RNA–Protein interactions for RNA: ENST00000543496.3

TPBG-203, Transcript of trophoblast glycoprotein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TPBG, Length 2,881 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPBG-203ENST00000543496 SNX14Q9Y5W7 946 aa20.74■□□□□ 0.91
TPBG-203ENST00000543496 METP08581 1390 aa20.74■□□□□ 0.91
TPBG-203ENST00000543496 GTF2E1P29083 439 aaPredicted RBP20.74■□□□□ 0.91
TPBG-203ENST00000543496 IL17RAQ96F46 866 aa20.74■□□□□ 0.91
TPBG-203ENST00000543496 PRR36Q9H6K5 1346 aa20.74■□□□□ 0.91
TPBG-203ENST00000543496 CPA1P15085 419 aa20.73■□□□□ 0.91
TPBG-203ENST00000543496 GTF2F1P35269 517 aaKnown RBP eCLIP20.73■□□□□ 0.91
TPBG-203ENST00000543496 SPC24Q8NBT2 197 aa20.73■□□□□ 0.91
TPBG-203ENST00000543496 SPTLC3Q9NUV7 552 aa20.73■□□□□ 0.91
TPBG-203ENST00000543496 SMC3Q9UQE7 1217 aa20.73■□□□□ 0.91
TPBG-203ENST00000543496 C3P01024 1663 aa20.73■□□□□ 0.91
TPBG-203ENST00000543496 F13A1P00488 732 aa20.73■□□□□ 0.91
TPBG-203ENST00000543496 RASEFQ8IZ41 740 aa20.73■□□□□ 0.91
TPBG-203ENST00000543496 MAP3K19Q56UN5 1328 aa20.73■□□□□ 0.91
TPBG-203ENST00000543496 AP5Z1O43299 807 aa20.72■□□□□ 0.91
TPBG-203ENST00000543496 PPP4R3BQ5MIZ7 849 aa20.72■□□□□ 0.91
TPBG-203ENST00000543496 RUFY3Q7L099 469 aa20.72■□□□□ 0.91
TPBG-203ENST00000543496 BCL2L12Q9HB09 334 aa20.71■□□□□ 0.91
TPBG-203ENST00000543496 PYCARDQ9ULZ3 195 aa20.71■□□□□ 0.91
TPBG-203ENST00000543496 TTC14Q96N46 770 aa20.71■□□□□ 0.91
TPBG-203ENST00000543496 LIMCH1Q9UPQ0 1083 aa20.71■□□□□ 0.91
TPBG-203ENST00000543496 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.71■□□□□ 0.91
TPBG-203ENST00000543496 TTC21BQ7Z4L5 1316 aa20.71■□□□□ 0.91
TPBG-203ENST00000543496 RAD50Q92878 1312 aa20.71■□□□□ 0.91
TPBG-203ENST00000543496 RICTORQ6R327 1708 aa20.71■□□□□ 0.91
TPBG-203ENST00000543496 SETD1AO15047 1707 aaKnown RBP20.71■□□□□ 0.91
TPBG-203ENST00000543496 DNM1Q05193 864 aaKnown RBP20.71■□□□□ 0.91
TPBG-203ENST00000543496 A2ML1A8K2U0 1454 aa20.7■□□□□ 0.91
TPBG-203ENST00000543496 RIMS1Q86UR5 1692 aaKnown RBP20.7■□□□□ 0.9
TPBG-203ENST00000543496 ITSN1Q15811 1721 aa20.7■□□□□ 0.9
TPBG-203ENST00000543496 ZSCAN20P17040 1043 aaPredicted RBP20.7■□□□□ 0.9
TPBG-203ENST00000543496 SGSM2O43147 1006 aa20.7■□□□□ 0.9
TPBG-203ENST00000543496 SURF6O75683 361 aaKnown RBP20.7■□□□□ 0.9
TPBG-203ENST00000543496 LARGE1O95461 756 aa20.7■□□□□ 0.9
TPBG-203ENST00000543496 DMTNQ08495 405 aa20.7■□□□□ 0.9
TPBG-203ENST00000543496 KCNF1Q9H3M0 494 aa20.7■□□□□ 0.9
TPBG-203ENST00000543496 SPG7Q9UQ90 795 aa20.7■□□□□ 0.9
TPBG-203ENST00000543496 UBTFL1P0CB47 393 aaPredicted RBP20.69■□□□□ 0.9
TPBG-203ENST00000543496 ATP2B3Q16720 1220 aa20.69■□□□□ 0.9
TPBG-203ENST00000543496 FUCA2Q9BTY2 467 aa20.69■□□□□ 0.9
TPBG-203ENST00000543496 CCDC30Q5VVM6 783 aa20.69■□□□□ 0.9
TPBG-203ENST00000543496 CWC27Q6UX04 472 aaKnown RBP20.69■□□□□ 0.9
TPBG-203ENST00000543496 CCDC83Q8IWF9 413 aa20.69■□□□□ 0.9
TPBG-203ENST00000543496 USP44Q9H0E7 712 aa20.69■□□□□ 0.9
TPBG-203ENST00000543496 AKAP12Q02952 1782 aa20.69■□□□□ 0.9
TPBG-203ENST00000543496 SOS1Q07889 1333 aaPredicted RBP20.68■□□□□ 0.9
TPBG-203ENST00000543496 KIAA1524Q8TCG1 905 aa20.68■□□□□ 0.9
TPBG-203ENST00000543496 ATP6V1DQ9Y5K8 247 aa20.68■□□□□ 0.9
TPBG-203ENST00000543496 CASTP20810 708 aaKnown RBP20.68■□□□□ 0.9
