RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 EIF2S2P20042 333 aaKnown RBP26.91■■□□□ 1.9
OTUB1-211ENST00000543004 TWISTNBQ3B726 338 aaPredicted RBP26.91■■□□□ 1.9
OTUB1-211ENST00000543004 PIP4K2AP48426 406 aaPredicted RBP26.9■■□□□ 1.9
OTUB1-211ENST00000543004 VAMP4O75379 141 aa26.88■■□□□ 1.89
OTUB1-211ENST00000543004 A1BGP04217 495 aa26.88■■□□□ 1.89
OTUB1-211ENST00000543004 TCERG1O14776 1098 aaKnown RBP26.87■■□□□ 1.89
OTUB1-211ENST00000543004 CRKLP46109 303 aaKnown RBP26.87■■□□□ 1.89
OTUB1-211ENST00000543004 SMIM5Q71RC9 77 aa26.87■■□□□ 1.89
OTUB1-211ENST00000543004 TEX13AQ9BXU3 409 aaPredicted RBP26.87■■□□□ 1.89
OTUB1-211ENST00000543004 STARD3NLO95772 234 aa26.86■■□□□ 1.89
OTUB1-211ENST00000543004 INTS5Q6P9B9 1019 aaKnown RBP26.86■■□□□ 1.89
OTUB1-211ENST00000543004 ANO8Q9HCE9 1232 aaPredicted RBP26.86■■□□□ 1.89
OTUB1-211ENST00000543004 HOXB7P09629 217 aa26.85■■□□□ 1.89
OTUB1-211ENST00000543004 ZNF827Q17R98 1081 aa26.85■■□□□ 1.89
OTUB1-211ENST00000543004 HDGFL1Q5TGJ6 251 aa26.85■■□□□ 1.89
OTUB1-211ENST00000543004 ZBTB1Q9Y2K1 713 aa26.85■■□□□ 1.89
OTUB1-211ENST00000543004 TUBGCP6Q96RT7 1819 aa26.85■■□□□ 1.89
OTUB1-211ENST00000543004 AMIGO3Q86WK7 504 aa26.84■■□□□ 1.89
OTUB1-211ENST00000543004 NBPF26B4DH59 902 aa26.83■■□□□ 1.89
OTUB1-211ENST00000543004 ANXA1P04083 346 aa26.83■■□□□ 1.89
OTUB1-211ENST00000543004 NBPF14Q5TI25 921 aa26.83■■□□□ 1.89
OTUB1-211ENST00000543004 NBPF10Q6P3W6 841 aaKnown RBP26.83■■□□□ 1.89
OTUB1-211ENST00000543004 NBPF15Q8N660 670 aa26.83■■□□□ 1.89
OTUB1-211ENST00000543004 UBR3Q6ZT12 1888 aa26.83■■□□□ 1.88
OTUB1-211ENST00000543004 CANXP27824 592 aaKnown RBP26.83■■□□□ 1.88
OTUB1-211ENST00000543004 CCDC87Q9NVE4 849 aa26.83■■□□□ 1.88
OTUB1-211ENST00000543004 SOCS7O14512 581 aa26.82■■□□□ 1.88
OTUB1-211ENST00000543004 PROSER3Q2NL68 480 aa26.82■■□□□ 1.88
OTUB1-211ENST00000543004 CNTNAP4Q9C0A0 1308 aa26.82■■□□□ 1.88
OTUB1-211ENST00000543004 PDIA6Q15084 440 aa26.81■■□□□ 1.88
OTUB1-211ENST00000543004 AKT1S1Q96B36 256 aa26.81■■□□□ 1.88
OTUB1-211ENST00000543004 CHPF2Q9P2E5 772 aa26.81■■□□□ 1.88
OTUB1-211ENST00000543004 GNPATO15228 680 aa26.8■■□□□ 1.88
OTUB1-211ENST00000543004 MYL6BP14649 208 aa26.8■■□□□ 1.88
OTUB1-211ENST00000543004 AK7Q96M32 723 aa26.79■■□□□ 1.88
OTUB1-211ENST00000543004 SOS1Q07889 1333 aaPredicted RBP26.79■■□□□ 1.88
OTUB1-211ENST00000543004 RC3H1Q5TC82 1133 aaKnown RBP26.79■■□□□ 1.88
OTUB1-211ENST00000543004 ZNF330Q9Y3S2 320 aaPredicted RBP26.78■■□□□ 1.88
OTUB1-211ENST00000543004 CCDC30Q5VVM6 783 aa26.77■■□□□ 1.88
OTUB1-211ENST00000543004 BCL2L13Q9BXK5 485 aa26.77■■□□□ 1.88
OTUB1-211ENST00000543004 PHF14O94880 888 aa26.76■■□□□ 1.87
OTUB1-211ENST00000543004 SLC15A2Q16348 729 aa26.76■■□□□ 1.87
OTUB1-211ENST00000543004 LRP10Q7Z4F1 713 aa26.76■■□□□ 1.87
OTUB1-211ENST00000543004 RPS6KA4O75676 772 aa26.75■■□□□ 1.87
OTUB1-211ENST00000543004 SSH1Q8WYL5 1049 aa26.75■■□□□ 1.87
OTUB1-211ENST00000543004 DDX21Q9NR30 783 aaKnown RBP eCLIP26.75■■□□□ 1.87
OTUB1-211ENST00000543004 TFCP2L1Q9NZI6 479 aa26.75■■□□□ 1.87
OTUB1-211ENST00000543004 DBF4Q9UBU7 674 aaPredicted RBP26.75■■□□□ 1.87
OTUB1-211ENST00000543004 STK32BQ9NY57 414 aa26.74■■□□□ 1.87
OTUB1-211ENST00000543004 C4AP0C0L4 1744 aa26.73■■□□□ 1.87
OTUB1-211ENST00000543004 SLC4A2P04920 1241 aa26.73■■□□□ 1.87
OTUB1-211ENST00000543004 EIF5P55010 431 aaKnown RBP26.73■■□□□ 1.87
OTUB1-211ENST00000543004 PHAXQ9H814 394 aaKnown RBP26.73■■□□□ 1.87
OTUB1-211ENST00000543004 RTCBQ9Y3I0 505 aaKnown RBP26.73■■□□□ 1.87
OTUB1-211ENST00000543004 CACNA1FO60840 1977 aa26.73■■□□□ 1.87
OTUB1-211ENST00000543004 ERBB4Q15303 1308 aa26.73■■□□□ 1.87
OTUB1-211ENST00000543004 CT47B1P0C2W7 299 aaPredicted RBP26.72■■□□□ 1.87
OTUB1-211ENST00000543004 IL6STP40189 918 aaPredicted RBP26.72■■□□□ 1.87
OTUB1-211ENST00000543004 RARSP54136 660 aaKnown RBP26.72■■□□□ 1.87
OTUB1-211ENST00000543004 G2E3Q7L622 706 aa26.72■■□□□ 1.87
OTUB1-211ENST00000543004 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.72■■□□□ 1.87
OTUB1-211ENST00000543004 STK31Q9BXU1 1019 aa26.72■■□□□ 1.87
OTUB1-211ENST00000543004 COL15A1P39059 1388 aa26.71■■□□□ 1.87
OTUB1-211ENST00000543004 QSER1Q2KHR3 1735 aa26.71■■□□□ 1.87
OTUB1-211ENST00000543004 PNPLA7Q6ZV29 1317 aa26.7■■□□□ 1.86
OTUB1-211ENST00000543004 BCAR3O75815 825 aa26.69■■□□□ 1.86
OTUB1-211ENST00000543004 AIMP1Q12904 312 aaKnown RBP26.69■■□□□ 1.86
OTUB1-211ENST00000543004 TTLL7Q6ZT98 887 aa26.69■■□□□ 1.86
OTUB1-211ENST00000543004 MRPL50Q8N5N7 158 aaKnown RBP26.69■■□□□ 1.86
OTUB1-211ENST00000543004 ARHGEF1Q92888 912 aaKnown RBP26.69■■□□□ 1.86
OTUB1-211ENST00000543004 PDGFDQ9GZP0 370 aaPredicted RBP26.69■■□□□ 1.86
OTUB1-211ENST00000543004 XAGE3Q8WTP9 111 aa26.68■■□□□ 1.86
OTUB1-211ENST00000543004 ARXQ96QS3 562 aa26.68■■□□□ 1.86
OTUB1-211ENST00000543004 SMC4Q9NTJ3 1288 aa26.68■■□□□ 1.86
OTUB1-211ENST00000543004 TBC1D2BQ9UPU7 963 aa26.68■■□□□ 1.86
OTUB1-211ENST00000543004 HMGB2P26583 209 aaKnown RBP26.68■■□□□ 1.86
OTUB1-211ENST00000543004 COPS6Q7L5N1 327 aa26.68■■□□□ 1.86
OTUB1-211ENST00000543004 COL23A1Q86Y22 540 aaPredicted RBP26.68■■□□□ 1.86
OTUB1-211ENST00000543004 ZNF428Q96B54 188 aa26.68■■□□□ 1.86
OTUB1-211ENST00000543004 HYPKQ9NX55 129 aa26.68■■□□□ 1.86
OTUB1-211ENST00000543004 SSFA2P28290 1259 aa26.67■■□□□ 1.86
OTUB1-211ENST00000543004 R3HDM1Q15032 1099 aaKnown RBP26.67■■□□□ 1.86
OTUB1-211ENST00000543004 ALDH1L2Q3SY69 923 aa26.67■■□□□ 1.86
OTUB1-211ENST00000543004 TRAPPC3LQ5T215 181 aa26.67■■□□□ 1.86
OTUB1-211ENST00000543004 CHMP4AQ9BY43 222 aa26.67■■□□□ 1.86
OTUB1-211ENST00000543004 SRP68Q9UHB9 627 aaKnown RBP26.66■■□□□ 1.86
OTUB1-211ENST00000543004 PSDA5PKW4 1024 aaPredicted RBP26.65■■□□□ 1.86
OTUB1-211ENST00000543004 DZIP3Q86Y13 1208 aaKnown RBP26.65■■□□□ 1.86
OTUB1-211ENST00000543004 RCAN3Q9UKA8 241 aa26.65■■□□□ 1.86
OTUB1-211ENST00000543004 MSH5O43196 834 aa26.64■■□□□ 1.85
OTUB1-211ENST00000543004 BCORQ6W2J9 1755 aa26.63■■□□□ 1.85
OTUB1-211ENST00000543004 FLIIQ13045 1269 aa26.63■■□□□ 1.85
OTUB1-211ENST00000543004 NPM2Q86SE8 214 aaKnown RBP26.63■■□□□ 1.85
OTUB1-211ENST00000543004 RFC4P35249 363 aa26.62■■□□□ 1.85
OTUB1-211ENST00000543004 ZBTB3Q9H5J0 574 aa26.62■■□□□ 1.85
OTUB1-211ENST00000543004 ADRA2BP18089 450 aa26.61■■□□□ 1.85
OTUB1-211ENST00000543004 SCN7AQ01118 1682 aa26.61■■□□□ 1.85
OTUB1-211ENST00000543004 NUP98P52948 1817 aa26.61■■□□□ 1.85
OTUB1-211ENST00000543004 ARFGEF2Q9Y6D5 1785 aa26.61■■□□□ 1.85
OTUB1-211ENST00000543004 USPL1Q5W0Q7 1092 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms