RNA–Protein interactions for RNA: ENST00000549526.1

SMARCD1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 401 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-207ENST00000549526 C21orf2O43822 256 aa11.81□□□□□ -0.52
SMARCD1-207ENST00000549526 AOC2O75106 756 aa11.81□□□□□ -0.52
SMARCD1-207ENST00000549526 TM4SF1P30408 202 aa11.81□□□□□ -0.52
SMARCD1-207ENST00000549526 MAP2K2P36507 400 aa11.81□□□□□ -0.52
SMARCD1-207ENST00000549526 HABP4Q5JVS0 413 aaKnown RBP11.81□□□□□ -0.52
SMARCD1-207ENST00000549526 C2CD5Q86YS7 1000 aa11.81□□□□□ -0.52
SMARCD1-207ENST00000549526 DLEC1Q9Y238 1755 aa11.81□□□□□ -0.52
SMARCD1-207ENST00000549526 CNTNAP4Q9C0A0 1308 aa11.81□□□□□ -0.52
SMARCD1-207ENST00000549526 EDC4Q6P2E9 1401 aaKnown RBP11.8□□□□□ -0.52
SMARCD1-207ENST00000549526 MYH14Q7Z406 1995 aaKnown RBP11.8□□□□□ -0.52
SMARCD1-207ENST00000549526 THSD7BQ9C0I4 1608 aa11.8□□□□□ -0.52
SMARCD1-207ENST00000549526 NBPF15Q8N660 670 aa11.8□□□□□ -0.52
SMARCD1-207ENST00000549526 COG3Q96JB2 828 aa11.8□□□□□ -0.52
SMARCD1-207ENST00000549526 SLC4A9Q96Q91 983 aa11.8□□□□□ -0.52
SMARCD1-207ENST00000549526 SPG7Q9UQ90 795 aa11.8□□□□□ -0.52
SMARCD1-207ENST00000549526 FER1L6Q2WGJ9 1857 aa11.8□□□□□ -0.52
SMARCD1-207ENST00000549526 USP42Q9H9J4 1324 aaKnown RBP11.8□□□□□ -0.52
SMARCD1-207ENST00000549526 LTBP1Q14766 1721 aa11.8□□□□□ -0.52
SMARCD1-207ENST00000549526 DLL1O00548 723 aa11.79□□□□□ -0.52
SMARCD1-207ENST00000549526 PNMA8AQ86V59 439 aaPredicted RBP11.79□□□□□ -0.52
SMARCD1-207ENST00000549526 L3MBTL3Q96JM7 780 aaPredicted RBP11.79□□□□□ -0.52
SMARCD1-207ENST00000549526 SLC12A5Q9H2X9 1139 aa11.79□□□□□ -0.52
SMARCD1-207ENST00000549526 DDX21Q9NR30 783 aaKnown RBP eCLIP11.79□□□□□ -0.52
SMARCD1-207ENST00000549526 HACL1Q9UJ83 578 aa11.79□□□□□ -0.52
SMARCD1-207ENST00000549526 COL5A3P25940 1745 aaPredicted RBP11.79□□□□□ -0.52
SMARCD1-207ENST00000549526 AFDNP55196 1824 aaKnown RBP11.79□□□□□ -0.52
SMARCD1-207ENST00000549526 ZPR1O75312 459 aa11.78□□□□□ -0.52
SMARCD1-207ENST00000549526 EPHX2P34913 555 aa11.78□□□□□ -0.52
SMARCD1-207ENST00000549526 RRS1Q15050 365 aaKnown RBP11.78□□□□□ -0.52
SMARCD1-207ENST00000549526 ZNF622Q969S3 477 aaKnown RBP eCLIP11.78□□□□□ -0.52
SMARCD1-207ENST00000549526 TAOK3Q9H2K8 898 aa11.78□□□□□ -0.52
SMARCD1-207ENST00000549526 TERF2IPQ9NYB0 399 aa11.78□□□□□ -0.52
SMARCD1-207ENST00000549526 KDRP35968 1356 aa11.77□□□□□ -0.53
SMARCD1-207ENST00000549526 ZNF831Q5JPB2 1677 aa11.76□□□□□ -0.53
SMARCD1-207ENST00000549526 CRKLP46109 303 aaKnown RBP11.76□□□□□ -0.53
SMARCD1-207ENST00000549526 USPL1Q5W0Q7 1092 aa11.76□□□□□ -0.53
SMARCD1-207ENST00000549526 ADAMTSL1Q8N6G6 1762 aa11.75□□□□□ -0.53
SMARCD1-207ENST00000549526 SERPINB2P05120 415 aa11.75□□□□□ -0.53
SMARCD1-207ENST00000549526 FMR1Q06787 632 aaKnown RBP eCLIP11.75□□□□□ -0.53
SMARCD1-207ENST00000549526 HSP90AB2PQ58FF8 381 aa11.75□□□□□ -0.53
SMARCD1-207ENST00000549526 LTBP3Q9NS15 1303 aa11.75□□□□□ -0.53
SMARCD1-207ENST00000549526 RTL1A6NKG5 1358 aa11.75□□□□□ -0.53
SMARCD1-207ENST00000549526 TRPM7Q96QT4 1865 aa11.74□□□□□ -0.53
SMARCD1-207ENST00000549526 BRPF1P55201 1214 aaPredicted RBP11.74□□□□□ -0.53
SMARCD1-207ENST00000549526 NFIXQ14938 502 aa11.74□□□□□ -0.53
SMARCD1-207ENST00000549526 IFNL2Q8IZJ0 200 aa11.74□□□□□ -0.53
SMARCD1-207ENST00000549526 TLL2Q9Y6L7 1015 aa11.74□□□□□ -0.53
SMARCD1-207ENST00000549526 RAB3GAP2Q9H2M9 1393 aa11.74□□□□□ -0.53
SMARCD1-207ENST00000549526 A0A1W2PP64 1363 aa11.73□□□□□ -0.53
SMARCD1-207ENST00000549526 PTCD1O75127 700 aaKnown RBP11.73□□□□□ -0.53
SMARCD1-207ENST00000549526 CST9Q5W186 159 aa11.73□□□□□ -0.53
SMARCD1-207ENST00000549526 CIAPIN1Q6FI81 312 aa11.73□□□□□ -0.53
SMARCD1-207ENST00000549526 RNF123Q5XPI4 1314 aa11.72□□□□□ -0.53
SMARCD1-207ENST00000549526 PHKG2P15735 406 aa11.72□□□□□ -0.53
SMARCD1-207ENST00000549526 INSRP06213 1382 aa11.71□□□□□ -0.53
SMARCD1-207ENST00000549526 FXR1P51114 621 aaKnown RBP eCLIP11.71□□□□□ -0.53
SMARCD1-207ENST00000549526 CACNA1SQ13698 1873 aa11.71□□□□□ -0.53
SMARCD1-207ENST00000549526 NRXN2Q9P2S2 1712 aa11.71□□□□□ -0.54
SMARCD1-207ENST00000549526 ZNF541Q9H0D2 1346 aa11.7□□□□□ -0.54
SMARCD1-207ENST00000549526 TRAF5O00463 557 aa11.7□□□□□ -0.54
SMARCD1-207ENST00000549526 PDE6BP35913 854 aa11.7□□□□□ -0.54
SMARCD1-207ENST00000549526 BICDL1Q6ZP65 573 aa11.7□□□□□ -0.54
SMARCD1-207ENST00000549526 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.7□□□□□ -0.54
SMARCD1-207ENST00000549526 ERVV-2B6SEH9 535 aa11.69□□□□□ -0.54
SMARCD1-207ENST00000549526 SOGA3Q5TF21 947 aa11.69□□□□□ -0.54
SMARCD1-207ENST00000549526 SAPCD2Q86UD0 394 aa11.69□□□□□ -0.54
SMARCD1-207ENST00000549526 SLC17A8Q8NDX2 589 aa11.69□□□□□ -0.54
SMARCD1-207ENST00000549526 PDZRN3Q9UPQ7 1066 aa11.69□□□□□ -0.54
SMARCD1-207ENST00000549526 SLX4Q8IY92 1834 aa11.69□□□□□ -0.54
SMARCD1-207ENST00000549526 CARMIL3Q8ND23 1372 aa11.68□□□□□ -0.54
SMARCD1-207ENST00000549526 INTS5Q6P9B9 1019 aaKnown RBP11.68□□□□□ -0.54
SMARCD1-207ENST00000549526 A0A0C4DFX4 3053 aa11.68□□□□□ -0.54
SMARCD1-207ENST00000549526 CABP4P57796 275 aa11.67□□□□□ -0.54
SMARCD1-207ENST00000549526 CNKSR1Q969H4 720 aa11.67□□□□□ -0.54
SMARCD1-207ENST00000549526 BRIP1Q9BX63 1249 aa11.67□□□□□ -0.54
SMARCD1-207ENST00000549526 NARFQ9UHQ1 456 aa11.67□□□□□ -0.54
SMARCD1-207ENST00000549526 ADAMTS7Q9UKP4 1686 aa11.67□□□□□ -0.54
SMARCD1-207ENST00000549526 ANKRD31Q8N7Z5 1873 aa11.67□□□□□ -0.54
SMARCD1-207ENST00000549526 LMOD1P29536 600 aaPredicted RBP11.66□□□□□ -0.54
SMARCD1-207ENST00000549526 PRPF40BQ6NWY9 871 aaKnown RBP11.66□□□□□ -0.54
SMARCD1-207ENST00000549526 GPC2Q8N158 579 aa11.66□□□□□ -0.54
SMARCD1-207ENST00000549526 CCDC24Q8N4L8 307 aa11.66□□□□□ -0.54
SMARCD1-207ENST00000549526 HHIPL1Q96JK4 782 aa11.66□□□□□ -0.54
SMARCD1-207ENST00000549526 ZNF277Q9NRM2 450 aaPredicted RBP11.66□□□□□ -0.54
SMARCD1-207ENST00000549526 HPS5Q9UPZ3 1129 aa11.66□□□□□ -0.54
SMARCD1-207ENST00000549526 FLT4P35916 1363 aa11.66□□□□□ -0.54
SMARCD1-207ENST00000549526 CELF2O95319 508 aaKnown RBP11.65□□□□□ -0.54
SMARCD1-207ENST00000549526 NOGQ13253 232 aa11.65□□□□□ -0.54
SMARCD1-207ENST00000549526 CTU1Q7Z7A3 348 aaKnown RBP11.65□□□□□ -0.54
SMARCD1-207ENST00000549526 ZIC5Q96T25 663 aa11.65□□□□□ -0.54
SMARCD1-207ENST00000549526 GGNBP2Q9H3C7 697 aa11.65□□□□□ -0.54
SMARCD1-207ENST00000549526 GJA3Q9Y6H8 435 aa11.65□□□□□ -0.54
SMARCD1-207ENST00000549526 ROCK2O75116 1388 aaKnown RBP11.65□□□□□ -0.55
SMARCD1-207ENST00000549526 AKAP4Q5JQC9 854 aa11.64□□□□□ -0.55
SMARCD1-207ENST00000549526 BCL2L12Q9HB09 334 aa11.64□□□□□ -0.55
SMARCD1-207ENST00000549526 COL11A2P13942 1736 aaPredicted RBP11.63□□□□□ -0.55
SMARCD1-207ENST00000549526 SOS1Q07889 1333 aaPredicted RBP11.63□□□□□ -0.55
SMARCD1-207ENST00000549526 FZD9O00144 591 aa11.63□□□□□ -0.55
SMARCD1-207ENST00000549526 PPM1GO15355 546 aaPredicted RBP11.63□□□□□ -0.55
SMARCD1-207ENST00000549526 TRPA1O75762 1119 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms