RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 CRACR2BQ8N4Y2 399 aaPredicted RBP14.99□□□□□ -0.01
CHD4-211ENST00000544484 TMOD2Q9NZR1 351 aa14.99□□□□□ -0.01
CHD4-211ENST00000544484 SLC5A1P13866 664 aa14.99□□□□□ -0.01
CHD4-211ENST00000544484 LDHAL6AQ6ZMR3 332 aa14.99□□□□□ -0.01
CHD4-211ENST00000544484 ECHDC1Q9NTX5 307 aa14.99□□□□□ -0.01
CHD4-211ENST00000544484 HMGN5P82970 282 aaKnown RBP14.98□□□□□ -0.01
CHD4-211ENST00000544484 C8orf76Q96K31 380 aa14.98□□□□□ -0.01
CHD4-211ENST00000544484 HSP90AB3PQ58FF7 597 aa14.98□□□□□ -0.01
CHD4-211ENST00000544484 GDPD2Q9HCC8 539 aa14.98□□□□□ -0.01
CHD4-211ENST00000544484 ERCC4Q92889 916 aaPredicted RBP14.98□□□□□ -0.01
CHD4-211ENST00000544484 SEPT11Q9NVA2 429 aaKnown RBP14.98□□□□□ -0.01
CHD4-211ENST00000544484 CBFA2T2O43439 604 aa14.98□□□□□ -0.01
CHD4-211ENST00000544484 CFAP100Q494V2 611 aa14.98□□□□□ -0.01
CHD4-211ENST00000544484 ZRANB1Q9UGI0 708 aa14.98□□□□□ -0.01
CHD4-211ENST00000544484 CCDC112Q8NEF3 446 aa14.98□□□□□ -0.01
CHD4-211ENST00000544484 DCAF8L1A6NGE4 600 aa14.97□□□□□ -0.01
CHD4-211ENST00000544484 NSD2O96028 1365 aa14.97□□□□□ -0.01
CHD4-211ENST00000544484 HAND2P61296 217 aa14.97□□□□□ -0.01
CHD4-211ENST00000544484 KLHL10Q6JEL2 608 aa14.97□□□□□ -0.01
CHD4-211ENST00000544484 KDM5BQ9UGL1 1544 aa14.97□□□□□ -0.01
CHD4-211ENST00000544484 AXDND1Q5T1B0 1012 aaPredicted RBP14.97□□□□□ -0.01
CHD4-211ENST00000544484 RAB11FIP4Q86YS3 637 aa14.97□□□□□ -0.01
CHD4-211ENST00000544484 LIMCH1Q9UPQ0 1083 aa14.97□□□□□ -0.01
CHD4-211ENST00000544484 PTPRKQ15262 1439 aa14.97□□□□□ -0.01
CHD4-211ENST00000544484 SLC4A8Q2Y0W8 1093 aa14.96□□□□□ -0.01
CHD4-211ENST00000544484 PAF1Q8N7H5 531 aa14.96□□□□□ -0.01
CHD4-211ENST00000544484 MEIS3Q99687 375 aa14.96□□□□□ -0.01
CHD4-211ENST00000544484 IFIT3O14879 490 aaKnown RBP14.96□□□□□ -0.01
CHD4-211ENST00000544484 SEC63Q9UGP8 760 aaKnown RBP14.96□□□□□ -0.01
CHD4-211ENST00000544484 SLC39A6Q13433 755 aa14.96□□□□□ -0.01
CHD4-211ENST00000544484 CCDC144CPQ8IYA2 1237 aa14.96□□□□□ -0.01
CHD4-211ENST00000544484 CWC25Q9NXE8 425 aaPredicted RBP14.96□□□□□ -0.01
CHD4-211ENST00000544484 SLC12A7Q9Y666 1083 aa14.96□□□□□ -0.01
CHD4-211ENST00000544484 GOLGA8BA8MQT2 603 aa14.96□□□□□ -0.01
CHD4-211ENST00000544484 CCDC181Q5TID7 509 aa14.96□□□□□ -0.01
CHD4-211ENST00000544484 CTCFLQ8NI51 663 aaPredicted RBP14.96□□□□□ -0.01
CHD4-211ENST00000544484 EIF5P55010 431 aaKnown RBP14.96□□□□□ -0.02
CHD4-211ENST00000544484 SH2B1Q9NRF2 756 aaPredicted RBP14.96□□□□□ -0.02
CHD4-211ENST00000544484 EVI5LQ96CN4 794 aa14.95□□□□□ -0.02
CHD4-211ENST00000544484 CHPF2Q9P2E5 772 aa14.95□□□□□ -0.02
CHD4-211ENST00000544484 TFIP11Q9UBB9 837 aaKnown RBP14.95□□□□□ -0.02
CHD4-211ENST00000544484 CEP131Q9UPN4 1083 aa14.95□□□□□ -0.02
CHD4-211ENST00000544484 ANKRD36BQ8N2N9 1353 aa14.95□□□□□ -0.02
CHD4-211ENST00000544484 ZNF444Q8N0Y2 327 aaPredicted RBP14.95□□□□□ -0.02
CHD4-211ENST00000544484 RPGRQ92834 1020 aaKnown RBP14.95□□□□□ -0.02
CHD4-211ENST00000544484 IQCA1Q86XH1 822 aa14.95□□□□□ -0.02
CHD4-211ENST00000544484 ZNF287Q9HBT7 754 aa14.95□□□□□ -0.02
CHD4-211ENST00000544484 MYO6Q9UM54 1294 aa14.95□□□□□ -0.02
CHD4-211ENST00000544484 C6orf229H3BNL8 230 aa14.95□□□□□ -0.02
CHD4-211ENST00000544484 LUC7LQ9NQ29 371 aaKnown RBP14.95□□□□□ -0.02
CHD4-211ENST00000544484 CKAP2LQ8IYA6 745 aa14.95□□□□□ -0.02
CHD4-211ENST00000544484 TNPO1Q92973 898 aaKnown RBP14.95□□□□□ -0.02
CHD4-211ENST00000544484 SMTNL1A8MU46 457 aa14.94□□□□□ -0.02
CHD4-211ENST00000544484 ESPNB1AK53 854 aa14.94□□□□□ -0.02
CHD4-211ENST00000544484 TNRQ92752 1358 aa14.94□□□□□ -0.02
CHD4-211ENST00000544484 PIK3R4Q99570 1358 aa14.94□□□□□ -0.02
CHD4-211ENST00000544484 RDXP35241 583 aaKnown RBP14.94□□□□□ -0.02
CHD4-211ENST00000544484 IBSPP21815 317 aaPredicted RBP14.94□□□□□ -0.02
CHD4-211ENST00000544484 ANKRD13DQ6ZTN6 518 aa14.94□□□□□ -0.02
CHD4-211ENST00000544484 SCAND2PQ9GZW5 306 aaPredicted RBP14.94□□□□□ -0.02
CHD4-211ENST00000544484 GOLGA8AA7E2F4 631 aa14.94□□□□□ -0.02
CHD4-211ENST00000544484 SNRPA1P09661 255 aaKnown RBP14.94□□□□□ -0.02
CHD4-211ENST00000544484 CCDC196A0A1B0GTZ2 297 aa14.94□□□□□ -0.02
CHD4-211ENST00000544484 CCDC96Q2M329 555 aa14.94□□□□□ -0.02
CHD4-211ENST00000544484 BMP2KLQ5H9B9 411 aa14.94□□□□□ -0.02
CHD4-211ENST00000544484 HMGB1P09429 215 aaKnown RBP14.93□□□□□ -0.02
CHD4-211ENST00000544484 MATR3P43243 847 aaKnown RBP eCLIP14.93□□□□□ -0.022e-6■■■■□ 22.9
CHD4-211ENST00000544484 C8orf58Q8NAV2 365 aa14.93□□□□□ -0.02
CHD4-211ENST00000544484 PCDHB15Q9Y5E8 787 aa14.93□□□□□ -0.02
CHD4-211ENST00000544484 PDIA4P13667 645 aaKnown RBP14.93□□□□□ -0.02
CHD4-211ENST00000544484 DDX46Q7L014 1031 aaKnown RBP14.93□□□□□ -0.02
CHD4-211ENST00000544484 CADPS2Q86UW7 1296 aa14.93□□□□□ -0.02
CHD4-211ENST00000544484 TTC22Q5TAA0 569 aa14.92□□□□□ -0.02
CHD4-211ENST00000544484 GJB2P29033 226 aa14.92□□□□□ -0.02
CHD4-211ENST00000544484 RHPN1Q8TCX5 695 aa14.92□□□□□ -0.02
CHD4-211ENST00000544484 XAGE3Q8WTP9 111 aa14.92□□□□□ -0.02
CHD4-211ENST00000544484 ATP10BO94823 1461 aa14.92□□□□□ -0.02
CHD4-211ENST00000544484 COPS6Q7L5N1 327 aa14.91□□□□□ -0.02
CHD4-211ENST00000544484 EPB41L2O43491 1005 aaKnown RBP14.91□□□□□ -0.02
CHD4-211ENST00000544484 MTERF4Q7Z6M4 381 aaKnown RBP14.91□□□□□ -0.02
CHD4-211ENST00000544484 IL16Q14005 1332 aa14.91□□□□□ -0.02
CHD4-211ENST00000544484 CCDC183Q5T5S1 534 aa14.91□□□□□ -0.02
CHD4-211ENST00000544484 MICU3Q86XE3 530 aa14.91□□□□□ -0.02
CHD4-211ENST00000544484 CABLES1Q8TDN4 633 aa14.91□□□□□ -0.02
CHD4-211ENST00000544484 LRRC59Q96AG4 307 aaKnown RBP14.91□□□□□ -0.02
CHD4-211ENST00000544484 TNNQ9UQP3 1299 aa14.91□□□□□ -0.02
CHD4-211ENST00000544484 SSRP1Q08945 709 aaKnown RBP14.91□□□□□ -0.02
CHD4-211ENST00000544484 ACSBG1Q96GR2 724 aa14.91□□□□□ -0.02
CHD4-211ENST00000544484 USP16Q9Y5T5 823 aa14.91□□□□□ -0.02
CHD4-211ENST00000544484 UQCRHLA0A096LP55 91 aa14.9□□□□□ -0.02
CHD4-211ENST00000544484 UQCRHP07919 91 aa14.9□□□□□ -0.02
CHD4-211ENST00000544484 MAP7D2Q96T17 732 aa14.9□□□□□ -0.02
CHD4-211ENST00000544484 PANK2Q9BZ23 570 aa14.9□□□□□ -0.02
CHD4-211ENST00000544484 H0YHG0 523 aa14.9□□□□□ -0.02
CHD4-211ENST00000544484 NLRP5P59047 1200 aa14.9□□□□□ -0.02
CHD4-211ENST00000544484 TCEANC2Q96MN5 208 aa14.9□□□□□ -0.02
CHD4-211ENST00000544484 PPIP5K1Q6PFW1 1433 aa14.9□□□□□ -0.02
CHD4-211ENST00000544484 EIF4A2Q14240 407 aaKnown RBP14.9□□□□□ -0.02
CHD4-211ENST00000544484 KRI1Q8N9T8 703 aaKnown RBP14.9□□□□□ -0.02
CHD4-211ENST00000544484 RNF41Q9H4P4 317 aaPredicted RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 115.4 ms