RNA–Protein interactions for RNA: ENST00000546271.1

UBC-214, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-214ENST00000546271 PXDNLA1KZ92 1463 aa15.87■□□□□ 0.13
UBC-214ENST00000546271 GRIN3BO60391 1043 aa15.87■□□□□ 0.13
UBC-214ENST00000546271 GYS1P13807 737 aa15.87■□□□□ 0.13
UBC-214ENST00000546271 NLGN1Q8N2Q7 840 aa15.87■□□□□ 0.13
UBC-214ENST00000546271 DLG5Q8TDM6 1919 aa15.87■□□□□ 0.13
UBC-214ENST00000546271 KCNQ3O43525 872 aa15.86■□□□□ 0.13
UBC-214ENST00000546271 NFE2L2Q16236 605 aa15.86■□□□□ 0.13
UBC-214ENST00000546271 FMNL2Q96PY5 1086 aa15.86■□□□□ 0.13
UBC-214ENST00000546271 SRP68Q9UHB9 627 aaKnown RBP15.86■□□□□ 0.13
UBC-214ENST00000546271 AFDNP55196 1824 aaKnown RBP15.86■□□□□ 0.13
UBC-214ENST00000546271 SOS1Q07889 1333 aaPredicted RBP15.86■□□□□ 0.13
UBC-214ENST00000546271 MAPK8IP3Q9UPT6 1336 aa15.86■□□□□ 0.13
UBC-214ENST00000546271 ZBTB1Q9Y2K1 713 aa15.85■□□□□ 0.13
UBC-214ENST00000546271 PARP3Q9Y6F1 533 aa15.85■□□□□ 0.13
UBC-214ENST00000546271 USP42Q9H9J4 1324 aaKnown RBP15.85■□□□□ 0.13
UBC-214ENST00000546271 STARD3NLO95772 234 aa15.84■□□□□ 0.13
UBC-214ENST00000546271 TEX13AQ9BXU3 409 aaPredicted RBP15.84■□□□□ 0.13
UBC-214ENST00000546271 COL15A1P39059 1388 aa15.84■□□□□ 0.13
UBC-214ENST00000546271 ZNF316A6NFI3 1004 aaPredicted RBP15.83■□□□□ 0.12
UBC-214ENST00000546271 CANXP27824 592 aaKnown RBP15.83■□□□□ 0.12
UBC-214ENST00000546271 TAF7Q15545 349 aaPredicted RBP15.83■□□□□ 0.12
UBC-214ENST00000546271 LAMB4A4D0S4 1761 aa15.82■□□□□ 0.12
UBC-214ENST00000546271 BCORQ6W2J9 1755 aa15.82■□□□□ 0.12
UBC-214ENST00000546271 ARFGEF1Q9Y6D6 1849 aa15.82■□□□□ 0.12
UBC-214ENST00000546271 FKBP8Q14318 412 aa15.82■□□□□ 0.12
UBC-214ENST00000546271 UTRNP46939 3433 aa15.81■□□□□ 0.12
UBC-214ENST00000546271 GOLGB1Q14789 3259 aaKnown RBP15.81■□□□□ 0.12
UBC-214ENST00000546271 THUMPD2Q9BTF0 503 aaKnown RBP15.81■□□□□ 0.12
UBC-214ENST00000546271 DLEC1Q9Y238 1755 aa15.81■□□□□ 0.12
UBC-214ENST00000546271 NRXN2Q9P2S2 1712 aa15.8■□□□□ 0.12
UBC-214ENST00000546271 ATP10DQ9P241 1426 aa15.8■□□□□ 0.12
UBC-214ENST00000546271 ZPR1O75312 459 aa15.8■□□□□ 0.12
UBC-214ENST00000546271 EIF5P55010 431 aaKnown RBP15.8■□□□□ 0.12
UBC-214ENST00000546271 WDR43Q15061 677 aaKnown RBP eCLIP15.8■□□□□ 0.12
UBC-214ENST00000546271 USPL1Q5W0Q7 1092 aa15.8■□□□□ 0.12
UBC-214ENST00000546271 MIS18AQ9NYP9 233 aa15.8■□□□□ 0.12
UBC-214ENST00000546271 NARFQ9UHQ1 456 aa15.8■□□□□ 0.12
UBC-214ENST00000546271 A0A0G2JLW4 131 aa15.79■□□□□ 0.12
UBC-214ENST00000546271 PRAMEF22A3QJZ6 481 aa15.79■□□□□ 0.12
UBC-214ENST00000546271 A1BGP04217 495 aa15.79■□□□□ 0.12
UBC-214ENST00000546271 SNRPA1P09661 255 aaKnown RBP15.79■□□□□ 0.12
UBC-214ENST00000546271 TMPOP42166 694 aaKnown RBP15.79■□□□□ 0.12
UBC-214ENST00000546271 RIPK4P57078 832 aa15.79■□□□□ 0.12
UBC-214ENST00000546271 DDR1Q08345 913 aa15.79■□□□□ 0.12
UBC-214ENST00000546271 PNISRQ8TF01 805 aaKnown RBP15.79■□□□□ 0.12
UBC-214ENST00000546271 USP16Q9Y5T5 823 aa15.79■□□□□ 0.12
UBC-214ENST00000546271 KDM3BQ7LBC6 1761 aa15.79■□□□□ 0.12
UBC-214ENST00000546271 IL6STP40189 918 aaPredicted RBP15.78■□□□□ 0.12
UBC-214ENST00000546271 CCDC146Q8IYE0 955 aa15.78■□□□□ 0.12
UBC-214ENST00000546271 ADAMTS8Q9UP79 889 aa15.78■□□□□ 0.12
UBC-214ENST00000546271 BCS1LQ9Y276 419 aa15.78■□□□□ 0.12
UBC-214ENST00000546271 ZNF330Q9Y3S2 320 aaPredicted RBP15.78■□□□□ 0.12
UBC-214ENST00000546271 CACNA1SQ13698 1873 aa15.78■□□□□ 0.12
UBC-214ENST00000546271 A0A087WZG4 1122 aa15.77■□□□□ 0.12
UBC-214ENST00000546271 GIGYF1O75420 1035 aaPredicted RBP15.77■□□□□ 0.12
UBC-214ENST00000546271 DPEP1P16444 411 aa15.77■□□□□ 0.12
UBC-214ENST00000546271 TM4SF1P30408 202 aa15.77■□□□□ 0.12
UBC-214ENST00000546271 TGFB2P61812 414 aa15.77■□□□□ 0.12
UBC-214ENST00000546271 RUNDC1Q96C34 613 aa15.77■□□□□ 0.12
UBC-214ENST00000546271 BCL2L12Q9HB09 334 aa15.77■□□□□ 0.12
UBC-214ENST00000546271 ZNF526Q8TF50 670 aaPredicted RBP15.76■□□□□ 0.11
UBC-214ENST00000546271 RRP7AQ9Y3A4 280 aaKnown RBP15.76■□□□□ 0.11
UBC-214ENST00000546271 POLRMTO00411 1230 aaKnown RBP15.75■□□□□ 0.11
UBC-214ENST00000546271 LMOD3Q0VAK6 560 aa15.75■□□□□ 0.11
UBC-214ENST00000546271 NFIXQ14938 502 aa15.75■□□□□ 0.11
UBC-214ENST00000546271 ANKRD31Q8N7Z5 1873 aa15.75■□□□□ 0.11
UBC-214ENST00000546271 ADCY9O60503 1353 aa15.75■□□□□ 0.11
UBC-214ENST00000546271 COL11A2P13942 1736 aaPredicted RBP15.74■□□□□ 0.11
UBC-214ENST00000546271 PIP4K2AP48426 406 aaPredicted RBP15.74■□□□□ 0.11
UBC-214ENST00000546271 EIF4A1P60842 406 aaKnown RBP15.74■□□□□ 0.11
UBC-214ENST00000546271 NEUROD2Q15784 382 aa15.74■□□□□ 0.11
UBC-214ENST00000546271 TBC1D2BQ9UPU7 963 aa15.74■□□□□ 0.11
UBC-214ENST00000546271 BICDL1Q6ZP65 573 aa15.73■□□□□ 0.11
UBC-214ENST00000546271 NPM2Q86SE8 214 aaKnown RBP15.73■□□□□ 0.11
UBC-214ENST00000546271 NBPF26B4DH59 902 aa15.72■□□□□ 0.11
UBC-214ENST00000546271 CHRNA5P30532 468 aa15.72■□□□□ 0.11
UBC-214ENST00000546271 NBPF10Q6P3W6 841 aaKnown RBP15.72■□□□□ 0.11
UBC-214ENST00000546271 ARHGAP27Q6ZUM4 889 aa15.72■□□□□ 0.11
UBC-214ENST00000546271 NBPF15Q8N660 670 aa15.72■□□□□ 0.11
UBC-214ENST00000546271 TSPYL4Q9UJ04 414 aa15.72■□□□□ 0.11
UBC-214ENST00000546271 TRIM35Q9UPQ4 493 aa15.72■□□□□ 0.11
UBC-214ENST00000546271 TIAM2Q8IVF5 1701 aa15.71■□□□□ 0.11
UBC-214ENST00000546271 CAMTA2O94983 1202 aa15.71■□□□□ 0.11
UBC-214ENST00000546271 C1QTNF8P60827 252 aa15.71■□□□□ 0.11
UBC-214ENST00000546271 CCDC184Q52MB2 194 aa15.71■□□□□ 0.11
UBC-214ENST00000546271 TBC1D9BQ66K14 1250 aa15.71■□□□□ 0.11
UBC-214ENST00000546271 DZIP3Q86Y13 1208 aaKnown RBP15.71■□□□□ 0.11
UBC-214ENST00000546271 GPBP1L1Q9HC44 474 aaPredicted RBP15.71■□□□□ 0.11
UBC-214ENST00000546271 BABAM1Q9NWV8 329 aa15.71■□□□□ 0.11
UBC-214ENST00000546271 CARMIL3Q8ND23 1372 aa15.71■□□□□ 0.11
UBC-214ENST00000546271 SENP3-EIF4A1A0A087X0R7 540 aa15.7■□□□□ 0.1
UBC-214ENST00000546271 SERPINB2P05120 415 aa15.7■□□□□ 0.1
UBC-214ENST00000546271 PIM2Q9P1W9 311 aa15.7■□□□□ 0.1
UBC-214ENST00000546271 ANP32CO43423 234 aa15.69■□□□□ 0.1
UBC-214ENST00000546271 KCNA3P22001 575 aa15.69■□□□□ 0.1
UBC-214ENST00000546271 DALRD3Q5D0E6 543 aaKnown RBP15.69■□□□□ 0.1
UBC-214ENST00000546271 SBF1O95248 1867 aa15.68■□□□□ 0.1
UBC-214ENST00000546271 CCDC88AQ3V6T2 1871 aa15.68■□□□□ 0.1
UBC-214ENST00000546271 ARFGEF2Q9Y6D5 1785 aa15.68■□□□□ 0.1
UBC-214ENST00000546271 CHL1O00533 1208 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms