RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 INTS5Q6P9B9 1019 aaKnown RBP16.12■□□□□ 0.17
GABPB1-206ENST00000543881 TNS4Q8IZW8 715 aa16.12■□□□□ 0.17
GABPB1-206ENST00000543881 ADAMTS7Q9UKP4 1686 aa16.11■□□□□ 0.17
GABPB1-206ENST00000543881 RASSF7Q02833 373 aa16.11■□□□□ 0.17
GABPB1-206ENST00000543881 CC2D1BQ5T0F9 858 aaKnown RBP16.11■□□□□ 0.17
GABPB1-206ENST00000543881 ZPR1O75312 459 aa16.1■□□□□ 0.17
GABPB1-206ENST00000543881 USPL1Q5W0Q7 1092 aa16.1■□□□□ 0.17
GABPB1-206ENST00000543881 ZC3H4Q9UPT8 1303 aaKnown RBP16.1■□□□□ 0.17
GABPB1-206ENST00000543881 SCN11AQ9UI33 1791 aa16.09■□□□□ 0.17
GABPB1-206ENST00000543881 PCNTO95613 3336 aa16.09■□□□□ 0.17
GABPB1-206ENST00000543881 AFDNP55196 1824 aaKnown RBP16.08■□□□□ 0.17
GABPB1-206ENST00000543881 GLTPD2A6NH11 291 aa16.08■□□□□ 0.16
GABPB1-206ENST00000543881 VEGFAP15692 232 aaPredicted RBP16.08■□□□□ 0.16
GABPB1-206ENST00000543881 LMNB1P20700 586 aa16.08■□□□□ 0.16
GABPB1-206ENST00000543881 DNAJC10Q8IXB1 793 aa16.08■□□□□ 0.16
GABPB1-206ENST00000543881 SOS1Q07889 1333 aaPredicted RBP16.07■□□□□ 0.16
GABPB1-206ENST00000543881 HMOX1P09601 288 aa16.07■□□□□ 0.16
GABPB1-206ENST00000543881 PRELPP51888 382 aa16.07■□□□□ 0.16
GABPB1-206ENST00000543881 NFIXQ14938 502 aa16.07■□□□□ 0.16
GABPB1-206ENST00000543881 CNGB1Q14028 1251 aaPredicted RBP16.06■□□□□ 0.16
GABPB1-206ENST00000543881 CCDC88AQ3V6T2 1871 aa16.06■□□□□ 0.16
GABPB1-206ENST00000543881 DLEC1Q9Y238 1755 aa16.06■□□□□ 0.16
GABPB1-206ENST00000543881 NRXN2Q9P2S2 1712 aa16.06■□□□□ 0.16
GABPB1-206ENST00000543881 NPC1L1Q9UHC9 1359 aa16.05■□□□□ 0.16
GABPB1-206ENST00000543881 HSPA1AP0DMV8 641 aaKnown RBP16.05■□□□□ 0.16
GABPB1-206ENST00000543881 HSPA1BP0DMV9 641 aaKnown RBP16.05■□□□□ 0.16
GABPB1-206ENST00000543881 NARFQ9UHQ1 456 aa16.05■□□□□ 0.16
GABPB1-206ENST00000543881 DIAPH1O60610 1272 aaKnown RBP16.04■□□□□ 0.16
GABPB1-206ENST00000543881 CYP19A1P11511 503 aaPredicted RBP16.04■□□□□ 0.16
GABPB1-206ENST00000543881 AKAP4Q5JQC9 854 aa16.04■□□□□ 0.16
GABPB1-206ENST00000543881 TTLL6Q8N841 843 aa16.04■□□□□ 0.16
GABPB1-206ENST00000543881 SLC52A2Q9HAB3 445 aa16.04■□□□□ 0.16
GABPB1-206ENST00000543881 LGR6Q9HBX8 967 aa16.04■□□□□ 0.16
GABPB1-206ENST00000543881 TIAM2Q8IVF5 1701 aa16.04■□□□□ 0.16
GABPB1-206ENST00000543881 COL3A1P02461 1466 aaPredicted RBP16.04■□□□□ 0.16
GABPB1-206ENST00000543881 COL15A1P39059 1388 aa16.04■□□□□ 0.16
GABPB1-206ENST00000543881 SERPINB2P05120 415 aa16.03■□□□□ 0.16
GABPB1-206ENST00000543881 SLC39A6Q13433 755 aa16.03■□□□□ 0.16
GABPB1-206ENST00000543881 C2CD5Q86YS7 1000 aa16.03■□□□□ 0.16
GABPB1-206ENST00000543881 BCL2L12Q9HB09 334 aa16.03■□□□□ 0.16
GABPB1-206ENST00000543881 ZBTB1Q9Y2K1 713 aa16.03■□□□□ 0.16
GABPB1-206ENST00000543881 MTHFSDQ2M296 383 aaKnown RBP16.02■□□□□ 0.15
GABPB1-206ENST00000543881 H0YIN7 160 aa16.01■□□□□ 0.15
GABPB1-206ENST00000543881 NFKBIEO00221 500 aa16.01■□□□□ 0.15
GABPB1-206ENST00000543881 VIRMAQ69YN4 1812 aaKnown RBP16■□□□□ 0.15
GABPB1-206ENST00000543881 POTECB2RU33 542 aa16■□□□□ 0.15
GABPB1-206ENST00000543881 RNMTO43148 476 aaKnown RBP16■□□□□ 0.15
GABPB1-206ENST00000543881 DPY19L2Q6NUT2 758 aa16■□□□□ 0.15
GABPB1-206ENST00000543881 CARMIL3Q8ND23 1372 aa16■□□□□ 0.15
GABPB1-206ENST00000543881 MRC1P22897 1456 aa16■□□□□ 0.15
GABPB1-206ENST00000543881 CANXP27824 592 aaKnown RBP15.98■□□□□ 0.15
GABPB1-206ENST00000543881 BICDL1Q6ZP65 573 aa15.98■□□□□ 0.15
GABPB1-206ENST00000543881 VSIG10Q8N0Z9 540 aa15.97■□□□□ 0.15
GABPB1-206ENST00000543881 U2SURPO15042 1029 aaKnown RBP15.97■□□□□ 0.15
GABPB1-206ENST00000543881 ZNF622Q969S3 477 aaKnown RBP eCLIP15.97■□□□□ 0.154e-7■■□□□ 12.1
GABPB1-206ENST00000543881 DICER1Q9UPY3 1922 aaKnown RBP15.96■□□□□ 0.15
GABPB1-206ENST00000543881 ANKRD31Q8N7Z5 1873 aa15.96■□□□□ 0.15
GABPB1-206ENST00000543881 C21orf2O43822 256 aa15.96■□□□□ 0.14
GABPB1-206ENST00000543881 ERFEQ4G0M1 354 aa15.96■□□□□ 0.14
GABPB1-206ENST00000543881 ZNF219Q9P2Y4 722 aaPredicted RBP15.96■□□□□ 0.14
GABPB1-206ENST00000543881 FER1L6Q2WGJ9 1857 aa15.95■□□□□ 0.14
GABPB1-206ENST00000543881 TBC1D9BQ66K14 1250 aa15.95■□□□□ 0.14
GABPB1-206ENST00000543881 CREBZFQ9NS37 354 aa15.95■□□□□ 0.14
GABPB1-206ENST00000543881 UBR2Q8IWV8 1755 aa15.95■□□□□ 0.14
GABPB1-206ENST00000543881 A0A087WZG4 1122 aa15.94■□□□□ 0.14
GABPB1-206ENST00000543881 PDE6BP35913 854 aa15.94■□□□□ 0.14
GABPB1-206ENST00000543881 EIF5P55010 431 aaKnown RBP15.94■□□□□ 0.14
GABPB1-206ENST00000543881 CHADLQ6NUI6 762 aa15.94■□□□□ 0.14
GABPB1-206ENST00000543881 BRIP1Q9BX63 1249 aa15.94■□□□□ 0.14
GABPB1-206ENST00000543881 MKRN1Q9UHC7 482 aaKnown RBP15.94■□□□□ 0.14
GABPB1-206ENST00000543881 PDZRN3Q9UPQ7 1066 aa15.94■□□□□ 0.14
GABPB1-206ENST00000543881 STARD3NLO95772 234 aa15.93■□□□□ 0.14
GABPB1-206ENST00000543881 CCDC24Q8N4L8 307 aa15.93■□□□□ 0.14
GABPB1-206ENST00000543881 IL17REQ8NFR9 667 aa15.93■□□□□ 0.14
GABPB1-206ENST00000543881 COL11A2P13942 1736 aaPredicted RBP15.93■□□□□ 0.14
GABPB1-206ENST00000543881 PPP2R1AP30153 589 aa15.92■□□□□ 0.14
GABPB1-206ENST00000543881 TTC5Q8N0Z6 440 aa15.92■□□□□ 0.14
GABPB1-206ENST00000543881 PHACTR3Q96KR7 559 aa15.92■□□□□ 0.14
GABPB1-206ENST00000543881 DDNO94850 711 aaPredicted RBP15.91■□□□□ 0.14
GABPB1-206ENST00000543881 POTEIP0CG38 1075 aa15.91■□□□□ 0.14
GABPB1-206ENST00000543881 POTEJP0CG39 1038 aa15.91■□□□□ 0.14
GABPB1-206ENST00000543881 PRR5LQ6MZQ0 368 aa15.91■□□□□ 0.14
GABPB1-206ENST00000543881 RSPH6AQ9H0K4 717 aa15.91■□□□□ 0.14
GABPB1-206ENST00000543881 TAOK3Q9H2K8 898 aa15.91■□□□□ 0.14
GABPB1-206ENST00000543881 LTBP3Q9NS15 1303 aa15.91■□□□□ 0.14
GABPB1-206ENST00000543881 SCN7AQ01118 1682 aa15.91■□□□□ 0.14
GABPB1-206ENST00000543881 GNAT3A8MTJ3 354 aa15.91■□□□□ 0.14
GABPB1-206ENST00000543881 GAS2L2Q8NHY3 880 aa15.91■□□□□ 0.14
GABPB1-206ENST00000543881 TBC1D2BQ9UPU7 963 aa15.91■□□□□ 0.14
GABPB1-206ENST00000543881 ZNF330Q9Y3S2 320 aaPredicted RBP15.91■□□□□ 0.14
GABPB1-206ENST00000543881 PRKAR2BP31323 418 aa15.9■□□□□ 0.14
GABPB1-206ENST00000543881 CFAP53Q96M91 514 aa15.9■□□□□ 0.14
GABPB1-206ENST00000543881 SLX4Q8IY92 1834 aa15.89■□□□□ 0.14
GABPB1-206ENST00000543881 CACNA1SQ13698 1873 aa15.89■□□□□ 0.13
GABPB1-206ENST00000543881 FOXN1O15353 648 aa15.89■□□□□ 0.13
GABPB1-206ENST00000543881 CNKSR1Q969H4 720 aa15.89■□□□□ 0.13
GABPB1-206ENST00000543881 ZNF496Q96IT1 587 aaPredicted RBP15.89■□□□□ 0.13
GABPB1-206ENST00000543881 NPHP1O15259 732 aa15.88■□□□□ 0.13
GABPB1-206ENST00000543881 STYK1Q6J9G0 422 aa15.88■□□□□ 0.13
GABPB1-206ENST00000543881 PRPF40BQ6NWY9 871 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms