RNA–Protein interactions for RNA: ENST00000543091.1

LRP6-206, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best) BASIC

Gene LRP6, Length 4,774 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-206ENST00000543091 KSR2Q6VAB6 950 aa9.52□□□□□ -0.88
LRP6-206ENST00000543091 TPTE2Q6XPS3 522 aa9.52□□□□□ -0.88
LRP6-206ENST00000543091 DDX46Q7L014 1031 aaKnown RBP9.52□□□□□ -0.88
LRP6-206ENST00000543091 ANXA1P04083 346 aa9.52□□□□□ -0.89
LRP6-206ENST00000543091 TOMM22Q9NS69 142 aa9.52□□□□□ -0.89
LRP6-206ENST00000543091 NIP7Q9Y221 180 aaKnown RBP eCLIP9.52□□□□□ -0.89
LRP6-206ENST00000543091 CHL1O00533 1208 aa9.52□□□□□ -0.89
LRP6-206ENST00000543091 TMEM57Q8N5G2 664 aa9.52□□□□□ -0.89
LRP6-206ENST00000543091 ANKRD18BA2A2Z9 1011 aa9.52□□□□□ -0.89
LRP6-206ENST00000543091 F6X3S4 739 aa9.52□□□□□ -0.89
LRP6-206ENST00000543091 ALDH1L1O75891 902 aa9.52□□□□□ -0.89
LRP6-206ENST00000543091 C8orf58Q8NAV2 365 aa9.52□□□□□ -0.89
LRP6-206ENST00000543091 TSHZ2Q9NRE2 1034 aa9.52□□□□□ -0.89
LRP6-206ENST00000543091 CRB1P82279 1406 aa9.52□□□□□ -0.89
LRP6-206ENST00000543091 NLRP3Q96P20 1036 aa9.51□□□□□ -0.89
LRP6-206ENST00000543091 ATP5J2-PTCD1G3V325 749 aa9.51□□□□□ -0.89
LRP6-206ENST00000543091 SIL1Q9H173 461 aa9.51□□□□□ -0.89
LRP6-206ENST00000543091 C1orf115Q9H7X2 142 aa9.51□□□□□ -0.89
LRP6-206ENST00000543091 LRRC7Q96NW7 1537 aa9.51□□□□□ -0.89
LRP6-206ENST00000543091 USP19O94966 1318 aa9.51□□□□□ -0.89
LRP6-206ENST00000543091 DNAJC10Q8IXB1 793 aa9.51□□□□□ -0.89
LRP6-206ENST00000543091 CCDC85AQ96PX6 553 aaPredicted RBP9.51□□□□□ -0.89
LRP6-206ENST00000543091 LNPKQ9C0E8 428 aa9.51□□□□□ -0.89
LRP6-206ENST00000543091 AKAP2Q9Y2D5 859 aa9.51□□□□□ -0.89
LRP6-206ENST00000543091 ZNF496Q96IT1 587 aaPredicted RBP9.5□□□□□ -0.89
LRP6-206ENST00000543091 TRIM37O94972 964 aa9.5□□□□□ -0.89
LRP6-206ENST00000543091 IFIT1P09914 478 aaKnown RBP9.5□□□□□ -0.89
LRP6-206ENST00000543091 CCDC152Q4G0S7 254 aa9.5□□□□□ -0.89
LRP6-206ENST00000543091 METTL24Q5JXM2 366 aa9.5□□□□□ -0.89
LRP6-206ENST00000543091 TTC39AQ5SRH9 613 aa9.5□□□□□ -0.89
LRP6-206ENST00000543091 UBE3BQ7Z3V4 1068 aa9.5□□□□□ -0.89
LRP6-206ENST00000543091 LINS1Q8NG48 757 aa9.5□□□□□ -0.89
LRP6-206ENST00000543091 UTP14AQ9BVJ6 771 aaKnown RBP9.5□□□□□ -0.89
LRP6-206ENST00000543091 PARP10Q53GL7 1025 aa9.5□□□□□ -0.89
LRP6-206ENST00000543091 LRRCC1Q9C099 1032 aa9.5□□□□□ -0.89
LRP6-206ENST00000543091 AXIN2Q9Y2T1 843 aa9.5□□□□□ -0.89
LRP6-206ENST00000543091 IL17REQ8NFR9 667 aa9.5□□□□□ -0.89
LRP6-206ENST00000543091 ERBB4Q15303 1308 aa9.49□□□□□ -0.89
LRP6-206ENST00000543091 APPP05067 770 aa9.49□□□□□ -0.89
LRP6-206ENST00000543091 ZNF622Q969S3 477 aaKnown RBP eCLIP9.49□□□□□ -0.893e-7■■■■□ 22
LRP6-206ENST00000543091 MFAP1P55081 439 aaKnown RBP9.49□□□□□ -0.89
LRP6-206ENST00000543091 LOC102724428A0A0B4J2F2 783 aa9.49□□□□□ -0.89
LRP6-206ENST00000543091 OVOS2A0A0G2JMS6 1433 aa9.49□□□□□ -0.89
LRP6-206ENST00000543091 OVOS2A0A0J9YW53 1432 aa9.49□□□□□ -0.89
LRP6-206ENST00000543091 VAMP4O75379 141 aa9.49□□□□□ -0.89
LRP6-206ENST00000543091 SIK1P57059 783 aa9.49□□□□□ -0.89
LRP6-206ENST00000543091 OVOS2Q6IE36 1432 aa9.49□□□□□ -0.89
LRP6-206ENST00000543091 ANKIB1Q9P2G1 1089 aa9.49□□□□□ -0.89
LRP6-206ENST00000543091 TRIM35Q9UPQ4 493 aa9.48□□□□□ -0.89
LRP6-206ENST00000543091 REC8O95072 547 aa9.48□□□□□ -0.89
LRP6-206ENST00000543091 WASHC4Q2M389 1173 aa9.48□□□□□ -0.89
LRP6-206ENST00000543091 HSCBQ8IWL3 235 aa9.48□□□□□ -0.89
LRP6-206ENST00000543091 RBM19Q9Y4C8 960 aaKnown RBP9.48□□□□□ -0.89
LRP6-206ENST00000543091 SIGLEC1Q9BZZ2 1709 aa9.48□□□□□ -0.89
LRP6-206ENST00000543091 PNPLA6Q8IY17 1366 aa9.48□□□□□ -0.89
LRP6-206ENST00000543091 TRIM27P14373 513 aa9.48□□□□□ -0.89
LRP6-206ENST00000543091 CAVIN4Q5BKX8 364 aa9.48□□□□□ -0.89
LRP6-206ENST00000543091 CNTROBQ8N137 903 aa9.48□□□□□ -0.89
LRP6-206ENST00000543091 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.48□□□□□ -0.89
LRP6-206ENST00000543091 EIF4A1P60842 406 aaKnown RBP9.48□□□□□ -0.89
LRP6-206ENST00000543091 HIP1O00291 1037 aa9.47□□□□□ -0.89
LRP6-206ENST00000543091 RAB11FIP3O75154 756 aa9.47□□□□□ -0.89
LRP6-206ENST00000543091 NCLP19338 710 aaKnown RBP9.47□□□□□ -0.89
LRP6-206ENST00000543091 PIP4K2AP48426 406 aaPredicted RBP9.47□□□□□ -0.89
LRP6-206ENST00000543091 PLBD2Q8NHP8 589 aa9.47□□□□□ -0.89
LRP6-206ENST00000543091 CHMP4CQ96CF2 233 aa9.47□□□□□ -0.89
LRP6-206ENST00000543091 KIF1BPQ96EK5 621 aa9.47□□□□□ -0.89
LRP6-206ENST00000543091 FSD1Q9BTV5 496 aa9.47□□□□□ -0.89
LRP6-206ENST00000543091 MRPL50Q8N5N7 158 aaKnown RBP9.47□□□□□ -0.89
LRP6-206ENST00000543091 ZSCAN25Q6NSZ9 544 aa9.47□□□□□ -0.89
LRP6-206ENST00000543091 CNBD1Q8NA66 436 aa9.47□□□□□ -0.89
LRP6-206ENST00000543091 LRRFIP2Q9Y608 721 aaKnown RBP9.47□□□□□ -0.89
LRP6-206ENST00000543091 CPDO75976 1380 aa9.47□□□□□ -0.89
LRP6-206ENST00000543091 NCAPD2Q15021 1401 aa9.46□□□□□ -0.89
LRP6-206ENST00000543091 GRM8O00222 908 aa9.46□□□□□ -0.89
LRP6-206ENST00000543091 A1BGP04217 495 aa9.46□□□□□ -0.89
LRP6-206ENST00000543091 ZKSCAN1P17029 563 aaPredicted RBP9.46□□□□□ -0.89
LRP6-206ENST00000543091 RNF20Q5VTR2 975 aa9.46□□□□□ -0.89
LRP6-206ENST00000543091 LDHAL6AQ6ZMR3 332 aa9.46□□□□□ -0.89
LRP6-206ENST00000543091 MYO5BQ9ULV0 1848 aa9.46□□□□□ -0.89
LRP6-206ENST00000543091 GOLGA6L22H0YM25 854 aa9.46□□□□□ -0.89
LRP6-206ENST00000543091 SLC5A1P13866 664 aa9.46□□□□□ -0.89
LRP6-206ENST00000543091 TRDNQ13061 729 aa9.46□□□□□ -0.89
LRP6-206ENST00000543091 AACSQ86V21 672 aa9.46□□□□□ -0.89
LRP6-206ENST00000543091 DNAJC2Q99543 621 aaKnown RBP9.46□□□□□ -0.89
LRP6-206ENST00000543091 C6orf229H3BNL8 230 aa9.46□□□□□ -0.9
LRP6-206ENST00000543091 KRT24Q2M2I5 525 aa9.46□□□□□ -0.9
LRP6-206ENST00000543091 BARGINQ6ZT62 677 aa9.46□□□□□ -0.9
LRP6-206ENST00000543091 ANKRD18AQ8IVF6 992 aa9.46□□□□□ -0.9
LRP6-206ENST00000543091 TSPYL6Q8N831 410 aa9.46□□□□□ -0.9
LRP6-206ENST00000543091 SSH2Q76I76 1423 aa9.46□□□□□ -0.9
LRP6-206ENST00000543091 SPATA31A1Q5TZJ5 1347 aa9.46□□□□□ -0.9
LRP6-206ENST00000543091 TAOK2Q9UL54 1235 aa9.46□□□□□ -0.9
LRP6-206ENST00000543091 GIGYF1O75420 1035 aaPredicted RBP9.45□□□□□ -0.9
LRP6-206ENST00000543091 FAM182BQ5T319 152 aa9.45□□□□□ -0.9
LRP6-206ENST00000543091 SH3TC1Q8TE82 1336 aa9.45□□□□□ -0.9
LRP6-206ENST00000543091 ITSN1Q15811 1721 aa9.45□□□□□ -0.9
LRP6-206ENST00000543091 INTS3Q68E01 1043 aaKnown RBP9.45□□□□□ -0.9
LRP6-206ENST00000543091 PLEKHF1Q96S99 279 aa9.45□□□□□ -0.9
LRP6-206ENST00000543091 ASAP1Q9ULH1 1129 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms