RNA–Protein interactions for RNA: ENST00000550715.5

LETMD1-225, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 907 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-225ENST00000550715 ZBTB7AO95365 584 aa11.73□□□□□ -0.53
LETMD1-225ENST00000550715 USP32Q8NFA0 1604 aa11.73□□□□□ -0.53
LETMD1-225ENST00000550715 SLC27A5Q9Y2P5 690 aa11.73□□□□□ -0.53
LETMD1-225ENST00000550715 RAD21O60216 631 aa11.72□□□□□ -0.53
LETMD1-225ENST00000550715 KRT28Q7Z3Y7 464 aa11.72□□□□□ -0.53
LETMD1-225ENST00000550715 PRR14Q9BWN1 585 aa11.72□□□□□ -0.53
LETMD1-225ENST00000550715 BTG4Q9NY30 223 aa11.72□□□□□ -0.53
LETMD1-225ENST00000550715 COG6Q9Y2V7 657 aa11.72□□□□□ -0.53
LETMD1-225ENST00000550715 WBP1LQ9NX94 342 aa11.71□□□□□ -0.53
LETMD1-225ENST00000550715 NUP188Q5SRE5 1749 aa11.71□□□□□ -0.54
LETMD1-225ENST00000550715 SPATA31A5Q5VU36 1347 aa11.7□□□□□ -0.54
LETMD1-225ENST00000550715 SPATA31A7Q8IWB4 1347 aa11.7□□□□□ -0.54
LETMD1-225ENST00000550715 CTDSPL2Q05D32 466 aa11.7□□□□□ -0.54
LETMD1-225ENST00000550715 KCTD12Q96CX2 325 aaKnown RBP11.7□□□□□ -0.54
LETMD1-225ENST00000550715 PLCH1Q4KWH8 1693 aa11.7□□□□□ -0.54
LETMD1-225ENST00000550715 NRKQ7Z2Y5 1582 aa11.7□□□□□ -0.54
LETMD1-225ENST00000550715 NWD2Q9ULI1 1742 aa11.69□□□□□ -0.54
LETMD1-225ENST00000550715 LRPPRCP42704 1394 aaKnown RBP11.69□□□□□ -0.54
LETMD1-225ENST00000550715 RREB1Q92766 1687 aa11.69□□□□□ -0.54
LETMD1-225ENST00000550715 PTPN23Q9H3S7 1636 aa11.69□□□□□ -0.54
LETMD1-225ENST00000550715 HSPA6P17066 643 aa11.69□□□□□ -0.54
LETMD1-225ENST00000550715 BLOC1S3Q6QNY0 202 aa11.69□□□□□ -0.54
LETMD1-225ENST00000550715 RNF19BQ6ZMZ0 732 aa11.69□□□□□ -0.54
LETMD1-225ENST00000550715 HELBQ8NG08 1087 aaPredicted RBP11.69□□□□□ -0.54
LETMD1-225ENST00000550715 PRR7Q8TB68 274 aa11.69□□□□□ -0.54
LETMD1-225ENST00000550715 C1orf115Q9H7X2 142 aa11.69□□□□□ -0.54
LETMD1-225ENST00000550715 PCDHB3Q9Y5E6 796 aa11.69□□□□□ -0.54
LETMD1-225ENST00000550715 TRAK2O60296 914 aa11.68□□□□□ -0.54
LETMD1-225ENST00000550715 ZNF326Q5BKZ1 582 aaKnown RBP11.68□□□□□ -0.54
LETMD1-225ENST00000550715 KANK4Q5T7N3 995 aaPredicted RBP11.68□□□□□ -0.54
LETMD1-225ENST00000550715 COL13A1Q5TAT6 717 aaPredicted RBP11.68□□□□□ -0.54
LETMD1-225ENST00000550715 POTEGQ6S5H5 508 aa11.68□□□□□ -0.54
LETMD1-225ENST00000550715 THSD4Q6ZMP0 1018 aa11.68□□□□□ -0.54
LETMD1-225ENST00000550715 GDPD2Q9HCC8 539 aa11.68□□□□□ -0.54
LETMD1-225ENST00000550715 HMX1Q9NP08 348 aaPredicted RBP11.68□□□□□ -0.54
LETMD1-225ENST00000550715 ANKRD30AQ9BXX3 1397 aa11.67□□□□□ -0.54
LETMD1-225ENST00000550715 CDAN1Q8IWY9 1227 aa11.67□□□□□ -0.54
LETMD1-225ENST00000550715 LRRN4Q8WUT4 740 aa11.67□□□□□ -0.54
LETMD1-225ENST00000550715 ADGRB2O60241 1585 aa11.67□□□□□ -0.54
LETMD1-225ENST00000550715 GPR162Q16538 588 aa11.66□□□□□ -0.54
LETMD1-225ENST00000550715 Q3C1V9 767 aa11.66□□□□□ -0.54
LETMD1-225ENST00000550715 RETREG3Q86VR2 466 aa11.66□□□□□ -0.54
LETMD1-225ENST00000550715 TBC1D2BQ9UPU7 963 aa11.66□□□□□ -0.54
LETMD1-225ENST00000550715 MYOM1P52179 1685 aa11.65□□□□□ -0.54
LETMD1-225ENST00000550715 POTEMA6NI47 508 aa11.65□□□□□ -0.54
LETMD1-225ENST00000550715 APBB1O00213 710 aa11.65□□□□□ -0.54
LETMD1-225ENST00000550715 ARID3AQ99856 593 aa11.65□□□□□ -0.54
LETMD1-225ENST00000550715 DAPK1P53355 1430 aa11.65□□□□□ -0.54
LETMD1-225ENST00000550715 ABL2P42684 1182 aa11.64□□□□□ -0.55
LETMD1-225ENST00000550715 THSD7AQ9UPZ6 1657 aa11.63□□□□□ -0.55
LETMD1-225ENST00000550715 PRELPP51888 382 aa11.63□□□□□ -0.55
LETMD1-225ENST00000550715 COPS2P61201 443 aa11.63□□□□□ -0.55
LETMD1-225ENST00000550715 PER1O15534 1290 aaPredicted RBP11.62□□□□□ -0.55
LETMD1-225ENST00000550715 NR1I2O75469 434 aa11.62□□□□□ -0.55
LETMD1-225ENST00000550715 SCUBE3Q8IX30 993 aa11.62□□□□□ -0.55
LETMD1-225ENST00000550715 NRAPQ86VF7 1730 aa11.62□□□□□ -0.55
LETMD1-225ENST00000550715 SHANK3Q9BYB0 1731 aa11.62□□□□□ -0.55
LETMD1-225ENST00000550715 CROCC2H7BZ55 1655 aa11.62□□□□□ -0.55
LETMD1-225ENST00000550715 CASZ1Q86V15 1759 aa11.62□□□□□ -0.55
LETMD1-225ENST00000550715 PSME1Q06323 249 aa11.61□□□□□ -0.55
LETMD1-225ENST00000550715 PDE3BQ13370 1112 aa11.61□□□□□ -0.55
LETMD1-225ENST00000550715 WAPLQ7Z5K2 1190 aa11.61□□□□□ -0.55
LETMD1-225ENST00000550715 DNAJC5GQ8N7S2 189 aa11.61□□□□□ -0.55
LETMD1-225ENST00000550715 GOLGB1Q14789 3259 aaKnown RBP11.61□□□□□ -0.55
LETMD1-225ENST00000550715 SPATA31A1Q5TZJ5 1347 aa11.6□□□□□ -0.55
LETMD1-225ENST00000550715 HFM1A2PYH4 1435 aa11.6□□□□□ -0.55
LETMD1-225ENST00000550715 TNS3Q68CZ2 1445 aa11.6□□□□□ -0.55
LETMD1-225ENST00000550715 E9PCH4 1651 aa11.6□□□□□ -0.55
LETMD1-225ENST00000550715 PTPN5P54829 565 aa11.6□□□□□ -0.55
LETMD1-225ENST00000550715 BRICD5Q6PL45 260 aa11.6□□□□□ -0.55
LETMD1-225ENST00000550715 EPS8L1Q8TE68 723 aa11.6□□□□□ -0.55
LETMD1-225ENST00000550715 USB1Q9BQ65 265 aaKnown RBP11.6□□□□□ -0.55
LETMD1-225ENST00000550715 TRIM34Q9BYJ4 488 aa11.6□□□□□ -0.55
LETMD1-225ENST00000550715 NDUFB9Q9Y6M9 179 aa11.6□□□□□ -0.55
LETMD1-225ENST00000550715 CCDC144AA2RUR9 1427 aa11.6□□□□□ -0.55
LETMD1-225ENST00000550715 FMNL1O95466 1100 aaPredicted RBP11.59□□□□□ -0.55
LETMD1-225ENST00000550715 THAP11Q96EK4 314 aa11.59□□□□□ -0.55
LETMD1-225ENST00000550715 ARXQ96QS3 562 aa11.59□□□□□ -0.55
LETMD1-225ENST00000550715 PRM3Q9NNZ6 103 aa11.59□□□□□ -0.55
LETMD1-225ENST00000550715 PLSCR1O15162 318 aa11.58□□□□□ -0.56
LETMD1-225ENST00000550715 PTF1AQ7RTS3 328 aa11.58□□□□□ -0.56
LETMD1-225ENST00000550715 TNS4Q8IZW8 715 aa11.58□□□□□ -0.56
LETMD1-225ENST00000550715 USP35Q9P2H5 1018 aa11.58□□□□□ -0.56
LETMD1-225ENST00000550715 NAIPQ13075 1403 aa11.58□□□□□ -0.56
LETMD1-225ENST00000550715 ANKRD50Q9ULJ7 1429 aa11.58□□□□□ -0.56
LETMD1-225ENST00000550715 DLC1Q96QB1 1528 aa11.57□□□□□ -0.56
LETMD1-225ENST00000550715 TLL1O43897 1013 aa11.57□□□□□ -0.56
LETMD1-225ENST00000550715 NR6A1Q15406 480 aa11.57□□□□□ -0.56
LETMD1-225ENST00000550715 MTFR1LQ9H019 292 aa11.57□□□□□ -0.56
LETMD1-225ENST00000550715 ZNF330Q9Y3S2 320 aaPredicted RBP11.57□□□□□ -0.56
LETMD1-225ENST00000550715 CDC42BPGQ6DT37 1551 aa11.57□□□□□ -0.56
LETMD1-225ENST00000550715 IQGAP3Q86VI3 1631 aa11.57□□□□□ -0.56
LETMD1-225ENST00000550715 STRN4Q9NRL3 753 aa11.56□□□□□ -0.56
LETMD1-225ENST00000550715 SBNO1A3KN83 1393 aa11.55□□□□□ -0.56
LETMD1-225ENST00000550715 ABCA3Q99758 1704 aa11.55□□□□□ -0.56
LETMD1-225ENST00000550715 PRAG1Q86YV5 1406 aa11.55□□□□□ -0.56
LETMD1-225ENST00000550715 GPR37L1O60883 481 aa11.55□□□□□ -0.56
LETMD1-225ENST00000550715 CCDC82Q8N4S0 544 aa11.55□□□□□ -0.56
LETMD1-225ENST00000550715 PCDH10Q9P2E7 1040 aa11.55□□□□□ -0.56
LETMD1-225ENST00000550715 SALL2Q9Y467 1007 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms