RNA–Protein interactions for RNA: ENST00000543470.5

RPS6KC1-207, Transcript of ribosomal protein S6 kinase C1, humanhuman

TSL 2 BASIC

Gene RPS6KC1, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS6KC1-207ENST00000543470 KIF1BO60333 1816 aa17.16■□□□□ 0.34
RPS6KC1-207ENST00000543470 LARP1BQ659C4 914 aaKnown RBP17.16■□□□□ 0.34
RPS6KC1-207ENST00000543470 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.16■□□□□ 0.34
RPS6KC1-207ENST00000543470 GIMAP6Q6P9H5 292 aa17.15■□□□□ 0.34
RPS6KC1-207ENST00000543470 ANKRD20A12PQ8NF67 263 aa17.15■□□□□ 0.34
RPS6KC1-207ENST00000543470 CBX1P83916 185 aa17.15■□□□□ 0.34
RPS6KC1-207ENST00000543470 SMC2O95347 1197 aa17.14■□□□□ 0.33
RPS6KC1-207ENST00000543470 FLIIQ13045 1269 aa17.14■□□□□ 0.33
RPS6KC1-207ENST00000543470 CAMK4Q16566 473 aa17.14■□□□□ 0.33
RPS6KC1-207ENST00000543470 CEP89Q96ST8 783 aa17.14■□□□□ 0.33
RPS6KC1-207ENST00000543470 YTHDC2Q9H6S0 1430 aaKnown RBP17.14■□□□□ 0.33
RPS6KC1-207ENST00000543470 PTPRCP08575 1304 aa17.14■□□□□ 0.33
RPS6KC1-207ENST00000543470 CASTP20810 708 aaKnown RBP17.14■□□□□ 0.33
RPS6KC1-207ENST00000543470 CPA1P15085 419 aa17.14■□□□□ 0.33
RPS6KC1-207ENST00000543470 HOOK1Q9UJC3 728 aaKnown RBP17.13■□□□□ 0.33
RPS6KC1-207ENST00000543470 ZHX1Q9UKY1 873 aaPredicted RBP17.13■□□□□ 0.33
RPS6KC1-207ENST00000543470 ERICH2A1L162 156 aa17.13■□□□□ 0.33
RPS6KC1-207ENST00000543470 MYOM1P52179 1685 aa17.13■□□□□ 0.33
RPS6KC1-207ENST00000543470 RIMS2Q9UQ26 1411 aa17.13■□□□□ 0.33
RPS6KC1-207ENST00000543470 JAKMIP1Q96N16 626 aaKnown RBP17.13■□□□□ 0.33
RPS6KC1-207ENST00000543470 HMGN5P82970 282 aaKnown RBP17.13■□□□□ 0.33
RPS6KC1-207ENST00000543470 NAT10Q9H0A0 1025 aaKnown RBP17.13■□□□□ 0.33
RPS6KC1-207ENST00000543470 HS1BP3Q53T59 392 aa17.12■□□□□ 0.33
RPS6KC1-207ENST00000543470 MTERF4Q7Z6M4 381 aaKnown RBP17.12■□□□□ 0.33
RPS6KC1-207ENST00000543470 CCDC192P0DO97 292 aa17.12■□□□□ 0.33
RPS6KC1-207ENST00000543470 CHMLP26374 656 aa17.12■□□□□ 0.33
RPS6KC1-207ENST00000543470 ESCO1Q5FWF5 840 aa17.12■□□□□ 0.33
RPS6KC1-207ENST00000543470 CCDC183Q5T5S1 534 aa17.12■□□□□ 0.33
RPS6KC1-207ENST00000543470 KRT85P78386 507 aa17.11■□□□□ 0.33
RPS6KC1-207ENST00000543470 STK38Q15208 465 aa17.11■□□□□ 0.33
RPS6KC1-207ENST00000543470 FILIP1Q7Z7B0 1213 aa17.11■□□□□ 0.33
RPS6KC1-207ENST00000543470 ZCCHC11Q5TAX3 1644 aaKnown RBP17.11■□□□□ 0.33
RPS6KC1-207ENST00000543470 PNMA6EA0A0J9YXQ4 647 aa17.11■□□□□ 0.33
RPS6KC1-207ENST00000543470 ZNF530Q6P9A1 599 aaPredicted RBP17.11■□□□□ 0.33
RPS6KC1-207ENST00000543470 TNMDQ9H2S6 317 aa17.11■□□□□ 0.33
RPS6KC1-207ENST00000543470 ZDHHC9Q9Y397 364 aa17.11■□□□□ 0.33
RPS6KC1-207ENST00000543470 SHROOM2Q13796 1616 aa17.11■□□□□ 0.33
RPS6KC1-207ENST00000543470 AK9Q5TCS8 1911 aa17.11■□□□□ 0.33
RPS6KC1-207ENST00000543470 DYNC1I1O14576 645 aa17.11■□□□□ 0.33
RPS6KC1-207ENST00000543470 ME1P48163 572 aa17.11■□□□□ 0.33
RPS6KC1-207ENST00000543470 TEX35Q5T0J7 233 aa17.11■□□□□ 0.33
RPS6KC1-207ENST00000543470 ZFYVE9O95405 1425 aa17.1■□□□□ 0.33
RPS6KC1-207ENST00000543470 RRP12Q5JTH9 1297 aaKnown RBP17.1■□□□□ 0.33
RPS6KC1-207ENST00000543470 RTL1A6NKG5 1358 aa17.1■□□□□ 0.33
RPS6KC1-207ENST00000543470 LETM1O95202 739 aaPredicted RBP17.1■□□□□ 0.33
RPS6KC1-207ENST00000543470 ANXA1P04083 346 aa17.1■□□□□ 0.33
RPS6KC1-207ENST00000543470 MYL6BP14649 208 aa17.1■□□□□ 0.33
RPS6KC1-207ENST00000543470 MCM5P33992 734 aa17.1■□□□□ 0.33
RPS6KC1-207ENST00000543470 PRPF40BQ6NWY9 871 aaKnown RBP17.1■□□□□ 0.33
RPS6KC1-207ENST00000543470 NOLC1Q14978 699 aaKnown RBP eCLIP17.1■□□□□ 0.33
RPS6KC1-207ENST00000543470 BLOC1S2Q6QNY1 142 aa17.1■□□□□ 0.33
RPS6KC1-207ENST00000543470 ARGLU1Q9NWB6 273 aaPredicted RBP17.1■□□□□ 0.33
RPS6KC1-207ENST00000543470 STX6O43752 255 aa17.09■□□□□ 0.33
RPS6KC1-207ENST00000543470 ZNF853P0CG23 659 aa17.09■□□□□ 0.33
RPS6KC1-207ENST00000543470 BRPF1P55201 1214 aaPredicted RBP17.09■□□□□ 0.33
RPS6KC1-207ENST00000543470 NCOA3Q9Y6Q9 1424 aa17.09■□□□□ 0.33
RPS6KC1-207ENST00000543470 PLEKHO1Q53GL0 409 aaPredicted RBP17.09■□□□□ 0.33
RPS6KC1-207ENST00000543470 CCDC70Q6NSX1 233 aa17.09■□□□□ 0.33
RPS6KC1-207ENST00000543470 AACSQ86V21 672 aa17.09■□□□□ 0.33
RPS6KC1-207ENST00000543470 MTHFSDQ2M296 383 aaKnown RBP17.09■□□□□ 0.33
RPS6KC1-207ENST00000543470 OLFM4Q6UX06 510 aa17.09■□□□□ 0.33
RPS6KC1-207ENST00000543470 USHBP1Q8N6Y0 703 aa17.09■□□□□ 0.33
RPS6KC1-207ENST00000543470 CHL1O00533 1208 aa17.08■□□□□ 0.33
RPS6KC1-207ENST00000543470 PPP1R42Q7Z4L9 355 aa17.08■□□□□ 0.33
RPS6KC1-207ENST00000543470 CKAP2LQ8IYA6 745 aa17.08■□□□□ 0.33
RPS6KC1-207ENST00000543470 SPDYE4A6NLX3 237 aa17.08■□□□□ 0.32
RPS6KC1-207ENST00000543470 BRD1O95696 1058 aa17.08■□□□□ 0.32
RPS6KC1-207ENST00000543470 TCEANC2Q96MN5 208 aa17.08■□□□□ 0.32
RPS6KC1-207ENST00000543470 PDRG1Q9NUG6 133 aa17.08■□□□□ 0.32
RPS6KC1-207ENST00000543470 FAM177A1Q8N128 213 aaPredicted RBP17.08■□□□□ 0.32
RPS6KC1-207ENST00000543470 NECAB1Q8N987 351 aa17.08■□□□□ 0.32
RPS6KC1-207ENST00000543470 DDX11Q96FC9 970 aa17.08■□□□□ 0.32
RPS6KC1-207ENST00000543470 JARID2Q92833 1246 aaPredicted RBP17.07■□□□□ 0.32
RPS6KC1-207ENST00000543470 QRICH2Q9H0J4 1663 aa17.07■□□□□ 0.32
RPS6KC1-207ENST00000543470 EFCAB6Q5THR3 1501 aa17.07■□□□□ 0.32
RPS6KC1-207ENST00000543470 ZNF500O60304 480 aaPredicted RBP17.07■□□□□ 0.32
RPS6KC1-207ENST00000543470 UNC5CLQ8IV45 518 aa17.07■□□□□ 0.32
RPS6KC1-207ENST00000543470 LIMCH1Q9UPQ0 1083 aa17.07■□□□□ 0.32
RPS6KC1-207ENST00000543470 CHD1O14646 1710 aa17.07■□□□□ 0.32
RPS6KC1-207ENST00000543470 DNM1Q05193 864 aaKnown RBP17.07■□□□□ 0.32
RPS6KC1-207ENST00000543470 TFIP11Q9UBB9 837 aaKnown RBP17.07■□□□□ 0.32
RPS6KC1-207ENST00000543470 NAP1L1P55209 391 aaKnown RBP17.06■□□□□ 0.32
RPS6KC1-207ENST00000543470 TULP4Q9NRJ4 1543 aa17.06■□□□□ 0.32
RPS6KC1-207ENST00000543470 GJB2P29033 226 aa17.06■□□□□ 0.32
RPS6KC1-207ENST00000543470 CCDC47Q96A33 483 aaKnown RBP17.06■□□□□ 0.32
RPS6KC1-207ENST00000543470 ZSCAN22P10073 491 aaPredicted RBP17.06■□□□□ 0.32
RPS6KC1-207ENST00000543470 AK2P54819 239 aa17.05■□□□□ 0.32
RPS6KC1-207ENST00000543470 ERC1Q8IUD2 1116 aa17.05■□□□□ 0.32
RPS6KC1-207ENST00000543470 ACEP12821 1306 aa17.05■□□□□ 0.32
RPS6KC1-207ENST00000543470 POGZQ7Z3K3 1410 aa17.05■□□□□ 0.32
RPS6KC1-207ENST00000543470 HIP1O00291 1037 aa17.05■□□□□ 0.32
RPS6KC1-207ENST00000543470 ATP8B2P98198 1209 aa17.05■□□□□ 0.32
RPS6KC1-207ENST00000543470 TAF7Q15545 349 aaPredicted RBP17.05■□□□□ 0.32
RPS6KC1-207ENST00000543470 HSP90B2PQ58FF3 399 aa17.05■□□□□ 0.32
RPS6KC1-207ENST00000543470 SAMD1Q6SPF0 538 aaPredicted RBP17.05■□□□□ 0.32
RPS6KC1-207ENST00000543470 SPATA32Q96LK8 384 aa17.05■□□□□ 0.32
RPS6KC1-207ENST00000543470 PTCH1Q13635 1447 aa17.05■□□□□ 0.32
RPS6KC1-207ENST00000543470 FAM135BQ49AJ0 1406 aa17.05■□□□□ 0.32
RPS6KC1-207ENST00000543470 PPP4R3BQ5MIZ7 849 aa17.04■□□□□ 0.32
RPS6KC1-207ENST00000543470 CCDC85AQ96PX6 553 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms