RNA–Protein interactions for RNA: ENST00000542629.5

PPFIBP1-215, Transcript of PPFIA binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PPFIBP1, Length 3,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-215ENST00000542629 RIC3Q7Z5B4 369 aa16.47■□□□□ 0.23
PPFIBP1-215ENST00000542629 EIF5BO60841 1220 aaKnown RBP16.46■□□□□ 0.23
PPFIBP1-215ENST00000542629 GBP4Q96PP9 640 aa16.46■□□□□ 0.23
PPFIBP1-215ENST00000542629 CHMP4AQ9BY43 222 aa16.46■□□□□ 0.23
PPFIBP1-215ENST00000542629 OSBPL3Q9H4L5 887 aa16.46■□□□□ 0.23
PPFIBP1-215ENST00000542629 HOXB7P09629 217 aa16.45■□□□□ 0.22
PPFIBP1-215ENST00000542629 ESYT1Q9BSJ8 1104 aa16.45■□□□□ 0.22
PPFIBP1-215ENST00000542629 SIL1Q9H173 461 aa16.45■□□□□ 0.22
PPFIBP1-215ENST00000542629 ADCY9O60503 1353 aa16.45■□□□□ 0.22
PPFIBP1-215ENST00000542629 UPF3BQ9BZI7 483 aaKnown RBP16.45■□□□□ 0.22
PPFIBP1-215ENST00000542629 ADAMTSL3P82987 1691 aa16.44■□□□□ 0.22
PPFIBP1-215ENST00000542629 CHMLP26374 656 aa16.44■□□□□ 0.22
PPFIBP1-215ENST00000542629 ZNF790Q6PG37 636 aa16.44■□□□□ 0.22
PPFIBP1-215ENST00000542629 KSR2Q6VAB6 950 aa16.44■□□□□ 0.22
PPFIBP1-215ENST00000542629 ZGPATQ8N5A5 531 aaKnown RBP16.44■□□□□ 0.22
PPFIBP1-215ENST00000542629 KIF1BPQ96EK5 621 aa16.44■□□□□ 0.22
PPFIBP1-215ENST00000542629 DDX11L8A8MPP1 907 aa16.44■□□□□ 0.22
PPFIBP1-215ENST00000542629 TTC5Q8N0Z6 440 aa16.44■□□□□ 0.22
PPFIBP1-215ENST00000542629 ANO8Q9HCE9 1232 aaPredicted RBP16.44■□□□□ 0.22
PPFIBP1-215ENST00000542629 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.44■□□□□ 0.22
PPFIBP1-215ENST00000542629 PALD1Q9ULE6 856 aa16.44■□□□□ 0.22
PPFIBP1-215ENST00000542629 SPG7Q9UQ90 795 aa16.43■□□□□ 0.22
PPFIBP1-215ENST00000542629 LRRC37A3O60309 1634 aa16.43■□□□□ 0.22
PPFIBP1-215ENST00000542629 FAM208AQ9UK61 1670 aaKnown RBP16.43■□□□□ 0.22
PPFIBP1-215ENST00000542629 ZNF496Q96IT1 587 aaPredicted RBP16.43■□□□□ 0.22
PPFIBP1-215ENST00000542629 NPHP3Q7Z494 1330 aa16.43■□□□□ 0.22
PPFIBP1-215ENST00000542629 PKP1Q13835 747 aa16.43■□□□□ 0.22
PPFIBP1-215ENST00000542629 RAB3GAP1Q15042 981 aa16.43■□□□□ 0.22
PPFIBP1-215ENST00000542629 CADPS2Q86UW7 1296 aa16.43■□□□□ 0.22
PPFIBP1-215ENST00000542629 SALL3Q9BXA9 1300 aa16.42■□□□□ 0.22
PPFIBP1-215ENST00000542629 DDX58O95786 925 aaKnown RBP16.42■□□□□ 0.22
PPFIBP1-215ENST00000542629 MCCP23508 829 aa16.42■□□□□ 0.22
PPFIBP1-215ENST00000542629 IL25Q9H293 177 aa16.42■□□□□ 0.22
PPFIBP1-215ENST00000542629 ZNF142P52746 1687 aaPredicted RBP16.42■□□□□ 0.22
PPFIBP1-215ENST00000542629 DDIT3P35638 169 aa16.42■□□□□ 0.22
PPFIBP1-215ENST00000542629 KLHDC4Q8TBB5 520 aa16.42■□□□□ 0.22
PPFIBP1-215ENST00000542629 CIZ1Q9ULV3 898 aaPredicted RBP16.42■□□□□ 0.22
PPFIBP1-215ENST00000542629 NCLP19338 710 aaKnown RBP16.41■□□□□ 0.22
PPFIBP1-215ENST00000542629 COPS6Q7L5N1 327 aa16.41■□□□□ 0.22
PPFIBP1-215ENST00000542629 XAGE3Q8WTP9 111 aa16.41■□□□□ 0.22
PPFIBP1-215ENST00000542629 HYPKQ9NX55 129 aa16.41■□□□□ 0.22
PPFIBP1-215ENST00000542629 RAB11FIP3O75154 756 aa16.41■□□□□ 0.22
PPFIBP1-215ENST00000542629 PHKG2P15735 406 aa16.41■□□□□ 0.22
PPFIBP1-215ENST00000542629 CWC27Q6UX04 472 aaKnown RBP16.41■□□□□ 0.22
PPFIBP1-215ENST00000542629 CLASRPQ8N2M8 674 aaKnown RBP16.41■□□□□ 0.22
PPFIBP1-215ENST00000542629 SLC52A2Q9HAB3 445 aa16.41■□□□□ 0.22
PPFIBP1-215ENST00000542629 PRDM11Q9NQV5 511 aa16.41■□□□□ 0.22
PPFIBP1-215ENST00000542629 USP16Q9Y5T5 823 aa16.41■□□□□ 0.22
PPFIBP1-215ENST00000542629 GOLGA6L3A6NEY3 463 aa16.41■□□□□ 0.22
PPFIBP1-215ENST00000542629 POLA2Q14181 598 aa16.41■□□□□ 0.22
PPFIBP1-215ENST00000542629 IFNL2Q8IZJ0 200 aa16.41■□□□□ 0.22
PPFIBP1-215ENST00000542629 MYD88Q99836 296 aa16.4■□□□□ 0.22
PPFIBP1-215ENST00000542629 DDX21Q9NR30 783 aaKnown RBP eCLIP16.4■□□□□ 0.22
PPFIBP1-215ENST00000542629 NCOA3Q9Y6Q9 1424 aa16.4■□□□□ 0.22
PPFIBP1-215ENST00000542629 IFIT2P09913 472 aaKnown RBP16.4■□□□□ 0.22
PPFIBP1-215ENST00000542629 SUCLG2Q96I99 432 aa16.4■□□□□ 0.22
PPFIBP1-215ENST00000542629 NEXNQ0ZGT2 675 aa16.4■□□□□ 0.22
PPFIBP1-215ENST00000542629 FOXD4L6Q3SYB3 417 aaPredicted RBP16.4■□□□□ 0.22
PPFIBP1-215ENST00000542629 FOXD4L3Q6VB84 417 aaPredicted RBP16.4■□□□□ 0.22
PPFIBP1-215ENST00000542629 TOM1L2Q6ZVM7 507 aa16.4■□□□□ 0.22
PPFIBP1-215ENST00000542629 CHAMP1Q96JM3 812 aa16.4■□□□□ 0.22
PPFIBP1-215ENST00000542629 STRN4Q9NRL3 753 aa16.4■□□□□ 0.22
PPFIBP1-215ENST00000542629 GRM8O00222 908 aa16.39■□□□□ 0.21
PPFIBP1-215ENST00000542629 CABP4P57796 275 aa16.39■□□□□ 0.21
PPFIBP1-215ENST00000542629 MCTP1Q6DN14 999 aa16.39■□□□□ 0.21
PPFIBP1-215ENST00000542629 LARP6Q9BRS8 491 aaKnown RBP16.39■□□□□ 0.21
PPFIBP1-215ENST00000542629 BICC1Q9H694 974 aaKnown RBP16.39■□□□□ 0.21
PPFIBP1-215ENST00000542629 CCDC9Q9Y3X0 531 aaKnown RBP16.39■□□□□ 0.21
PPFIBP1-215ENST00000542629 ATP5J2-PTCD1G3V325 749 aa16.39■□□□□ 0.21
PPFIBP1-215ENST00000542629 GOLGA6L22H0YM25 854 aa16.39■□□□□ 0.21
PPFIBP1-215ENST00000542629 CYP27B1O15528 508 aa16.39■□□□□ 0.21
PPFIBP1-215ENST00000542629 PTCD1O75127 700 aaKnown RBP16.39■□□□□ 0.21
PPFIBP1-215ENST00000542629 AACSQ86V21 672 aa16.39■□□□□ 0.21
PPFIBP1-215ENST00000542629 STAP2Q9UGK3 403 aa16.39■□□□□ 0.21
PPFIBP1-215ENST00000542629 ZNF330Q9Y3S2 320 aaPredicted RBP16.39■□□□□ 0.21
PPFIBP1-215ENST00000542629 HSP90AB4PQ58FF6 505 aa16.38■□□□□ 0.21
PPFIBP1-215ENST00000542629 LINS1Q8NG48 757 aa16.38■□□□□ 0.21
PPFIBP1-215ENST00000542629 CCDC8Q9H0W5 538 aaPredicted RBP16.38■□□□□ 0.21
PPFIBP1-215ENST00000542629 DDX54Q8TDD1 881 aaKnown RBP16.38■□□□□ 0.21
PPFIBP1-215ENST00000542629 AK9Q5TCS8 1911 aa16.38■□□□□ 0.21
PPFIBP1-215ENST00000542629 CNTROBQ8N137 903 aa16.38■□□□□ 0.21
PPFIBP1-215ENST00000542629 MST1RQ04912 1400 aa16.37■□□□□ 0.21
PPFIBP1-215ENST00000542629 G3BP1Q13283 466 aaKnown RBP eCLIP16.37■□□□□ 0.21
PPFIBP1-215ENST00000542629 KIAA1211Q6ZU35 1233 aa16.37■□□□□ 0.21
PPFIBP1-215ENST00000542629 PI4K2BQ8TCG2 481 aa16.37■□□□□ 0.21
PPFIBP1-215ENST00000542629 ALDH1L1O75891 902 aa16.37■□□□□ 0.21
PPFIBP1-215ENST00000542629 TPRNQ4KMQ1 711 aa16.37■□□□□ 0.21
PPFIBP1-215ENST00000542629 PXDNLA1KZ92 1463 aa16.37■□□□□ 0.21
PPFIBP1-215ENST00000542629 PANK2Q9BZ23 570 aa16.36■□□□□ 0.21
PPFIBP1-215ENST00000542629 DIAPH3Q9NSV4 1193 aa16.36■□□□□ 0.21
PPFIBP1-215ENST00000542629 DTNBO60941 627 aa16.36■□□□□ 0.21
PPFIBP1-215ENST00000542629 PDIA6Q15084 440 aa16.36■□□□□ 0.21
PPFIBP1-215ENST00000542629 L1TD1Q5T7N2 865 aaKnown RBP16.36■□□□□ 0.21
PPFIBP1-215ENST00000542629 TMX3Q96JJ7 454 aa16.36■□□□□ 0.21
PPFIBP1-215ENST00000542629 CHMP3Q9Y3E7 222 aa16.36■□□□□ 0.21
PPFIBP1-215ENST00000542629 DDX49Q9Y6V7 483 aaKnown RBP16.36■□□□□ 0.21
PPFIBP1-215ENST00000542629 SLIT3O75094 1523 aa16.36■□□□□ 0.21
PPFIBP1-215ENST00000542629 BAG4O95429 457 aaKnown RBP16.36■□□□□ 0.21
PPFIBP1-215ENST00000542629 MEGF6O75095 1541 aa16.36■□□□□ 0.21
PPFIBP1-215ENST00000542629 NCAPD2Q15021 1401 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms