RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 EXOSC9Q06265 439 aaKnown RBP21.16■□□□□ 0.98
LIMS2-217ENST00000545738 ZNF827Q17R98 1081 aa21.16■□□□□ 0.98
LIMS2-217ENST00000545738 SMIM5Q71RC9 77 aa21.16■□□□□ 0.98
LIMS2-217ENST00000545738 CYP19A1P11511 503 aaPredicted RBP21.15■□□□□ 0.98
LIMS2-217ENST00000545738 SRCAPQ6ZRS2 3230 aa21.15■□□□□ 0.98
LIMS2-217ENST00000545738 SNRPA1P09661 255 aaKnown RBP21.15■□□□□ 0.98
LIMS2-217ENST00000545738 PIP4K2AP48426 406 aaPredicted RBP21.15■□□□□ 0.98
LIMS2-217ENST00000545738 MYH16Q9H6N6 1097 aa21.14■□□□□ 0.97
LIMS2-217ENST00000545738 UBR3Q6ZT12 1888 aa21.13■□□□□ 0.97
LIMS2-217ENST00000545738 INTS5Q6P9B9 1019 aaKnown RBP21.13■□□□□ 0.97
LIMS2-217ENST00000545738 CRKLP46109 303 aaKnown RBP21.12■□□□□ 0.97
LIMS2-217ENST00000545738 AKT1S1Q96B36 256 aa21.12■□□□□ 0.97
LIMS2-217ENST00000545738 A1BGP04217 495 aa21.12■□□□□ 0.97
LIMS2-217ENST00000545738 NECTIN2Q92692 538 aa21.12■□□□□ 0.97
LIMS2-217ENST00000545738 ZBTB1Q9Y2K1 713 aa21.12■□□□□ 0.97
LIMS2-217ENST00000545738 NBPF26B4DH59 902 aa21.1■□□□□ 0.97
LIMS2-217ENST00000545738 NBPF14Q5TI25 921 aa21.1■□□□□ 0.97
LIMS2-217ENST00000545738 NBPF10Q6P3W6 841 aaKnown RBP21.1■□□□□ 0.97
LIMS2-217ENST00000545738 NBPF15Q8N660 670 aa21.1■□□□□ 0.97
LIMS2-217ENST00000545738 CNTNAP4Q9C0A0 1308 aa21.1■□□□□ 0.97
LIMS2-217ENST00000545738 VAMP4O75379 141 aa21.09■□□□□ 0.97
LIMS2-217ENST00000545738 EIF2S2P20042 333 aaKnown RBP21.09■□□□□ 0.97
LIMS2-217ENST00000545738 PROSER3Q2NL68 480 aa21.09■□□□□ 0.97
LIMS2-217ENST00000545738 TWISTNBQ3B726 338 aaPredicted RBP21.09■□□□□ 0.97
LIMS2-217ENST00000545738 ANXA1P04083 346 aa21.09■□□□□ 0.97
LIMS2-217ENST00000545738 PDIA6Q15084 440 aa21.09■□□□□ 0.97
LIMS2-217ENST00000545738 TCERG1O14776 1098 aaKnown RBP21.07■□□□□ 0.96
LIMS2-217ENST00000545738 HOXB7P09629 217 aa21.07■□□□□ 0.96
LIMS2-217ENST00000545738 LRP10Q7Z4F1 713 aa21.07■□□□□ 0.96
LIMS2-217ENST00000545738 CCDC87Q9NVE4 849 aa21.07■□□□□ 0.96
LIMS2-217ENST00000545738 C4AP0C0L4 1744 aa21.07■□□□□ 0.96
LIMS2-217ENST00000545738 GNPATO15228 680 aa21.07■□□□□ 0.96
LIMS2-217ENST00000545738 TEX13AQ9BXU3 409 aaPredicted RBP21.07■□□□□ 0.96
LIMS2-217ENST00000545738 PDGFDQ9GZP0 370 aaPredicted RBP21.07■□□□□ 0.96
LIMS2-217ENST00000545738 STARD3NLO95772 234 aa21.06■□□□□ 0.96
LIMS2-217ENST00000545738 SLC15A2Q16348 729 aa21.06■□□□□ 0.96
LIMS2-217ENST00000545738 RC3H1Q5TC82 1133 aaKnown RBP21.06■□□□□ 0.96
LIMS2-217ENST00000545738 HDGFL1Q5TGJ6 251 aa21.06■□□□□ 0.96
LIMS2-217ENST00000545738 CANXP27824 592 aaKnown RBP21.05■□□□□ 0.96
LIMS2-217ENST00000545738 CHPF2Q9P2E5 772 aa21.05■□□□□ 0.96
LIMS2-217ENST00000545738 SOS1Q07889 1333 aaPredicted RBP21.05■□□□□ 0.96
LIMS2-217ENST00000545738 QSER1Q2KHR3 1735 aa21.04■□□□□ 0.96
LIMS2-217ENST00000545738 AK7Q96M32 723 aa21.04■□□□□ 0.96
LIMS2-217ENST00000545738 PNPLA7Q6ZV29 1317 aa21.04■□□□□ 0.96
LIMS2-217ENST00000545738 PHF14O94880 888 aa21.03■□□□□ 0.96
LIMS2-217ENST00000545738 RPS6KA4O75676 772 aa21.02■□□□□ 0.96
LIMS2-217ENST00000545738 MYL6BP14649 208 aa21.02■□□□□ 0.96
LIMS2-217ENST00000545738 EIF5P55010 431 aaKnown RBP21.02■□□□□ 0.96
LIMS2-217ENST00000545738 TFCP2L1Q9NZI6 479 aa21.02■□□□□ 0.96
LIMS2-217ENST00000545738 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.01■□□□□ 0.95
LIMS2-217ENST00000545738 COL15A1P39059 1388 aa21.01■□□□□ 0.95
LIMS2-217ENST00000545738 R3HDM1Q15032 1099 aaKnown RBP21.01■□□□□ 0.95
LIMS2-217ENST00000545738 STK32BQ9NY57 414 aa21.01■□□□□ 0.95
LIMS2-217ENST00000545738 CASZ1Q86V15 1759 aa21■□□□□ 0.95
LIMS2-217ENST00000545738 PSDA5PKW4 1024 aaPredicted RBP21■□□□□ 0.95
LIMS2-217ENST00000545738 COL23A1Q86Y22 540 aaPredicted RBP21■□□□□ 0.95
LIMS2-217ENST00000545738 ZNF330Q9Y3S2 320 aaPredicted RBP21■□□□□ 0.95
LIMS2-217ENST00000545738 IL6STP40189 918 aaPredicted RBP20.99■□□□□ 0.95
LIMS2-217ENST00000545738 ARHGEF1Q92888 912 aaKnown RBP20.99■□□□□ 0.95
LIMS2-217ENST00000545738 PHAXQ9H814 394 aaKnown RBP20.99■□□□□ 0.95
LIMS2-217ENST00000545738 DDX21Q9NR30 783 aaKnown RBP eCLIP20.99■□□□□ 0.95
LIMS2-217ENST00000545738 RTCBQ9Y3I0 505 aaKnown RBP20.99■□□□□ 0.95
LIMS2-217ENST00000545738 G2E3Q7L622 706 aa20.98■□□□□ 0.95
LIMS2-217ENST00000545738 BCL2L13Q9BXK5 485 aa20.98■□□□□ 0.95
LIMS2-217ENST00000545738 ERBB4Q15303 1308 aa20.98■□□□□ 0.95
LIMS2-217ENST00000545738 SSFA2P28290 1259 aa20.98■□□□□ 0.95
LIMS2-217ENST00000545738 CCDC30Q5VVM6 783 aa20.98■□□□□ 0.95
LIMS2-217ENST00000545738 TTLL7Q6ZT98 887 aa20.98■□□□□ 0.95
LIMS2-217ENST00000545738 SSH1Q8WYL5 1049 aa20.98■□□□□ 0.95
LIMS2-217ENST00000545738 DBF4Q9UBU7 674 aaPredicted RBP20.97■□□□□ 0.95
LIMS2-217ENST00000545738 SRP68Q9UHB9 627 aaKnown RBP20.97■□□□□ 0.95
LIMS2-217ENST00000545738 BCORQ6W2J9 1755 aa20.96■□□□□ 0.95
LIMS2-217ENST00000545738 SCN7AQ01118 1682 aa20.96■□□□□ 0.95
LIMS2-217ENST00000545738 SLC4A2P04920 1241 aa20.95■□□□□ 0.94
LIMS2-217ENST00000545738 TBC1D2BQ9UPU7 963 aa20.95■□□□□ 0.94
LIMS2-217ENST00000545738 CACNA1FO60840 1977 aa20.95■□□□□ 0.94
LIMS2-217ENST00000545738 RARSP54136 660 aaKnown RBP20.95■□□□□ 0.94
LIMS2-217ENST00000545738 XAGE3Q8WTP9 111 aa20.95■□□□□ 0.94
LIMS2-217ENST00000545738 TRAPPC3LQ5T215 181 aa20.94■□□□□ 0.94
LIMS2-217ENST00000545738 COPS6Q7L5N1 327 aa20.94■□□□□ 0.94
LIMS2-217ENST00000545738 BCL2L12Q9HB09 334 aa20.94■□□□□ 0.94
LIMS2-217ENST00000545738 AIMP1Q12904 312 aaKnown RBP20.93■□□□□ 0.94
LIMS2-217ENST00000545738 MRPL50Q8N5N7 158 aaKnown RBP20.93■□□□□ 0.94
LIMS2-217ENST00000545738 BCAR3O75815 825 aa20.92■□□□□ 0.94
LIMS2-217ENST00000545738 CAMTA2O94983 1202 aa20.92■□□□□ 0.94
LIMS2-217ENST00000545738 CT47B1P0C2W7 299 aaPredicted RBP20.92■□□□□ 0.94
LIMS2-217ENST00000545738 ADRA2BP18089 450 aa20.92■□□□□ 0.94
LIMS2-217ENST00000545738 USP42Q9H9J4 1324 aaKnown RBP20.92■□□□□ 0.94
LIMS2-217ENST00000545738 DZIP3Q86Y13 1208 aaKnown RBP20.92■□□□□ 0.94
LIMS2-217ENST00000545738 HLFQ16534 295 aa20.91■□□□□ 0.94
LIMS2-217ENST00000545738 USPL1Q5W0Q7 1092 aa20.91■□□□□ 0.94
LIMS2-217ENST00000545738 STK31Q9BXU1 1019 aa20.91■□□□□ 0.94
LIMS2-217ENST00000545738 HYPKQ9NX55 129 aa20.91■□□□□ 0.94
LIMS2-217ENST00000545738 ARFGEF2Q9Y6D5 1785 aa20.91■□□□□ 0.94
LIMS2-217ENST00000545738 NUP98P52948 1817 aa20.9■□□□□ 0.94
LIMS2-217ENST00000545738 ZBTB3Q9H5J0 574 aa20.9■□□□□ 0.94
LIMS2-217ENST00000545738 NARFQ9UHQ1 456 aa20.9■□□□□ 0.94
LIMS2-217ENST00000545738 GOLGB1Q14789 3259 aaKnown RBP20.9■□□□□ 0.94
LIMS2-217ENST00000545738 GYS1P13807 737 aa20.9■□□□□ 0.94
LIMS2-217ENST00000545738 HMGB2P26583 209 aaKnown RBP20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms