RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 COL18A1P39060 1754 aa17.42■□□□□ 0.38
CALCOCO1-218ENST00000550804 IBTKQ9P2D0 1353 aaPredicted RBP17.41■□□□□ 0.38
CALCOCO1-218ENST00000550804 PROSER3Q2NL68 480 aa17.41■□□□□ 0.38
CALCOCO1-218ENST00000550804 SURF6O75683 361 aaKnown RBP17.41■□□□□ 0.38
CALCOCO1-218ENST00000550804 MAP4K4O95819 1239 aaPredicted RBP17.41■□□□□ 0.38
CALCOCO1-218ENST00000550804 PKP1Q13835 747 aa17.41■□□□□ 0.38
CALCOCO1-218ENST00000550804 BEND3Q5T5X7 828 aa17.41■□□□□ 0.38
CALCOCO1-218ENST00000550804 CIZ1Q9ULV3 898 aaPredicted RBP17.41■□□□□ 0.38
CALCOCO1-218ENST00000550804 CRYBG1Q9Y4K1 1723 aa17.41■□□□□ 0.38
CALCOCO1-218ENST00000550804 XRCC6P12956 609 aaKnown RBP eCLIP17.4■□□□□ 0.38
CALCOCO1-218ENST00000550804 NLRP2Q9NX02 1062 aa17.4■□□□□ 0.38
CALCOCO1-218ENST00000550804 RNMTO43148 476 aaKnown RBP17.4■□□□□ 0.38
CALCOCO1-218ENST00000550804 SRGAP3O43295 1099 aa17.4■□□□□ 0.38
CALCOCO1-218ENST00000550804 REC8O95072 547 aa17.4■□□□□ 0.38
CALCOCO1-218ENST00000550804 IL25Q9H293 177 aa17.4■□□□□ 0.38
CALCOCO1-218ENST00000550804 CPDO75976 1380 aa17.39■□□□□ 0.38
CALCOCO1-218ENST00000550804 LMO7Q8WWI1 1683 aa17.39■□□□□ 0.37
CALCOCO1-218ENST00000550804 ZGPATQ8N5A5 531 aaKnown RBP17.39■□□□□ 0.37
CALCOCO1-218ENST00000550804 SSH3Q8TE77 659 aa17.39■□□□□ 0.37
CALCOCO1-218ENST00000550804 DNAAF4Q8WXU2 420 aa17.39■□□□□ 0.37
CALCOCO1-218ENST00000550804 PANK2Q9BZ23 570 aa17.38■□□□□ 0.37
CALCOCO1-218ENST00000550804 SOS1Q07889 1333 aaPredicted RBP17.38■□□□□ 0.37
CALCOCO1-218ENST00000550804 DDX11L8A8MPP1 907 aa17.38■□□□□ 0.37
CALCOCO1-218ENST00000550804 C1orf141Q5JVX7 400 aa17.38■□□□□ 0.37
CALCOCO1-218ENST00000550804 CHMLP26374 656 aa17.37■□□□□ 0.37
CALCOCO1-218ENST00000550804 ESYT1Q9BSJ8 1104 aa17.37■□□□□ 0.37
CALCOCO1-218ENST00000550804 PALD1Q9ULE6 856 aa17.37■□□□□ 0.37
CALCOCO1-218ENST00000550804 FSD2A1L4K1 749 aa17.37■□□□□ 0.37
CALCOCO1-218ENST00000550804 GOLGA6L3A6NEY3 463 aa17.37■□□□□ 0.37
CALCOCO1-218ENST00000550804 CSB-PGBD3P0DP91 1061 aa17.37■□□□□ 0.37
CALCOCO1-218ENST00000550804 GIGYF1O75420 1035 aaPredicted RBP17.36■□□□□ 0.37
CALCOCO1-218ENST00000550804 POLA2Q14181 598 aa17.36■□□□□ 0.37
CALCOCO1-218ENST00000550804 RAPGEF4Q8WZA2 1011 aa17.36■□□□□ 0.37
CALCOCO1-218ENST00000550804 CHAMP1Q96JM3 812 aa17.36■□□□□ 0.37
CALCOCO1-218ENST00000550804 GBP4Q96PP9 640 aa17.36■□□□□ 0.37
CALCOCO1-218ENST00000550804 STAP2Q9UGK3 403 aa17.36■□□□□ 0.37
CALCOCO1-218ENST00000550804 NEK4P51957 841 aa17.35■□□□□ 0.37
CALCOCO1-218ENST00000550804 SLC39A6Q13433 755 aa17.35■□□□□ 0.37
CALCOCO1-218ENST00000550804 CWF19L2Q2TBE0 894 aaKnown RBP17.35■□□□□ 0.37
CALCOCO1-218ENST00000550804 RHPN1Q8TCX5 695 aa17.35■□□□□ 0.37
CALCOCO1-218ENST00000550804 ANO2Q9NQ90 1003 aa17.35■□□□□ 0.37
CALCOCO1-218ENST00000550804 MAP3K2Q9Y2U5 619 aa17.35■□□□□ 0.37
CALCOCO1-218ENST00000550804 ADCY9O60503 1353 aa17.35■□□□□ 0.37
CALCOCO1-218ENST00000550804 ABCC6O95255 1503 aa17.35■□□□□ 0.37
CALCOCO1-218ENST00000550804 AIMP1Q12904 312 aaKnown RBP17.34■□□□□ 0.37
CALCOCO1-218ENST00000550804 FAM208AQ9UK61 1670 aaKnown RBP17.34■□□□□ 0.37
CALCOCO1-218ENST00000550804 ST18O60284 1047 aa17.33■□□□□ 0.37
CALCOCO1-218ENST00000550804 HOXB7P09629 217 aa17.33■□□□□ 0.37
CALCOCO1-218ENST00000550804 NOL8Q76FK4 1167 aaKnown RBP17.33■□□□□ 0.37
CALCOCO1-218ENST00000550804 DBF4Q9UBU7 674 aaPredicted RBP17.33■□□□□ 0.37
CALCOCO1-218ENST00000550804 EIF5BO60841 1220 aaKnown RBP17.33■□□□□ 0.36
CALCOCO1-218ENST00000550804 BAG4O95429 457 aaKnown RBP17.33■□□□□ 0.36
CALCOCO1-218ENST00000550804 TATP17735 454 aaPredicted RBP17.33■□□□□ 0.36
CALCOCO1-218ENST00000550804 GAS2L3Q86XJ1 694 aa17.33■□□□□ 0.36
CALCOCO1-218ENST00000550804 PRDM11Q9NQV5 511 aa17.33■□□□□ 0.36
CALCOCO1-218ENST00000550804 L1TD1Q5T7N2 865 aaKnown RBP17.32■□□□□ 0.36
CALCOCO1-218ENST00000550804 MEGF6O75095 1541 aa17.32■□□□□ 0.36
CALCOCO1-218ENST00000550804 PA2G4Q9UQ80 394 aaKnown RBP17.32■□□□□ 0.36
CALCOCO1-218ENST00000550804 PI4K2BQ8TCG2 481 aa17.31■□□□□ 0.36
CALCOCO1-218ENST00000550804 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.31■□□□□ 0.367e-7■■■■□ 19.4
CALCOCO1-218ENST00000550804 OVOS2A0A0G2JMS6 1433 aa17.31■□□□□ 0.36
CALCOCO1-218ENST00000550804 FOXD4L5Q5VV16 416 aaPredicted RBP17.31■□□□□ 0.36
CALCOCO1-218ENST00000550804 UBE2Q2Q8WVN8 375 aa17.31■□□□□ 0.36
CALCOCO1-218ENST00000550804 FOXD4L4Q8WXT5 416 aaPredicted RBP17.31■□□□□ 0.36
CALCOCO1-218ENST00000550804 C9orf78Q9NZ63 289 aaPredicted RBP17.31■□□□□ 0.36
CALCOCO1-218ENST00000550804 ZDHHC9Q9Y397 364 aa17.31■□□□□ 0.36
CALCOCO1-218ENST00000550804 NFATC2IPQ8NCF5 419 aa17.3■□□□□ 0.36
CALCOCO1-218ENST00000550804 UPF3BQ9BZI7 483 aaKnown RBP17.3■□□□□ 0.36
CALCOCO1-218ENST00000550804 SPG7Q9UQ90 795 aa17.3■□□□□ 0.36
CALCOCO1-218ENST00000550804 NHSL1Q5SYE7 1610 aa17.3■□□□□ 0.36
CALCOCO1-218ENST00000550804 KDM3BQ7LBC6 1761 aa17.3■□□□□ 0.36
CALCOCO1-218ENST00000550804 RAB11FIP3O75154 756 aa17.3■□□□□ 0.36
CALCOCO1-218ENST00000550804 PHKG2P15735 406 aa17.3■□□□□ 0.36
CALCOCO1-218ENST00000550804 MCTP1Q6DN14 999 aa17.3■□□□□ 0.36
CALCOCO1-218ENST00000550804 TMX3Q96JJ7 454 aa17.3■□□□□ 0.36
CALCOCO1-218ENST00000550804 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.3■□□□□ 0.36
CALCOCO1-218ENST00000550804 CYP2E1P05181 493 aaPredicted RBP17.29■□□□□ 0.36
CALCOCO1-218ENST00000550804 PIP4K2AP48426 406 aaPredicted RBP17.29■□□□□ 0.36
CALCOCO1-218ENST00000550804 PDIA6Q15084 440 aa17.29■□□□□ 0.36
CALCOCO1-218ENST00000550804 KSR2Q6VAB6 950 aa17.29■□□□□ 0.36
CALCOCO1-218ENST00000550804 KIF1BPQ96EK5 621 aa17.29■□□□□ 0.36
CALCOCO1-218ENST00000550804 WDR17Q8IZU2 1322 aa17.28■□□□□ 0.36
CALCOCO1-218ENST00000550804 MYL6BP14649 208 aa17.28■□□□□ 0.36
CALCOCO1-218ENST00000550804 OS9Q13438 667 aaPredicted RBP17.28■□□□□ 0.36
CALCOCO1-218ENST00000550804 ADAMTS7Q9UKP4 1686 aa17.28■□□□□ 0.36
CALCOCO1-218ENST00000550804 PXDNLA1KZ92 1463 aa17.28■□□□□ 0.36
CALCOCO1-218ENST00000550804 IFNL2Q8IZJ0 200 aa17.27■□□□□ 0.36
CALCOCO1-218ENST00000550804 HEG1Q9ULI3 1381 aa17.27■□□□□ 0.36
CALCOCO1-218ENST00000550804 CYP27B1O15528 508 aa17.27■□□□□ 0.35
CALCOCO1-218ENST00000550804 CLEC17AQ6ZS10 378 aa17.27■□□□□ 0.35
CALCOCO1-218ENST00000550804 KAZALD1Q96I82 304 aa17.27■□□□□ 0.35
CALCOCO1-218ENST00000550804 KDM6AO15550 1401 aaPredicted RBP17.26■□□□□ 0.35
CALCOCO1-218ENST00000550804 NUCB2P80303 420 aa17.26■□□□□ 0.35
CALCOCO1-218ENST00000550804 GRPEL1Q9HAV7 217 aa17.26■□□□□ 0.35
CALCOCO1-218ENST00000550804 DDX49Q9Y6V7 483 aaKnown RBP17.26■□□□□ 0.35
CALCOCO1-218ENST00000550804 PLEKHG2Q9H7P9 1386 aa17.26■□□□□ 0.35
CALCOCO1-218ENST00000550804 COL5A2P05997 1499 aaPredicted RBP17.26■□□□□ 0.35
CALCOCO1-218ENST00000550804 ZNF790Q6PG37 636 aa17.26■□□□□ 0.35
CALCOCO1-218ENST00000550804 CWC27Q6UX04 472 aaKnown RBP17.26■□□□□ 0.35
CALCOCO1-218ENST00000550804 TOM1L2Q6ZVM7 507 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms