RNA–Protein interactions for RNA: ENST00000543955.5

PGAM5-204, Transcript of PGAM family member 5, mitochondrial serine/threonine protein phosphatase, humanhuman

TSL 2 BASIC

Gene PGAM5, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM5-204ENST00000543955 SMARCC1Q92922 1105 aaPredicted RBP26.89■■□□□ 1.9
PGAM5-204ENST00000543955 API5Q9BZZ5 524 aaKnown RBP26.89■■□□□ 1.9
PGAM5-204ENST00000543955 CHPF2Q9P2E5 772 aa26.89■■□□□ 1.9
PGAM5-204ENST00000543955 RGS12O14924 1447 aa26.89■■□□□ 1.9
PGAM5-204ENST00000543955 DZIP1LQ8IYY4 767 aaKnown RBP26.89■■□□□ 1.89
PGAM5-204ENST00000543955 KCNQ2O43526 872 aa26.88■■□□□ 1.89
PGAM5-204ENST00000543955 TEX13AQ9BXU3 409 aaPredicted RBP26.88■■□□□ 1.89
PGAM5-204ENST00000543955 ERBB4Q15303 1308 aa26.87■■□□□ 1.89
PGAM5-204ENST00000543955 PALLDQ8WX93 1383 aa26.87■■□□□ 1.89
PGAM5-204ENST00000543955 FAM182BQ5T319 152 aa26.86■■□□□ 1.89
PGAM5-204ENST00000543955 FAM196AQ6ZSG2 479 aa26.86■■□□□ 1.89
PGAM5-204ENST00000543955 RBM42Q9BTD8 480 aaKnown RBP26.86■■□□□ 1.89
PGAM5-204ENST00000543955 N4BP2Q86UW6 1770 aaPredicted RBP26.86■■□□□ 1.89
PGAM5-204ENST00000543955 FLIIQ13045 1269 aa26.85■■□□□ 1.89
PGAM5-204ENST00000543955 POTEAQ6S8J7 498 aa26.85■■□□□ 1.89
PGAM5-204ENST00000543955 DDX21Q9NR30 783 aaKnown RBP eCLIP26.85■■□□□ 1.89
PGAM5-204ENST00000543955 USP16Q9Y5T5 823 aa26.85■■□□□ 1.89
PGAM5-204ENST00000543955 PANK1Q8TE04 598 aa26.84■■□□□ 1.89
PGAM5-204ENST00000543955 CLUAP1Q96AJ1 413 aa26.84■■□□□ 1.89
PGAM5-204ENST00000543955 CRBNQ96SW2 442 aa26.84■■□□□ 1.89
PGAM5-204ENST00000543955 HYPKQ9NX55 129 aa26.84■■□□□ 1.89
PGAM5-204ENST00000543955 ABCC4O15439 1325 aa26.83■■□□□ 1.89
PGAM5-204ENST00000543955 TNNQ9UQP3 1299 aa26.83■■□□□ 1.89
PGAM5-204ENST00000543955 LY75O60449 1722 aa26.83■■□□□ 1.89
PGAM5-204ENST00000543955 RLBP1P12271 317 aa26.82■■□□□ 1.88
PGAM5-204ENST00000543955 G2E3Q7L622 706 aa26.82■■□□□ 1.88
PGAM5-204ENST00000543955 FKBP5Q13451 457 aaPredicted RBP26.81■■□□□ 1.88
PGAM5-204ENST00000543955 COL5A3P25940 1745 aaPredicted RBP26.81■■□□□ 1.88
PGAM5-204ENST00000543955 EXOC6Q8TAG9 804 aa26.81■■□□□ 1.88
PGAM5-204ENST00000543955 PXDNLA1KZ92 1463 aa26.8■■□□□ 1.88
PGAM5-204ENST00000543955 STARD3NLO95772 234 aa26.8■■□□□ 1.88
PGAM5-204ENST00000543955 PDIA6Q15084 440 aa26.8■■□□□ 1.88
PGAM5-204ENST00000543955 BCL11BQ9C0K0 894 aaPredicted RBP26.8■■□□□ 1.88
PGAM5-204ENST00000543955 LOC102724428A0A0B4J2F2 783 aa26.79■■□□□ 1.88
PGAM5-204ENST00000543955 SIK1P57059 783 aa26.79■■□□□ 1.88
PGAM5-204ENST00000543955 MVPQ14764 893 aaKnown RBP26.79■■□□□ 1.88
PGAM5-204ENST00000543955 ILDR1Q86SU0 546 aaPredicted RBP26.79■■□□□ 1.88
PGAM5-204ENST00000543955 COG6Q9Y2V7 657 aa26.79■■□□□ 1.88
PGAM5-204ENST00000543955 PROSER3Q2NL68 480 aa26.79■■□□□ 1.88
PGAM5-204ENST00000543955 DNAJC10Q8IXB1 793 aa26.79■■□□□ 1.88
PGAM5-204ENST00000543955 PHAXQ9H814 394 aaKnown RBP26.79■■□□□ 1.88
PGAM5-204ENST00000543955 ANXA1P04083 346 aa26.78■■□□□ 1.88
PGAM5-204ENST00000543955 SLC4A9Q96Q91 983 aa26.78■■□□□ 1.88
PGAM5-204ENST00000543955 TMEM57Q8N5G2 664 aa26.77■■□□□ 1.88
PGAM5-204ENST00000543955 RREB1Q92766 1687 aa26.77■■□□□ 1.88
PGAM5-204ENST00000543955 ITPRIPQ8IWB1 547 aa26.76■■□□□ 1.88
PGAM5-204ENST00000543955 DDX19BQ9UMR2 479 aa26.76■■□□□ 1.88
PGAM5-204ENST00000543955 MYL6BP14649 208 aa26.76■■□□□ 1.87
PGAM5-204ENST00000543955 ATP6V1AP38606 617 aa26.76■■□□□ 1.87
PGAM5-204ENST00000543955 PTF1AQ7RTS3 328 aa26.76■■□□□ 1.87
PGAM5-204ENST00000543955 DDX58O95786 925 aaKnown RBP26.75■■□□□ 1.87
PGAM5-204ENST00000543955 AAMPQ13685 434 aa26.75■■□□□ 1.87
PGAM5-204ENST00000543955 PPP4R2Q9NY27 417 aa26.74■■□□□ 1.87
PGAM5-204ENST00000543955 EP400Q96L91 3159 aa26.73■■□□□ 1.87
PGAM5-204ENST00000543955 CYP19A1P11511 503 aaPredicted RBP26.73■■□□□ 1.87
PGAM5-204ENST00000543955 INTS3Q68E01 1043 aaKnown RBP26.73■■□□□ 1.87
PGAM5-204ENST00000543955 LRP10Q7Z4F1 713 aa26.73■■□□□ 1.87
PGAM5-204ENST00000543955 CHMP4BQ9H444 224 aaKnown RBP26.73■■□□□ 1.87
PGAM5-204ENST00000543955 ARFGEF2Q9Y6D5 1785 aa26.73■■□□□ 1.87
PGAM5-204ENST00000543955 TAF1LQ8IZX4 1826 aa26.72■■□□□ 1.87
PGAM5-204ENST00000543955 A1BGP04217 495 aa26.72■■□□□ 1.87
PGAM5-204ENST00000543955 NBPF26B4DH59 902 aa26.71■■□□□ 1.87
PGAM5-204ENST00000543955 CCT4P50991 539 aaKnown RBP26.71■■□□□ 1.87
PGAM5-204ENST00000543955 NBPF14Q5TI25 921 aa26.71■■□□□ 1.87
PGAM5-204ENST00000543955 NBPF10Q6P3W6 841 aaKnown RBP26.71■■□□□ 1.87
PGAM5-204ENST00000543955 NBPF15Q8N660 670 aa26.71■■□□□ 1.87
PGAM5-204ENST00000543955 NUP188Q5SRE5 1749 aa26.71■■□□□ 1.87
PGAM5-204ENST00000543955 ADCY9O60503 1353 aa26.7■■□□□ 1.87
PGAM5-204ENST00000543955 F6X3S4 739 aa26.7■■□□□ 1.86
PGAM5-204ENST00000543955 XAGE3Q8WTP9 111 aa26.7■■□□□ 1.86
PGAM5-204ENST00000543955 TRIM37O94972 964 aa26.69■■□□□ 1.86
PGAM5-204ENST00000543955 PIP4K2AP48426 406 aaPredicted RBP26.69■■□□□ 1.86
PGAM5-204ENST00000543955 SLC4A10Q6U841 1118 aa26.69■■□□□ 1.86
PGAM5-204ENST00000543955 KSR2Q6VAB6 950 aa26.69■■□□□ 1.86
PGAM5-204ENST00000543955 TNS1Q9HBL0 1735 aaKnown RBP26.69■■□□□ 1.86
PGAM5-204ENST00000543955 PI4KAP2A4QPH2 592 aa26.69■■□□□ 1.86
PGAM5-204ENST00000543955 ITPK1Q13572 414 aa26.69■■□□□ 1.86
PGAM5-204ENST00000543955 COPS6Q7L5N1 327 aa26.69■■□□□ 1.86
PGAM5-204ENST00000543955 PI4KAP1Q8N8J0 262 aa26.69■■□□□ 1.86
PGAM5-204ENST00000543955 DNAAF4Q8WXU2 420 aa26.69■■□□□ 1.86
PGAM5-204ENST00000543955 ATP10DQ9P241 1426 aa26.68■■□□□ 1.86
PGAM5-204ENST00000543955 MYH14Q7Z406 1995 aaKnown RBP26.68■■□□□ 1.86
PGAM5-204ENST00000543955 AIMP1Q12904 312 aaKnown RBP26.68■■□□□ 1.86
PGAM5-204ENST00000543955 RGPD3A6NKT7 1758 aaPredicted RBP26.67■■□□□ 1.86
PGAM5-204ENST00000543955 RGPD4Q7Z3J3 1758 aa26.67■■□□□ 1.86
PGAM5-204ENST00000543955 CCDC87Q9NVE4 849 aa26.66■■□□□ 1.86
PGAM5-204ENST00000543955 CCNL1Q9UK58 526 aaPredicted RBP26.66■■□□□ 1.86
PGAM5-204ENST00000543955 ZBTB1Q9Y2K1 713 aa26.66■■□□□ 1.86
PGAM5-204ENST00000543955 CRKLP46109 303 aaKnown RBP26.65■■□□□ 1.86
PGAM5-204ENST00000543955 MAP3K2Q9Y2U5 619 aa26.65■■□□□ 1.86
PGAM5-204ENST00000543955 IL6STP40189 918 aaPredicted RBP26.64■■□□□ 1.86
PGAM5-204ENST00000543955 ANKRD13DQ6ZTN6 518 aa26.64■■□□□ 1.86
PGAM5-204ENST00000543955 RIC3Q7Z5B4 369 aa26.64■■□□□ 1.86
PGAM5-204ENST00000543955 CNTNAP4Q9C0A0 1308 aa26.64■■□□□ 1.86
PGAM5-204ENST00000543955 AFDNP55196 1824 aaKnown RBP26.63■■□□□ 1.85
PGAM5-204ENST00000543955 NPM2Q86SE8 214 aaKnown RBP26.63■■□□□ 1.85
PGAM5-204ENST00000543955 PLBD2Q8NHP8 589 aa26.63■■□□□ 1.85
PGAM5-204ENST00000543955 C4BP0C0L5 1744 aa26.62■■□□□ 1.85
PGAM5-204ENST00000543955 CCDC136Q96JN2 1154 aa26.62■■□□□ 1.85
PGAM5-204ENST00000543955 SRCIN1Q9C0H9 1055 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms