RNA–Protein interactions for RNA: ENST00000546812.1

SSH1-205, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-205ENST00000546812 ZNF530Q6P9A1 599 aaPredicted RBP12.8□□□□□ -0.36
SSH1-205ENST00000546812 NFATC2IPQ8NCF5 419 aa12.8□□□□□ -0.36
SSH1-205ENST00000546812 MYH14Q7Z406 1995 aaKnown RBP12.8□□□□□ -0.36
SSH1-205ENST00000546812 CTCFP49711 727 aaPredicted RBP12.79□□□□□ -0.36
SSH1-205ENST00000546812 C2CD5Q86YS7 1000 aa12.79□□□□□ -0.36
SSH1-205ENST00000546812 CNTNAP1P78357 1384 aa12.79□□□□□ -0.36
SSH1-205ENST00000546812 COL5A3P25940 1745 aaPredicted RBP12.79□□□□□ -0.36
SSH1-205ENST00000546812 H0YIN7 160 aa12.78□□□□□ -0.36
SSH1-205ENST00000546812 SERPINB2P05120 415 aa12.78□□□□□ -0.36
SSH1-205ENST00000546812 AIDAQ96BJ3 306 aa12.78□□□□□ -0.36
SSH1-205ENST00000546812 NARFQ9UHQ1 456 aa12.78□□□□□ -0.36
SSH1-205ENST00000546812 ERFEQ4G0M1 354 aa12.77□□□□□ -0.37
SSH1-205ENST00000546812 C1orf141Q5JVX7 400 aa12.77□□□□□ -0.37
SSH1-205ENST00000546812 SOS1Q07889 1333 aaPredicted RBP12.77□□□□□ -0.37
SSH1-205ENST00000546812 POTEIP0CG38 1075 aa12.76□□□□□ -0.37
SSH1-205ENST00000546812 POTEJP0CG39 1038 aa12.76□□□□□ -0.37
SSH1-205ENST00000546812 DNAJC10Q8IXB1 793 aa12.76□□□□□ -0.37
SSH1-205ENST00000546812 WBP1LQ9NX94 342 aa12.76□□□□□ -0.37
SSH1-205ENST00000546812 KIF20BQ96Q89 1820 aa12.76□□□□□ -0.37
SSH1-205ENST00000546812 CYP19A1P11511 503 aaPredicted RBP12.75□□□□□ -0.37
SSH1-205ENST00000546812 TNNT2P45379 298 aaPredicted RBP12.75□□□□□ -0.37
SSH1-205ENST00000546812 VEGFBP49765 207 aa12.75□□□□□ -0.37
SSH1-205ENST00000546812 PASKQ96RG2 1323 aa12.75□□□□□ -0.37
SSH1-205ENST00000546812 BCL2L12Q9HB09 334 aa12.75□□□□□ -0.37
SSH1-205ENST00000546812 PCDH10Q9P2E7 1040 aa12.75□□□□□ -0.37
SSH1-205ENST00000546812 C21orf2O43822 256 aa12.74□□□□□ -0.37
SSH1-205ENST00000546812 DDNO94850 711 aaPredicted RBP12.74□□□□□ -0.37
SSH1-205ENST00000546812 LBX1P52954 281 aa12.74□□□□□ -0.37
SSH1-205ENST00000546812 FAM161AQ3B820 660 aa12.74□□□□□ -0.37
SSH1-205ENST00000546812 ABHD8Q96I13 439 aa12.74□□□□□ -0.37
SSH1-205ENST00000546812 PDZRN3Q9UPQ7 1066 aa12.74□□□□□ -0.37
SSH1-205ENST00000546812 ANKRD26Q9UPS8 1709 aa12.74□□□□□ -0.37
SSH1-205ENST00000546812 IQCA1LA6NCM1 817 aa12.73□□□□□ -0.37
SSH1-205ENST00000546812 TMEM88BA6NKF7 163 aa12.73□□□□□ -0.37
SSH1-205ENST00000546812 LDHDQ86WU2 507 aa12.73□□□□□ -0.37
SSH1-205ENST00000546812 ZNF622Q969S3 477 aaKnown RBP eCLIP12.73□□□□□ -0.37
SSH1-205ENST00000546812 COL15A1P39059 1388 aa12.72□□□□□ -0.37
SSH1-205ENST00000546812 LTBP3Q9NS15 1303 aa12.72□□□□□ -0.37
SSH1-205ENST00000546812 AEBP1Q8IUX7 1158 aa12.72□□□□□ -0.37
SSH1-205ENST00000546812 BRIP1Q9BX63 1249 aa12.72□□□□□ -0.37
SSH1-205ENST00000546812 TAOK3Q9H2K8 898 aa12.72□□□□□ -0.37
SSH1-205ENST00000546812 ZNF219Q9P2Y4 722 aaPredicted RBP12.72□□□□□ -0.37
SSH1-205ENST00000546812 ZBTB1Q9Y2K1 713 aa12.72□□□□□ -0.37
SSH1-205ENST00000546812 CARMIL3Q8ND23 1372 aa12.71□□□□□ -0.37
SSH1-205ENST00000546812 ADAMTS7Q9UKP4 1686 aa12.71□□□□□ -0.37
SSH1-205ENST00000546812 ITGBL1O95965 494 aaPredicted RBP12.71□□□□□ -0.37
SSH1-205ENST00000546812 PDE6BP35913 854 aa12.71□□□□□ -0.37
SSH1-205ENST00000546812 L3MBTL3Q96JM7 780 aaPredicted RBP12.71□□□□□ -0.37
SSH1-205ENST00000546812 TAF1DQ9H5J8 278 aaPredicted RBP12.71□□□□□ -0.37
SSH1-205ENST00000546812 SLC52A2Q9HAB3 445 aa12.71□□□□□ -0.37
SSH1-205ENST00000546812 HSPA8P11142 646 aaKnown RBP12.7□□□□□ -0.38
SSH1-205ENST00000546812 BICDL1Q6ZP65 573 aa12.7□□□□□ -0.38
SSH1-205ENST00000546812 CCER1Q8TC90 406 aaPredicted RBP12.7□□□□□ -0.38
SSH1-205ENST00000546812 TJP1Q07157 1748 aa12.69□□□□□ -0.38
SSH1-205ENST00000546812 MAP2K1Q02750 393 aaPredicted RBP12.69□□□□□ -0.38
SSH1-205ENST00000546812 MLLT1Q03111 559 aaPredicted RBP12.69□□□□□ -0.38
SSH1-205ENST00000546812 SLC39A6Q13433 755 aa12.69□□□□□ -0.38
SSH1-205ENST00000546812 AKAP4Q5JQC9 854 aa12.69□□□□□ -0.38
SSH1-205ENST00000546812 SULT6B1Q6IMI4 303 aa12.69□□□□□ -0.38
SSH1-205ENST00000546812 TIAM2Q8IVF5 1701 aa12.68□□□□□ -0.38
SSH1-205ENST00000546812 NRXN2Q9P2S2 1712 aa12.68□□□□□ -0.38
SSH1-205ENST00000546812 RASSF10A6NK89 507 aa12.68□□□□□ -0.38
SSH1-205ENST00000546812 CANXP27824 592 aaKnown RBP12.68□□□□□ -0.38
SSH1-205ENST00000546812 RGS19P49795 217 aa12.68□□□□□ -0.38
SSH1-205ENST00000546812 EIF5P55010 431 aaKnown RBP12.68□□□□□ -0.38
SSH1-205ENST00000546812 DEFB115Q30KQ5 88 aa12.68□□□□□ -0.38
SSH1-205ENST00000546812 SOGA3Q5TF21 947 aa12.68□□□□□ -0.38
SSH1-205ENST00000546812 VSIG10Q8N0Z9 540 aa12.68□□□□□ -0.38
SSH1-205ENST00000546812 CNKSR1Q969H4 720 aa12.68□□□□□ -0.38
SSH1-205ENST00000546812 LGR6Q9HBX8 967 aa12.68□□□□□ -0.38
SSH1-205ENST00000546812 A0A087WZG4 1122 aa12.67□□□□□ -0.38
SSH1-205ENST00000546812 TBC1D9BQ66K14 1250 aa12.67□□□□□ -0.38
SSH1-205ENST00000546812 PRR5LQ6MZQ0 368 aa12.67□□□□□ -0.38
SSH1-205ENST00000546812 WDR33Q9C0J8 1336 aaKnown RBP12.66□□□□□ -0.38
SSH1-205ENST00000546812 CCDC85CA6NKD9 419 aa12.66□□□□□ -0.38
SSH1-205ENST00000546812 EAPPQ56P03 285 aaPredicted RBP12.66□□□□□ -0.38
SSH1-205ENST00000546812 STYK1Q6J9G0 422 aa12.66□□□□□ -0.38
SSH1-205ENST00000546812 CCDC24Q8N4L8 307 aa12.66□□□□□ -0.38
SSH1-205ENST00000546812 AFDNP55196 1824 aaKnown RBP12.66□□□□□ -0.38
SSH1-205ENST00000546812 DLEC1Q9Y238 1755 aa12.66□□□□□ -0.38
SSH1-205ENST00000546812 RNMTO43148 476 aaKnown RBP12.65□□□□□ -0.38
SSH1-205ENST00000546812 STARD3NLO95772 234 aa12.65□□□□□ -0.38
SSH1-205ENST00000546812 SRGNP10124 158 aa12.65□□□□□ -0.38
SSH1-205ENST00000546812 PRPF40BQ6NWY9 871 aaKnown RBP12.65□□□□□ -0.38
SSH1-205ENST00000546812 CNTROBQ8N137 903 aa12.65□□□□□ -0.38
SSH1-205ENST00000546812 HACL1Q9UJ83 578 aa12.65□□□□□ -0.38
SSH1-205ENST00000546812 CLEC11AQ9Y240 323 aa12.65□□□□□ -0.38
SSH1-205ENST00000546812 CLSPNQ9HAW4 1339 aa12.64□□□□□ -0.39
SSH1-205ENST00000546812 EPHX2P34913 555 aa12.64□□□□□ -0.39
SSH1-205ENST00000546812 PNMA8AQ86V59 439 aaPredicted RBP12.64□□□□□ -0.39
SSH1-205ENST00000546812 C7orf43Q8WVR3 580 aa12.64□□□□□ -0.39
SSH1-205ENST00000546812 MASTLQ96GX5 879 aa12.64□□□□□ -0.39
SSH1-205ENST00000546812 CCDC88AQ3V6T2 1871 aa12.63□□□□□ -0.39
SSH1-205ENST00000546812 IL13P35225 146 aa12.63□□□□□ -0.39
SSH1-205ENST00000546812 MAP1SQ66K74 1059 aaPredicted RBP12.63□□□□□ -0.39
SSH1-205ENST00000546812 CNBD1Q8NA66 436 aa12.63□□□□□ -0.39
SSH1-205ENST00000546812 ABT1Q9ULW3 272 aaKnown RBP12.63□□□□□ -0.39
SSH1-205ENST00000546812 TBC1D2BQ9UPU7 963 aa12.63□□□□□ -0.39
SSH1-205ENST00000546812 NPHP1O15259 732 aa12.62□□□□□ -0.39
SSH1-205ENST00000546812 CCDC93Q567U6 631 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms