RNA–Protein interactions for RNA: ENST00000543445.5

LDHA-221, Transcript of lactate dehydrogenase A, humanhuman

TSL 3

Gene LDHA, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-221ENST00000543445 USP17L13C9JLJ4 530 aa8.86□□□□□ -0.99
LDHA-221ENST00000543445 USP17L12C9JPN9 530 aa8.86□□□□□ -0.99
LDHA-221ENST00000543445 USP17L11C9JVI0 530 aa8.86□□□□□ -0.99
LDHA-221ENST00000543445 USP17L21D6R901 530 aa8.86□□□□□ -0.99
LDHA-221ENST00000543445 USP17L18D6R9N7 530 aa8.86□□□□□ -0.99
LDHA-221ENST00000543445 USP17L22D6RA61 530 aa8.86□□□□□ -0.99
LDHA-221ENST00000543445 USP17L17D6RBQ6 530 aa8.86□□□□□ -0.99
LDHA-221ENST00000543445 USP17L19D6RCP7 530 aa8.86□□□□□ -0.99
LDHA-221ENST00000543445 USP17L20D6RJB6 530 aa8.86□□□□□ -0.99
LDHA-221ENST00000543445 RASA1P20936 1047 aa8.86□□□□□ -0.99
LDHA-221ENST00000543445 USP17L24Q0WX57 530 aa8.86□□□□□ -0.99
LDHA-221ENST00000543445 SLFNL1Q499Z3 407 aa8.86□□□□□ -0.99
LDHA-221ENST00000543445 RNF19BQ6ZMZ0 732 aa8.86□□□□□ -0.99
LDHA-221ENST00000543445 FAM200AQ8TCP9 573 aa8.86□□□□□ -0.99
LDHA-221ENST00000543445 SALL2Q9Y467 1007 aaPredicted RBP8.86□□□□□ -0.99
LDHA-221ENST00000543445 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.85□□□□□ -0.99
LDHA-221ENST00000543445 TRPM2O94759 1503 aa8.85□□□□□ -0.99
LDHA-221ENST00000543445 ERBB3P21860 1342 aa8.85□□□□□ -0.99
LDHA-221ENST00000543445 AHDC1Q5TGY3 1603 aaPredicted RBP8.85□□□□□ -0.99
LDHA-221ENST00000543445 F12P00748 615 aaPredicted RBP8.85□□□□□ -0.99
LDHA-221ENST00000543445 SSFA2P28290 1259 aa8.85□□□□□ -0.99
LDHA-221ENST00000543445 CTHP32929 405 aa8.85□□□□□ -0.99
LDHA-221ENST00000543445 PBX2P40425 430 aa8.85□□□□□ -0.99
LDHA-221ENST00000543445 MCCD1P59942 119 aaPredicted RBP8.85□□□□□ -0.99
LDHA-221ENST00000543445 PHLDB3Q6NSJ2 640 aa8.85□□□□□ -0.99
LDHA-221ENST00000543445 BLOC1S3Q6QNY0 202 aa8.85□□□□□ -0.99
LDHA-221ENST00000543445 LRCH3Q96II8 777 aa8.85□□□□□ -0.99
LDHA-221ENST00000543445 C19orf44Q9H6X5 657 aa8.85□□□□□ -0.99
LDHA-221ENST00000543445 CEP126Q9P2H0 1117 aa8.85□□□□□ -0.99
LDHA-221ENST00000543445 SETBP1Q9Y6X0 1596 aa8.85□□□□□ -0.99
LDHA-221ENST00000543445 METP08581 1390 aa8.85□□□□□ -0.99
LDHA-221ENST00000543445 ATP5J2-PTCD1G3V325 749 aa8.84□□□□□ -0.99
LDHA-221ENST00000543445 LZTS3O60299 673 aaPredicted RBP8.84□□□□□ -0.99
LDHA-221ENST00000543445 PTK2Q05397 1052 aa8.84□□□□□ -0.99
LDHA-221ENST00000543445 CRTC2Q53ET0 693 aaPredicted RBP8.84□□□□□ -0.99
LDHA-221ENST00000543445 VARS2Q5ST30 1063 aaKnown RBP8.84□□□□□ -0.99
LDHA-221ENST00000543445 BRICD5Q6PL45 260 aa8.84□□□□□ -0.99
LDHA-221ENST00000543445 POTEEQ6S8J3 1075 aa8.84□□□□□ -0.99
LDHA-221ENST00000543445 BRINP3Q76B58 766 aa8.84□□□□□ -0.99
LDHA-221ENST00000543445 RNF135Q8IUD6 432 aa8.84□□□□□ -0.99
LDHA-221ENST00000543445 XRN1Q8IZH2 1706 aaKnown RBP8.84□□□□□ -0.99
LDHA-221ENST00000543445 FAM174AQ8TBP5 190 aa8.84□□□□□ -0.99
LDHA-221ENST00000543445 CDCA7Q9BWT1 371 aaPredicted RBP8.84□□□□□ -0.99
LDHA-221ENST00000543445 MAP10Q9P2G4 905 aa8.84□□□□□ -0.99
LDHA-221ENST00000543445 IGSF3O75054 1194 aa8.83□□□□□ -1
LDHA-221ENST00000543445 FMNL1O95466 1100 aaPredicted RBP8.83□□□□□ -1
LDHA-221ENST00000543445 JUNDP17535 347 aa8.83□□□□□ -1
LDHA-221ENST00000543445 ATF3P18847 181 aa8.83□□□□□ -1
LDHA-221ENST00000543445 ERCC3P19447 782 aa8.83□□□□□ -1
LDHA-221ENST00000543445 PTK7Q13308 1070 aa8.83□□□□□ -1
LDHA-221ENST00000543445 NCOA4Q13772 614 aa8.83□□□□□ -1
LDHA-221ENST00000543445 PTPRNQ16849 979 aa8.83□□□□□ -1
LDHA-221ENST00000543445 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.83□□□□□ -1
LDHA-221ENST00000543445 GPSM3Q9Y4H4 160 aa8.83□□□□□ -1
LDHA-221ENST00000543445 DCCP43146 1447 aa8.82□□□□□ -1
LDHA-221ENST00000543445 MST1RQ04912 1400 aa8.82□□□□□ -1
LDHA-221ENST00000543445 NAIPQ13075 1403 aa8.82□□□□□ -1
LDHA-221ENST00000543445 RRBP1Q9P2E9 1410 aaKnown RBP8.82□□□□□ -1
LDHA-221ENST00000543445 NEXMIFQ5QGS0 1516 aa8.82□□□□□ -1
LDHA-221ENST00000543445 RBM47A0AV96 593 aaKnown RBP8.82□□□□□ -1
LDHA-221ENST00000543445 MRPL50Q8N5N7 158 aaKnown RBP8.82□□□□□ -1
LDHA-221ENST00000543445 ARMC2Q8NEN0 867 aa8.82□□□□□ -1
LDHA-221ENST00000543445 CLP1Q92989 425 aaKnown RBP8.82□□□□□ -1
LDHA-221ENST00000543445 CLTCL1P53675 1640 aa8.82□□□□□ -1
LDHA-221ENST00000543445 SPHKAPQ2M3C7 1700 aa8.82□□□□□ -1
LDHA-221ENST00000543445 SPATA31A6Q5VVP1 1343 aa8.81□□□□□ -1
LDHA-221ENST00000543445 ASXL1Q8IXJ9 1541 aa8.81□□□□□ -1
LDHA-221ENST00000543445 SETD1AO15047 1707 aaKnown RBP8.81□□□□□ -1
LDHA-221ENST00000543445 BHMG1C9JSJ3 638 aaPredicted RBP8.81□□□□□ -1
LDHA-221ENST00000543445 ANKMY2Q8IV38 441 aa8.81□□□□□ -1
LDHA-221ENST00000543445 PLPP7Q8NBV4 271 aa8.81□□□□□ -1
LDHA-221ENST00000543445 PCDHB9Q9Y5E1 797 aa8.81□□□□□ -1
LDHA-221ENST00000543445 NR1I2O75469 434 aa8.8□□□□□ -1
LDHA-221ENST00000543445 EML3Q32P44 896 aa8.8□□□□□ -1
LDHA-221ENST00000543445 ZNF326Q5BKZ1 582 aaKnown RBP8.8□□□□□ -1
LDHA-221ENST00000543445 PDXDC2PQ6P474 469 aa8.8□□□□□ -1
LDHA-221ENST00000543445 SCUBE3Q8IX30 993 aa8.8□□□□□ -1
LDHA-221ENST00000543445 GPKOWQ92917 476 aaPredicted RBP eCLIP8.8□□□□□ -1
LDHA-221ENST00000543445 SHPRHQ149N8 1683 aa8.8□□□□□ -1
LDHA-221ENST00000543445 SETD5Q9C0A6 1442 aa8.8□□□□□ -1
LDHA-221ENST00000543445 ADGRL3Q9HAR2 1447 aa8.8□□□□□ -1
LDHA-221ENST00000543445 UNCXA6NJT0 531 aa8.79□□□□□ -1
LDHA-221ENST00000543445 ATP2B4P23634 1241 aa8.79□□□□□ -1
LDHA-221ENST00000543445 PPP4CP60510 307 aa8.79□□□□□ -1
LDHA-221ENST00000543445 MAP7D1Q3KQU3 841 aa8.79□□□□□ -1
LDHA-221ENST00000543445 PHTF2Q8N3S3 785 aa8.79□□□□□ -1
LDHA-221ENST00000543445 DDX17Q92841 729 aaKnown RBP8.79□□□□□ -1
LDHA-221ENST00000543445 SOWAHDA6NJG2 315 aa8.78□□□□□ -1
LDHA-221ENST00000543445 SWI5Q1ZZU3 235 aa8.78□□□□□ -1
LDHA-221ENST00000543445 TRIM50Q86XT4 487 aa8.78□□□□□ -1
LDHA-221ENST00000543445 OGFOD1Q8N543 542 aa8.78□□□□□ -1
LDHA-221ENST00000543445 THAP11Q96EK4 314 aa8.78□□□□□ -1
LDHA-221ENST00000543445 EVA1BQ9NVM1 165 aa8.78□□□□□ -1
LDHA-221ENST00000543445 NHSL1Q5SYE7 1610 aa8.78□□□□□ -1
LDHA-221ENST00000543445 NALCNQ8IZF0 1738 aa8.77□□□□□ -1
LDHA-221ENST00000543445 ROBO2Q9HCK4 1378 aa8.77□□□□□ -1.01
LDHA-221ENST00000543445 CCNYL3P0C7X3 344 aa8.77□□□□□ -1.01
LDHA-221ENST00000543445 ATP1A2P50993 1020 aa8.77□□□□□ -1.01
LDHA-221ENST00000543445 DPYDQ12882 1025 aa8.77□□□□□ -1.01
LDHA-221ENST00000543445 NBPF14Q5TI25 921 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms