RNA–Protein interactions for RNA: ENST00000542996.6

CALU-206, Transcript of calumenin, humanhuman

TSL 1 (best) BASIC

Gene CALU, Length 4,225 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALU-206ENST00000542996 ALS2Q96Q42 1657 aa13.14□□□□□ -0.31
CALU-206ENST00000542996 BECN1Q14457 450 aa13.14□□□□□ -0.31
CALU-206ENST00000542996 NOL8Q76FK4 1167 aaKnown RBP13.14□□□□□ -0.31
CALU-206ENST00000542996 TTC14Q96N46 770 aa13.14□□□□□ -0.31
CALU-206ENST00000542996 TBX22Q9Y458 520 aa13.14□□□□□ -0.31
CALU-206ENST00000542996 SHANK3Q9BYB0 1731 aa13.14□□□□□ -0.31
CALU-206ENST00000542996 CEP350Q5VT06 3117 aa13.13□□□□□ -0.31
CALU-206ENST00000542996 KDM6AO15550 1401 aaPredicted RBP13.13□□□□□ -0.31
CALU-206ENST00000542996 USP34Q70CQ2 3546 aa13.13□□□□□ -0.31
CALU-206ENST00000542996 SSH3Q8TE77 659 aa13.13□□□□□ -0.31
CALU-206ENST00000542996 USP16Q9Y5T5 823 aa13.13□□□□□ -0.31
CALU-206ENST00000542996 COL4A1P02462 1669 aa13.13□□□□□ -0.31
CALU-206ENST00000542996 ATP8B2P98198 1209 aa13.13□□□□□ -0.31
CALU-206ENST00000542996 PTPRCP08575 1304 aa13.13□□□□□ -0.31
CALU-206ENST00000542996 NWD2Q9ULI1 1742 aa13.12□□□□□ -0.31
CALU-206ENST00000542996 SASH1O94885 1247 aa13.12□□□□□ -0.31
CALU-206ENST00000542996 ZSCAN23Q3MJ62 389 aa13.12□□□□□ -0.31
CALU-206ENST00000542996 PPP1R42Q7Z4L9 355 aa13.12□□□□□ -0.31
CALU-206ENST00000542996 MPNDQ8N594 471 aa13.12□□□□□ -0.31
CALU-206ENST00000542996 API5Q9BZZ5 524 aaKnown RBP13.12□□□□□ -0.31
CALU-206ENST00000542996 IGKV5-2P06315 115 aa13.12□□□□□ -0.31
CALU-206ENST00000542996 STAP2Q9UGK3 403 aa13.12□□□□□ -0.31
CALU-206ENST00000542996 MCTP1Q6DN14 999 aa13.12□□□□□ -0.31
CALU-206ENST00000542996 RUFY3Q7L099 469 aa13.12□□□□□ -0.31
CALU-206ENST00000542996 RPAP2Q8IXW5 612 aaPredicted RBP13.12□□□□□ -0.31
CALU-206ENST00000542996 ADAMTSL3P82987 1691 aa13.11□□□□□ -0.31
CALU-206ENST00000542996 PI4KAP2A4QPH2 592 aa13.11□□□□□ -0.31
CALU-206ENST00000542996 CUL4AQ13619 759 aa13.11□□□□□ -0.31
CALU-206ENST00000542996 PI4KAP1Q8N8J0 262 aa13.11□□□□□ -0.31
CALU-206ENST00000542996 LSG1Q9H089 658 aaKnown RBP13.11□□□□□ -0.31
CALU-206ENST00000542996 NPHP4O75161 1426 aaPredicted RBP13.11□□□□□ -0.31
CALU-206ENST00000542996 TJP1Q07157 1748 aa13.11□□□□□ -0.31
CALU-206ENST00000542996 MAP3K5Q99683 1374 aa13.1□□□□□ -0.31
CALU-206ENST00000542996 HSCBQ8IWL3 235 aa13.1□□□□□ -0.31
CALU-206ENST00000542996 SPG7Q9UQ90 795 aa13.1□□□□□ -0.31
CALU-206ENST00000542996 DAXXQ9UER7 740 aaPredicted RBP13.1□□□□□ -0.31
CALU-206ENST00000542996 MEGF6O75095 1541 aa13.09□□□□□ -0.31
CALU-206ENST00000542996 SLC39A6Q13433 755 aa13.09□□□□□ -0.31
CALU-206ENST00000542996 ABTB2Q8N961 1025 aa13.09□□□□□ -0.31
CALU-206ENST00000542996 GNAT3A8MTJ3 354 aa13.09□□□□□ -0.31
CALU-206ENST00000542996 SLIT3O75094 1523 aa13.09□□□□□ -0.31
CALU-206ENST00000542996 GOLGA6L3A6NEY3 463 aa13.09□□□□□ -0.31
CALU-206ENST00000542996 BRD1O95696 1058 aa13.09□□□□□ -0.31
CALU-206ENST00000542996 CAVIN1Q6NZI2 390 aaKnown RBP13.09□□□□□ -0.31
CALU-206ENST00000542996 PDLIM2Q96JY6 352 aa13.09□□□□□ -0.31
CALU-206ENST00000542996 PRPF40AO75400 957 aaKnown RBP13.08□□□□□ -0.32
CALU-206ENST00000542996 FKBP5Q13451 457 aaPredicted RBP13.08□□□□□ -0.32
CALU-206ENST00000542996 DNAH12Q6ZR08 3092 aa13.08□□□□□ -0.32
CALU-206ENST00000542996 MX1P20591 662 aa13.08□□□□□ -0.32
CALU-206ENST00000542996 TAF7Q15545 349 aaPredicted RBP13.08□□□□□ -0.32
CALU-206ENST00000542996 FAM173BQ6P4H8 233 aa13.08□□□□□ -0.32
CALU-206ENST00000542996 CLCN1P35523 988 aa13.08□□□□□ -0.32
CALU-206ENST00000542996 CALD1Q05682 793 aaKnown RBP13.08□□□□□ -0.32
CALU-206ENST00000542996 FAM227BQ96M60 508 aa13.07□□□□□ -0.32
CALU-206ENST00000542996 TCEANC2Q96MN5 208 aa13.07□□□□□ -0.32
CALU-206ENST00000542996 SNX14Q9Y5W7 946 aa13.07□□□□□ -0.32
CALU-206ENST00000542996 EIF2S2P20042 333 aaKnown RBP13.07□□□□□ -0.32
CALU-206ENST00000542996 PPP1R9BQ96SB3 815 aa13.07□□□□□ -0.32
CALU-206ENST00000542996 ARFGEF2Q9Y6D5 1785 aa13.07□□□□□ -0.32
CALU-206ENST00000542996 NEK4P51957 841 aa13.07□□□□□ -0.32
CALU-206ENST00000542996 PALLDQ8WX93 1383 aa13.07□□□□□ -0.32
CALU-206ENST00000542996 KLHL40Q2TBA0 621 aa13.06□□□□□ -0.32
CALU-206ENST00000542996 C17orf53Q8N3J3 647 aaPredicted RBP13.06□□□□□ -0.32
CALU-206ENST00000542996 ZNF142P52746 1687 aaPredicted RBP13.06□□□□□ -0.32
CALU-206ENST00000542996 HSP90AB1P08238 724 aaKnown RBP13.06□□□□□ -0.32
CALU-206ENST00000542996 ZNF589Q86UQ0 364 aaPredicted RBP13.06□□□□□ -0.32
CALU-206ENST00000542996 NGDNQ8NEJ9 315 aaKnown RBP13.06□□□□□ -0.32
CALU-206ENST00000542996 TTC21AQ8NDW8 1320 aa13.06□□□□□ -0.32
CALU-206ENST00000542996 EAF2Q96CJ1 260 aaPredicted RBP13.06□□□□□ -0.32
CALU-206ENST00000542996 DDX60Q8IY21 1712 aaKnown RBP13.06□□□□□ -0.32
CALU-206ENST00000542996 CABLES1Q8TDN4 633 aa13.05□□□□□ -0.32
CALU-206ENST00000542996 TOGARAM1Q9Y4F4 1720 aa13.05□□□□□ -0.32
CALU-206ENST00000542996 GIGYF1O75420 1035 aaPredicted RBP13.05□□□□□ -0.32
CALU-206ENST00000542996 UPF2Q9HAU5 1272 aaKnown RBP13.05□□□□□ -0.32
CALU-206ENST00000542996 FOXP2O15409 715 aa13.05□□□□□ -0.32
CALU-206ENST00000542996 HSPA4P34932 840 aa13.05□□□□□ -0.32
CALU-206ENST00000542996 ARHGEF25Q86VW2 580 aa13.05□□□□□ -0.32
CALU-206ENST00000542996 AFDNP55196 1824 aaKnown RBP13.05□□□□□ -0.32
CALU-206ENST00000542996 AMPHP49418 695 aa13.05□□□□□ -0.32
CALU-206ENST00000542996 SUCLG2Q96I99 432 aa13.05□□□□□ -0.32
CALU-206ENST00000542996 PXDNLA1KZ92 1463 aa13.05□□□□□ -0.32
CALU-206ENST00000542996 NUP188Q5SRE5 1749 aa13.04□□□□□ -0.32
CALU-206ENST00000542996 ZNF445P59923 1031 aa13.04□□□□□ -0.32
CALU-206ENST00000542996 TSC1Q92574 1164 aa13.04□□□□□ -0.32
CALU-206ENST00000542996 SYCE3A1L190 88 aa13.04□□□□□ -0.32
CALU-206ENST00000542996 IP6K1Q92551 441 aa13.04□□□□□ -0.32
CALU-206ENST00000542996 SLIT2O94813 1529 aa13.04□□□□□ -0.32
CALU-206ENST00000542996 GNAI2P04899 355 aa13.04□□□□□ -0.32
CALU-206ENST00000542996 RHPN1Q8TCX5 695 aa13.04□□□□□ -0.32
CALU-206ENST00000542996 SGSM2O43147 1006 aa13.03□□□□□ -0.32
CALU-206ENST00000542996 PNNQ9H307 717 aaKnown RBP13.03□□□□□ -0.32
CALU-206ENST00000542996 ERC2O15083 957 aa13.03□□□□□ -0.32
CALU-206ENST00000542996 RILPL2Q969X0 211 aa13.03□□□□□ -0.32
CALU-206ENST00000542996 SEC62Q99442 399 aaKnown RBP13.03□□□□□ -0.32
CALU-206ENST00000542996 FUCA2Q9BTY2 467 aa13.03□□□□□ -0.32
CALU-206ENST00000542996 SRCIN1Q9C0H9 1055 aa13.03□□□□□ -0.32
CALU-206ENST00000542996 CIZ1Q9ULV3 898 aaPredicted RBP13.02□□□□□ -0.32
CALU-206ENST00000542996 MYH15Q9Y2K3 1946 aa13.02□□□□□ -0.32
CALU-206ENST00000542996 A0A087WWV3 80 aa13.02□□□□□ -0.32
CALU-206ENST00000542996 ESPNB1AK53 854 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 530.7 ms