TPBG-203ENST00000543496 LSG1Q9H089 658 aaKnown RBP20.68■□□□□ 0.9
TPBG-203ENST00000543496 AOX1Q06278 1338 aa20.68■□□□□ 0.9
TPBG-203ENST00000543496 CHMP3Q9Y3E7 222 aa20.68■□□□□ 0.9
TPBG-203ENST00000543496 GJB2P29033 226 aa20.67■□□□□ 0.9
TPBG-203ENST00000543496 PI4K2BQ8TCG2 481 aa20.67■□□□□ 0.9
TPBG-203ENST00000543496 PEAK1Q9H792 1746 aa20.67■□□□□ 0.9
TPBG-203ENST00000543496 RIOK3O14730 519 aaKnown RBP20.67■□□□□ 0.9
TPBG-203ENST00000543496 ACEP12821 1306 aa20.66■□□□□ 0.9
TPBG-203ENST00000543496 VPS37CA5D8V6 355 aaPredicted RBP20.66■□□□□ 0.9
TPBG-203ENST00000543496 SPDYE4A6NLX3 237 aa20.66■□□□□ 0.9
TPBG-203ENST00000543496 CHAF1AQ13111 956 aaPredicted RBP20.66■□□□□ 0.9
TPBG-203ENST00000543496 PPP1R42Q7Z4L9 355 aa20.66■□□□□ 0.9
TPBG-203ENST00000543496 ARHGEF10O15013 1369 aa20.66■□□□□ 0.9
TPBG-203ENST00000543496 EPB41L2O43491 1005 aaKnown RBP20.65■□□□□ 0.9
TPBG-203ENST00000543496 RHPN1Q8TCX5 695 aa20.65■□□□□ 0.9
TPBG-203ENST00000543496 PDCL2Q8N4E4 241 aa20.65■□□□□ 0.9
TPBG-203ENST00000543496 DDX54Q8TDD1 881 aaKnown RBP20.65■□□□□ 0.9
TPBG-203ENST00000543496 CNTROBQ8N137 903 aa20.64■□□□□ 0.9
TPBG-203ENST00000543496 SSH3Q8TE77 659 aa20.64■□□□□ 0.9
TPBG-203ENST00000543496 MTMR6Q9Y217 621 aa20.64■□□□□ 0.9
TPBG-203ENST00000543496 DIAPH3Q9NSV4 1193 aa20.64■□□□□ 0.89
TPBG-203ENST00000543496 XRN1Q8IZH2 1706 aaKnown RBP20.64■□□□□ 0.89
TPBG-203ENST00000543496 UTP14CQ5TAP6 766 aaKnown RBP20.64■□□□□ 0.89
TPBG-203ENST00000543496 MLECQ14165 292 aa20.63■□□□□ 0.89
TPBG-203ENST00000543496 HYPKQ9NX55 129 aa20.63■□□□□ 0.89
TPBG-203ENST00000543496 NAP1L2Q9ULW6 460 aaPredicted RBP20.63■□□□□ 0.89
TPBG-203ENST00000543496 OVOS2A0A0J9YW53 1432 aa20.63■□□□□ 0.89
TPBG-203ENST00000543496 OVOS2Q6IE36 1432 aa20.63■□□□□ 0.89
TPBG-203ENST00000543496 RGPD1P0DJD0 1748 aa20.63■□□□□ 0.89
TPBG-203ENST00000543496 CCDC192P0DO97 292 aa20.63■□□□□ 0.89
TPBG-203ENST00000543496 SRGAP3O43295 1099 aa20.62■□□□□ 0.89
TPBG-203ENST00000543496 CAMK4Q16566 473 aa20.62■□□□□ 0.89
TPBG-203ENST00000543496 JAKMIP1Q96N16 626 aaKnown RBP20.62■□□□□ 0.89
TPBG-203ENST00000543496 RAB11FIP3O75154 756 aa20.62■□□□□ 0.89
TPBG-203ENST00000543496 ADCK5Q3MIX3 580 aa20.62■□□□□ 0.89
TPBG-203ENST00000543496 PHAXQ9H814 394 aaKnown RBP20.62■□□□□ 0.89
TPBG-203ENST00000543496 GOLGA6L6A8MZA4 724 aa20.61■□□□□ 0.89
TPBG-203ENST00000543496 PTGS1P23219 599 aa20.61■□□□□ 0.89
TPBG-203ENST00000543496 PDRG1Q9NUG6 133 aa20.61■□□□□ 0.89
TPBG-203ENST00000543496 NRXN3Q9Y4C0 1643 aa20.61■□□□□ 0.89
TPBG-203ENST00000543496 PDIA4P13667 645 aaKnown RBP20.61■□□□□ 0.89
TPBG-203ENST00000543496 NECAB1Q8N987 351 aa20.61■□□□□ 0.89
TPBG-203ENST00000543496 U2AF2P26368 475 aaKnown RBP eCLIP20.6■□□□□ 0.89
TPBG-203ENST00000543496 PRPF40BQ6NWY9 871 aaKnown RBP20.6■□□□□ 0.89
TPBG-203ENST00000543496 EYA1Q99502 592 aa20.6■□□□□ 0.89
TPBG-203ENST00000543496 TPM3P06753 285 aa20.6■□□□□ 0.89
TPBG-203ENST00000543496 PTH1RQ03431 593 aa20.6■□□□□ 0.89
TPBG-203ENST00000543496 FERMT3Q86UX7 667 aa20.6■□□□□ 0.89
TPBG-203ENST00000543496 FAM208AQ9UK61 1670 aaKnown RBP20.6■□□□□ 0.89
TPBG-203ENST00000543496 FAM173BQ6P4H8 233 aa20.6■□□□□ 0.89
TPBG-203ENST00000543496 KIF1BPQ96EK5 621 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms