111 CARMIL3Q8ND23 1372 aa15.59■□□□□ 0.09
PRPF40B-212ENST00000551111 PRELPP51888 382 aa15.58■□□□□ 0.08
PRPF40B-212ENST00000551111 EIF5P55010 431 aaKnown RBP15.58■□□□□ 0.08
PRPF40B-212ENST00000551111 VSIG10Q8N0Z9 540 aa15.58■□□□□ 0.08
PRPF40B-212ENST00000551111 DLG5Q8TDM6 1919 aa15.57■□□□□ 0.08
PRPF40B-212ENST00000551111 GNAT3A8MTJ3 354 aa15.57■□□□□ 0.08
PRPF40B-212ENST00000551111 SERPINB2P05120 415 aa15.57■□□□□ 0.08
PRPF40B-212ENST00000551111 ZNF790Q6PG37 636 aa15.57■□□□□ 0.08
PRPF40B-212ENST00000551111 BICDL1Q6ZP65 573 aa15.57■□□□□ 0.08
PRPF40B-212ENST00000551111 CCDC24Q8N4L8 307 aa15.57■□□□□ 0.08
PRPF40B-212ENST00000551111 RSPH6AQ9H0K4 717 aa15.57■□□□□ 0.08
PRPF40B-212ENST00000551111 SCN7AQ01118 1682 aa15.57■□□□□ 0.08
PRPF40B-212ENST00000551111 COL11A2P13942 1736 aaPredicted RBP15.57■□□□□ 0.08
PRPF40B-212ENST00000551111 A1BGP04217 495 aa15.56■□□□□ 0.08
PRPF40B-212ENST00000551111 PRKAR2BP31323 418 aa15.56■□□□□ 0.08
PRPF40B-212ENST00000551111 HEG1Q9ULI3 1381 aa15.56■□□□□ 0.08
PRPF40B-212ENST00000551111 CEMIPQ8WUJ3 1361 aa15.55■□□□□ 0.08
PRPF40B-212ENST00000551111 PRAMEF22A3QJZ6 481 aa15.55■□□□□ 0.08
PRPF40B-212ENST00000551111 PIP4K2AP48426 406 aaPredicted RBP15.55■□□□□ 0.08
PRPF40B-212ENST00000551111 RASSF7Q02833 373 aa15.55■□□□□ 0.08
PRPF40B-212ENST00000551111 TEFQ10587 303 aa15.55■□□□□ 0.08
PRPF40B-212ENST00000551111 TBC1D9BQ66K14 1250 aa15.55■□□□□ 0.08
PRPF40B-212ENST00000551111 TTC5Q8N0Z6 440 aa15.55■□□□□ 0.08
PRPF40B-212ENST00000551111 RNF181Q9P0P0 153 aa15.55■□□□□ 0.08
PRPF40B-212ENST00000551111 TBC1D2BQ9UPU7 963 aa15.55■□□□□ 0.08
PRPF40B-212ENST00000551111 GAS2L2Q8NHY3 880 aa15.54■□□□□ 0.08
PRPF40B-212ENST00000551111 ZNF330Q9Y3S2 320 aaPredicted RBP15.54■□□□□ 0.08
PRPF40B-212ENST00000551111 BCORQ6W2J9 1755 aa15.54■□□□□ 0.08
PRPF40B-212ENST00000551111 SLX4Q8IY92 1834 aa15.53■□□□□ 0.08
PRPF40B-212ENST00000551111 STARD3NLO95772 234 aa15.53■□□□□ 0.08
PRPF40B-212ENST00000551111 PPP2R1AP30153 589 aa15.53■□□□□ 0.08
PRPF40B-212ENST00000551111 FER1L6Q2WGJ9 1857 aa15.52■□□□□ 0.08
PRPF40B-212ENST00000551111 TOMM70O94826 608 aa15.52■□□□□ 0.08
PRPF40B-212ENST00000551111 DCTN1Q14203 1278 aa15.52■□□□□ 0.08
PRPF40B-212ENST00000551111 MCM10Q7L590 875 aa15.52■□□□□ 0.08
PRPF40B-212ENST00000551111 USP16Q9Y5T5 823 aa15.52■□□□□ 0.08
PRPF40B-212ENST00000551111 DICER1Q9UPY3 1922 aaKnown RBP15.52■□□□□ 0.07
PRPF40B-212ENST00000551111 TIAM2Q8IVF5 1701 aa15.51■□□□□ 0.07
PRPF40B-212ENST00000551111 WDR90Q96KV7 1748 aa15.51■□□□□ 0.07
PRPF40B-212ENST00000551111 C2CD5Q86YS7 1000 aa15.51■□□□□ 0.07
PRPF40B-212ENST00000551111 RRAGCQ9HB90 399 aa15.51■□□□□ 0.07
PRPF40B-212ENST00000551111 TNRC6CQ9HCJ0 1690 aaKnown RBP15.51■□□□□ 0.07
PRPF40B-212ENST00000551111 BTBD11A6QL63 1104 aa15.5■□□□□ 0.07
PRPF40B-212ENST00000551111 U2AF1L5P0DN76 240 aaPredicted RBP15.5■□□□□ 0.07
PRPF40B-212ENST00000551111 HTRA3P83110 453 aa15.5■□□□□ 0.07
PRPF40B-212ENST00000551111 U2AF1Q01081 240 aaKnown RBP eCLIP15.5■□□□□ 0.07
PRPF40B-212ENST00000551111 FMNL2Q96PY5 1086 aa15.5■□□□□ 0.07
PRPF40B-212ENST00000551111 NFKBIEO00221 500 aa15.49■□□□□ 0.07
PRPF40B-212ENST00000551111 CAMTA2O94983 1202 aa15.49■□□□□ 0.07
PRPF40B-212ENST00000551111 DNAJC5GQ8N7S2 189 aa15.49■□□□□ 0.07
PRPF40B-212ENST00000551111 TTLL6Q8N841 843 aa15.49■□□□□ 0.07
PRPF40B-212ENST00000551111 ZNF219Q9P2Y4 722 aaPredicted RBP15.49■□□□□ 0.07
PRPF40B-212ENST00000551111 IL6STP40189 918 aaPredicted RBP15.48■□□□□ 0.07
PRPF40B-212ENST00000551111 PRR5LQ6MZQ0 368 aa15.48■□□□□ 0.07
PRPF40B-212ENST00000551111 CFAP53Q96M91 514 aa15.48■□□□□ 0.07
PRPF40B-212ENST00000551111 TEX13AQ9BXU3 409 aaPredicted RBP15.48■□□□□ 0.07
PRPF40B-212ENST00000551111 A0A087WZG4 1122 aa15.47■□□□□ 0.07
PRPF40B-212ENST00000551111 H0YIN7 160 aa15.47■□□□□ 0.07
PRPF40B-212ENST00000551111 MIS18AQ9NYP9 233 aa15.47■□□□□ 0.07
PRPF40B-212ENST00000551111 ARFGEF2Q9Y6D5 1785 aa15.47■□□□□ 0.07
PRPF40B-212ENST00000551111 RBM46Q8TBY0 533 aaKnown RBP15.46■□□□□ 0.07
PRPF40B-212ENST00000551111 ZNF622Q969S3 477 aaKnown RBP eCLIP15.46■□□□□ 0.07
PRPF40B-212ENST00000551111 PCNTO95613 3336 aa15.46■□□□□ 0.06
PRPF40B-212ENST00000551111 NUP98P52948 1817 aa15.45■□□□□ 0.06
PRPF40B-212ENST00000551111 KDM3BQ7LBC6 1761 aa15.45■□□□□ 0.06
PRPF40B-212ENST00000551111 NBPF26B4DH59 902 aa15.45■□□□□ 0.06
PRPF40B-212ENST00000551111 C21orf2O43822 256 aa15.45■□□□□ 0.06
PRPF40B-212ENST00000551111 LMNB1P20700 586 aa15.45■□□□□ 0.06
PRPF40B-212ENST00000551111 APLP1P51693 650 aa15.45■□□□□ 0.06
PRPF40B-212ENST00000551111 NBPF10Q6P3W6 841 aaKnown RBP15.45■□□□□ 0.06
PRPF40B-212ENST00000551111 DZIP3Q86Y13 1208 aaKnown RBP15.45■□□□□ 0.06
PRPF40B-212ENST00000551111 NBPF15Q8N660 670 aa15.45■□□□□ 0.06
PRPF40B-212ENST00000551111 BRIP1Q9BX63 1249 aa15.45■□□□□ 0.06
PRPF40B-212ENST00000551111 NUDCQ9Y266 331 aa15.45■□□□□ 0.06
PRPF40B-212ENST00000551111 KDM2BQ8NHM5 1336 aa15.44■□□□□ 0.06
PRPF40B-212ENST00000551111 LAMB4A4D0S4 1761 aa15.44■□□□□ 0.06
PRPF40B-212ENST00000551111 POTECB2RU33 542 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms