RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 DZIP3Q86Y13 1208 aaKnown RBP14.54□□□□□ -0.08
NR4A1-215ENST00000550557 NPHP4O75161 1426 aaPredicted RBP14.54□□□□□ -0.08
NR4A1-215ENST00000550557 GRM1Q13255 1194 aa14.54□□□□□ -0.08
NR4A1-215ENST00000550557 TMEM132AQ24JP5 1023 aa14.54□□□□□ -0.08
NR4A1-215ENST00000550557 SSH1Q8WYL5 1049 aa14.54□□□□□ -0.08
NR4A1-215ENST00000550557 ZMYM4Q5VZL5 1548 aa14.54□□□□□ -0.08
NR4A1-215ENST00000550557 HOXC9P31274 260 aa14.54□□□□□ -0.08
NR4A1-215ENST00000550557 WDR78Q5VTH9 848 aa14.54□□□□□ -0.08
NR4A1-215ENST00000550557 AEBP1Q8IUX7 1158 aa14.54□□□□□ -0.08
NR4A1-215ENST00000550557 NYXQ9GZU5 481 aa14.54□□□□□ -0.08
NR4A1-215ENST00000550557 TPM2P07951 284 aa14.53□□□□□ -0.08
NR4A1-215ENST00000550557 RXRBP28702 533 aa14.53□□□□□ -0.08
NR4A1-215ENST00000550557 ALDH1L2Q3SY69 923 aa14.53□□□□□ -0.08
NR4A1-215ENST00000550557 MAP3K19Q56UN5 1328 aa14.53□□□□□ -0.08
NR4A1-215ENST00000550557 UBAC1Q9BSL1 405 aa14.53□□□□□ -0.08
NR4A1-215ENST00000550557 POLKQ9UBT6 870 aa14.53□□□□□ -0.08
NR4A1-215ENST00000550557 MAP3K12Q12852 859 aa14.53□□□□□ -0.08
NR4A1-215ENST00000550557 OGFOD1Q8N543 542 aa14.53□□□□□ -0.08
NR4A1-215ENST00000550557 CTNNA3Q9UI47 895 aa14.53□□□□□ -0.08
NR4A1-215ENST00000550557 TSPOAP1O95153 1857 aa14.52□□□□□ -0.08
NR4A1-215ENST00000550557 PI4KAP2A4QPH2 592 aa14.52□□□□□ -0.08
NR4A1-215ENST00000550557 PI4KAP1Q8N8J0 262 aa14.52□□□□□ -0.08
NR4A1-215ENST00000550557 KIF1BPQ96EK5 621 aa14.52□□□□□ -0.08
NR4A1-215ENST00000550557 DDX49Q9Y6V7 483 aaKnown RBP14.52□□□□□ -0.08
NR4A1-215ENST00000550557 CFAP74Q9C0B2 1584 aa14.52□□□□□ -0.08
NR4A1-215ENST00000550557 ZNF335Q9H4Z2 1342 aaPredicted RBP14.52□□□□□ -0.08
NR4A1-215ENST00000550557 IQGAP3Q86VI3 1631 aa14.52□□□□□ -0.08
NR4A1-215ENST00000550557 MAP4K4O95819 1239 aaPredicted RBP14.52□□□□□ -0.08
NR4A1-215ENST00000550557 LDHCP07864 332 aa14.52□□□□□ -0.08
NR4A1-215ENST00000550557 ATP2B1P20020 1258 aa14.52□□□□□ -0.08
NR4A1-215ENST00000550557 ANKRD18AQ8IVF6 992 aa14.52□□□□□ -0.08
NR4A1-215ENST00000550557 PRM3Q9NNZ6 103 aa14.52□□□□□ -0.08
NR4A1-215ENST00000550557 EXOC6BQ9Y2D4 811 aa14.52□□□□□ -0.08
NR4A1-215ENST00000550557 IL16Q14005 1332 aa14.52□□□□□ -0.09
NR4A1-215ENST00000550557 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.52□□□□□ -0.09
NR4A1-215ENST00000550557 SOGA3Q5TF21 947 aa14.52□□□□□ -0.09
NR4A1-215ENST00000550557 PDE4CQ08493 712 aa14.52□□□□□ -0.09
NR4A1-215ENST00000550557 COPS6Q7L5N1 327 aa14.52□□□□□ -0.09
NR4A1-215ENST00000550557 TMEM57Q8N5G2 664 aa14.52□□□□□ -0.09
NR4A1-215ENST00000550557 XAGE3Q8WTP9 111 aa14.52□□□□□ -0.09
NR4A1-215ENST00000550557 EYA1Q99502 592 aa14.52□□□□□ -0.09
NR4A1-215ENST00000550557 PRDM15P57071 1507 aaPredicted RBP14.51□□□□□ -0.09
NR4A1-215ENST00000550557 NUP133Q8WUM0 1156 aa14.51□□□□□ -0.09
NR4A1-215ENST00000550557 ERCC6L2Q5T890 1561 aa14.51□□□□□ -0.09
NR4A1-215ENST00000550557 WWC2Q6AWC2 1192 aa14.51□□□□□ -0.09
NR4A1-215ENST00000550557 MKNK2Q9HBH9 465 aa14.51□□□□□ -0.09
NR4A1-215ENST00000550557 PTPRTO14522 1441 aa14.51□□□□□ -0.09
NR4A1-215ENST00000550557 HDAC9Q9UKV0 1011 aa14.51□□□□□ -0.09
NR4A1-215ENST00000550557 FAM43AQ8N2R8 423 aa14.5□□□□□ -0.09
NR4A1-215ENST00000550557 HOOK1Q9UJC3 728 aaKnown RBP14.5□□□□□ -0.09
NR4A1-215ENST00000550557 CCDC69A6NI79 296 aa14.5□□□□□ -0.09
NR4A1-215ENST00000550557 UTP14AQ9BVJ6 771 aaKnown RBP14.5□□□□□ -0.09
NR4A1-215ENST00000550557 UNC13BO14795 1591 aa14.5□□□□□ -0.09
NR4A1-215ENST00000550557 PRIM1P49642 420 aaKnown RBP14.5□□□□□ -0.09
NR4A1-215ENST00000550557 TRIM22Q8IYM9 498 aa14.5□□□□□ -0.09
NR4A1-215ENST00000550557 SBNO2Q9Y2G9 1366 aa14.5□□□□□ -0.09
NR4A1-215ENST00000550557 HSP90AA2PQ14568 343 aaPredicted RBP14.49□□□□□ -0.09
NR4A1-215ENST00000550557 ZC3H12CQ9C0D7 883 aaKnown RBP14.49□□□□□ -0.09
NR4A1-215ENST00000550557 BICD2Q8TD16 824 aa14.49□□□□□ -0.09
NR4A1-215ENST00000550557 MRE11P49959 708 aa14.49□□□□□ -0.09
NR4A1-215ENST00000550557 TSR1Q2NL82 804 aaKnown RBP14.49□□□□□ -0.09
NR4A1-215ENST00000550557 PIK3R4Q99570 1358 aa14.48□□□□□ -0.09
NR4A1-215ENST00000550557 MINDY4BA8MYZ0 360 aa14.48□□□□□ -0.09
NR4A1-215ENST00000550557 MTHFSDQ2M296 383 aaKnown RBP14.48□□□□□ -0.09
NR4A1-215ENST00000550557 KRI1Q8N9T8 703 aaKnown RBP14.48□□□□□ -0.09
NR4A1-215ENST00000550557 PIP4K2AP48426 406 aaPredicted RBP14.48□□□□□ -0.09
NR4A1-215ENST00000550557 FEZ1Q99689 392 aa14.48□□□□□ -0.09
NR4A1-215ENST00000550557 ARAP3Q8WWN8 1544 aa14.48□□□□□ -0.09
NR4A1-215ENST00000550557 TRAK2O60296 914 aa14.48□□□□□ -0.09
NR4A1-215ENST00000550557 NUTM1Q86Y26 1132 aa14.48□□□□□ -0.09
NR4A1-215ENST00000550557 MBIPQ9NS73 344 aa14.48□□□□□ -0.09
NR4A1-215ENST00000550557 BCORL1Q5H9F3 1711 aa14.48□□□□□ -0.09
NR4A1-215ENST00000550557 KDM5AP29375 1690 aaKnown RBP14.48□□□□□ -0.09
NR4A1-215ENST00000550557 TRIM27P14373 513 aa14.48□□□□□ -0.09
NR4A1-215ENST00000550557 CHD1LQ86WJ1 897 aa14.48□□□□□ -0.09
NR4A1-215ENST00000550557 JARID2Q92833 1246 aaPredicted RBP14.48□□□□□ -0.09
NR4A1-215ENST00000550557 LRRFIP2Q9Y608 721 aaKnown RBP14.48□□□□□ -0.09
NR4A1-215ENST00000550557 CDC42BPBQ9Y5S2 1711 aa14.47□□□□□ -0.09
NR4A1-215ENST00000550557 CHPF2Q9P2E5 772 aa14.47□□□□□ -0.09
NR4A1-215ENST00000550557 BECN2A8MW95 431 aa14.47□□□□□ -0.09
NR4A1-215ENST00000550557 RAB11FIP3O75154 756 aa14.47□□□□□ -0.09
NR4A1-215ENST00000550557 SPTY2D1Q68D10 685 aaPredicted RBP14.47□□□□□ -0.09
NR4A1-215ENST00000550557 MYOM2P54296 1465 aa14.47□□□□□ -0.09
NR4A1-215ENST00000550557 NF2P35240 595 aa14.47□□□□□ -0.09
NR4A1-215ENST00000550557 NSFL1CQ9UNZ2 370 aaKnown RBP14.47□□□□□ -0.09
NR4A1-215ENST00000550557 BAG3O95817 575 aa14.47□□□□□ -0.09
NR4A1-215ENST00000550557 LMOD1P29536 600 aaPredicted RBP14.47□□□□□ -0.09
NR4A1-215ENST00000550557 A0A1W2PP64 1363 aa14.46□□□□□ -0.09
NR4A1-215ENST00000550557 PTPRCP08575 1304 aa14.46□□□□□ -0.09
NR4A1-215ENST00000550557 ANKRD20A12PQ8NF67 263 aa14.46□□□□□ -0.09
NR4A1-215ENST00000550557 CDK5RAP3Q96JB5 506 aa14.46□□□□□ -0.09
NR4A1-215ENST00000550557 IGHDP01880 384 aa14.46□□□□□ -0.09
NR4A1-215ENST00000550557 CNBD1Q8NA66 436 aa14.46□□□□□ -0.09
NR4A1-215ENST00000550557 BOLA2Q9H3K6 86 aa14.46□□□□□ -0.1
NR4A1-215ENST00000550557 GLRX3O76003 335 aaKnown RBP14.45□□□□□ -0.1
NR4A1-215ENST00000550557 PCMTD1Q96MG8 357 aaPredicted RBP14.45□□□□□ -0.1
NR4A1-215ENST00000550557 NAPBQ9H115 298 aa14.45□□□□□ -0.1
NR4A1-215ENST00000550557 SYNMO15061 1565 aa14.45□□□□□ -0.1
NR4A1-215ENST00000550557 ZNF444Q8N0Y2 327 aaPredicted RBP14.45□□□□□ -0.1
NR4A1-215ENST00000550557 CCDC8Q9H0W5 538 aaPredicted RBP14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms