RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 NPM2Q86SE8 214 aaKnown RBP26.91■■□□□ 1.9
DDB1-220ENST00000542337 HEG1Q9ULI3 1381 aa26.91■■□□□ 1.9
DDB1-220ENST00000542337 C10orf71Q711Q0 1435 aa26.9■■□□□ 1.9
DDB1-220ENST00000542337 COL15A1P39059 1388 aa26.9■■□□□ 1.9
DDB1-220ENST00000542337 HTATSF1O43719 755 aaKnown RBP26.9■■□□□ 1.9
DDB1-220ENST00000542337 TM4SF1P30408 202 aa26.89■■□□□ 1.9
DDB1-220ENST00000542337 PNNQ9H307 717 aaKnown RBP26.89■■□□□ 1.9
DDB1-220ENST00000542337 DPEP1P16444 411 aa26.88■■□□□ 1.89
DDB1-220ENST00000542337 BCS1LQ9Y276 419 aa26.88■■□□□ 1.89
DDB1-220ENST00000542337 C4AP0C0L4 1744 aa26.87■■□□□ 1.89
DDB1-220ENST00000542337 PXDNLA1KZ92 1463 aa26.87■■□□□ 1.89
DDB1-220ENST00000542337 DDR1Q08345 913 aa26.87■■□□□ 1.89
DDB1-220ENST00000542337 MCM10Q7L590 875 aa26.87■■□□□ 1.89
DDB1-220ENST00000542337 VIRMAQ69YN4 1812 aaKnown RBP26.86■■□□□ 1.89
DDB1-220ENST00000542337 POLRMTO00411 1230 aaKnown RBP26.85■■□□□ 1.89
DDB1-220ENST00000542337 EIF5P55010 431 aaKnown RBP26.85■■□□□ 1.89
DDB1-220ENST00000542337 RALBP1Q15311 655 aa26.85■■□□□ 1.89
DDB1-220ENST00000542337 GIGYF1O75420 1035 aaPredicted RBP26.84■■□□□ 1.89
DDB1-220ENST00000542337 ZNF330Q9Y3S2 320 aaPredicted RBP26.84■■□□□ 1.89
DDB1-220ENST00000542337 NFIXQ14938 502 aa26.83■■□□□ 1.89
DDB1-220ENST00000542337 PIM2Q9P1W9 311 aa26.83■■□□□ 1.89
DDB1-220ENST00000542337 KCNQ3O43525 872 aa26.82■■□□□ 1.88
DDB1-220ENST00000542337 IL6STP40189 918 aaPredicted RBP26.82■■□□□ 1.88
DDB1-220ENST00000542337 UBR2Q8IWV8 1755 aa26.81■■□□□ 1.88
DDB1-220ENST00000542337 DDX10Q13206 875 aaKnown RBP26.81■■□□□ 1.88
DDB1-220ENST00000542337 DCTN1Q14203 1278 aa26.81■■□□□ 1.88
DDB1-220ENST00000542337 ARHGAP27Q6ZUM4 889 aa26.81■■□□□ 1.88
DDB1-220ENST00000542337 SNRPA1P09661 255 aaKnown RBP26.8■■□□□ 1.88
DDB1-220ENST00000542337 TAF7Q15545 349 aaPredicted RBP26.8■■□□□ 1.88
DDB1-220ENST00000542337 KIF13BQ9NQT8 1826 aa26.8■■□□□ 1.88
DDB1-220ENST00000542337 MAPK8IP3Q9UPT6 1336 aa26.8■■□□□ 1.88
DDB1-220ENST00000542337 A1BGP04217 495 aa26.79■■□□□ 1.88
DDB1-220ENST00000542337 SERPINB2P05120 415 aa26.79■■□□□ 1.88
DDB1-220ENST00000542337 DALRD3Q5D0E6 543 aaKnown RBP26.79■■□□□ 1.88
DDB1-220ENST00000542337 KCNA3P22001 575 aa26.78■■□□□ 1.88
DDB1-220ENST00000542337 C1QTNF8P60827 252 aa26.78■■□□□ 1.88
DDB1-220ENST00000542337 BCL2L12Q9HB09 334 aa26.78■■□□□ 1.88
DDB1-220ENST00000542337 ATP10DQ9P241 1426 aa26.78■■□□□ 1.88
DDB1-220ENST00000542337 BICDL1Q6ZP65 573 aa26.77■■□□□ 1.88
DDB1-220ENST00000542337 PNISRQ8TF01 805 aaKnown RBP26.77■■□□□ 1.88
DDB1-220ENST00000542337 GPBP1L1Q9HC44 474 aaPredicted RBP26.77■■□□□ 1.88
DDB1-220ENST00000542337 TBC1D2BQ9UPU7 963 aa26.77■■□□□ 1.88
DDB1-220ENST00000542337 SIPA1L3O60292 1781 aaPredicted RBP26.76■■□□□ 1.88
DDB1-220ENST00000542337 NFE2L2Q16236 605 aa26.76■■□□□ 1.87
DDB1-220ENST00000542337 PLEKHF1Q96S99 279 aa26.76■■□□□ 1.87
DDB1-220ENST00000542337 USP16Q9Y5T5 823 aa26.76■■□□□ 1.87
DDB1-220ENST00000542337 CHRNA5P30532 468 aa26.75■■□□□ 1.87
DDB1-220ENST00000542337 N4BP2Q86UW6 1770 aaPredicted RBP26.74■■□□□ 1.87
DDB1-220ENST00000542337 ZNF526Q8TF50 670 aaPredicted RBP26.73■■□□□ 1.87
DDB1-220ENST00000542337 TBC1D9BQ66K14 1250 aa26.72■■□□□ 1.87
DDB1-220ENST00000542337 DZIP3Q86Y13 1208 aaKnown RBP26.72■■□□□ 1.87
DDB1-220ENST00000542337 ADCY9O60503 1353 aa26.71■■□□□ 1.87
DDB1-220ENST00000542337 NPHP1O15259 732 aa26.71■■□□□ 1.87
DDB1-220ENST00000542337 SETDB2Q96T68 719 aa26.71■■□□□ 1.87
DDB1-220ENST00000542337 MIS18AQ9NYP9 233 aa26.71■■□□□ 1.87
DDB1-220ENST00000542337 KIAA1551Q9HCM1 1747 aa26.7■■□□□ 1.87
DDB1-220ENST00000542337 H0YIN7 160 aa26.7■■□□□ 1.86
DDB1-220ENST00000542337 MYBBP1AQ9BQG0 1328 aaKnown RBP26.69■■□□□ 1.86
DDB1-220ENST00000542337 PRAMEF22A3QJZ6 481 aa26.69■■□□□ 1.86
DDB1-220ENST00000542337 CAMTA2O94983 1202 aa26.68■■□□□ 1.86
DDB1-220ENST00000542337 C2CD5Q86YS7 1000 aa26.68■■□□□ 1.86
DDB1-220ENST00000542337 PDZRN3Q9UPQ7 1066 aa26.68■■□□□ 1.86
DDB1-220ENST00000542337 ZNF652Q9Y2D9 606 aa26.68■■□□□ 1.86
DDB1-220ENST00000542337 PIP4K2AP48426 406 aaPredicted RBP26.67■■□□□ 1.86
DDB1-220ENST00000542337 CARMIL3Q8ND23 1372 aa26.67■■□□□ 1.86
DDB1-220ENST00000542337 SENP3-EIF4A1A0A087X0R7 540 aa26.66■■□□□ 1.86
DDB1-220ENST00000542337 PDE6BP35913 854 aa26.66■■□□□ 1.86
DDB1-220ENST00000542337 CLEC4GQ6UXB4 293 aa26.66■■□□□ 1.86
DDB1-220ENST00000542337 TTLL6Q8N841 843 aa26.66■■□□□ 1.86
DDB1-220ENST00000542337 BRIP1Q9BX63 1249 aa26.65■■□□□ 1.86
DDB1-220ENST00000542337 RIPK4P57078 832 aa26.64■■□□□ 1.86
DDB1-220ENST00000542337 LMOD3Q0VAK6 560 aa26.64■■□□□ 1.86
DDB1-220ENST00000542337 C9orf131Q5VYM1 1079 aa26.64■■□□□ 1.86
DDB1-220ENST00000542337 THUMPD2Q9BTF0 503 aaKnown RBP26.64■■□□□ 1.86
DDB1-220ENST00000542337 ST5P78524 1137 aa26.63■■□□□ 1.85
DDB1-220ENST00000542337 WDR43Q15061 677 aaKnown RBP eCLIP26.63■■□□□ 1.85
DDB1-220ENST00000542337 CNBD1Q8NA66 436 aa26.63■■□□□ 1.85
DDB1-220ENST00000542337 PRR5LQ6MZQ0 368 aa26.62■■□□□ 1.85
DDB1-220ENST00000542337 NBPF26B4DH59 902 aa26.61■■□□□ 1.85
DDB1-220ENST00000542337 EIF4A1P60842 406 aaKnown RBP26.61■■□□□ 1.85
DDB1-220ENST00000542337 NBPF10Q6P3W6 841 aaKnown RBP26.61■■□□□ 1.85
DDB1-220ENST00000542337 NBPF15Q8N660 670 aa26.61■■□□□ 1.85
DDB1-220ENST00000542337 ZNF622Q969S3 477 aaKnown RBP eCLIP26.61■■□□□ 1.85
DDB1-220ENST00000542337 NRXN2Q9P2S2 1712 aa26.6■■□□□ 1.85
DDB1-220ENST00000542337 RGL2O15211 777 aa26.6■■□□□ 1.85
DDB1-220ENST00000542337 BRCA1P38398 1863 aaKnown RBP26.59■■□□□ 1.85
DDB1-220ENST00000542337 NBPF5PQ86XG9 351 aaPredicted RBP26.59■■□□□ 1.85
DDB1-220ENST00000542337 RNF181Q9P0P0 153 aa26.59■■□□□ 1.85
DDB1-220ENST00000542337 TSPYL4Q9UJ04 414 aa26.59■■□□□ 1.85
DDB1-220ENST00000542337 AFDNP55196 1824 aaKnown RBP26.59■■□□□ 1.85
DDB1-220ENST00000542337 SCN7AQ01118 1682 aa26.58■■□□□ 1.85
DDB1-220ENST00000542337 TMPOP42166 694 aaKnown RBP26.58■■□□□ 1.85
DDB1-220ENST00000542337 CCDC24Q8N4L8 307 aa26.58■■□□□ 1.85
DDB1-220ENST00000542337 BABAM1Q9NWV8 329 aa26.57■■□□□ 1.84
DDB1-220ENST00000542337 ARFGEF1Q9Y6D6 1849 aa26.57■■□□□ 1.84
DDB1-220ENST00000542337 TPTE2Q6XPS3 522 aa26.56■■□□□ 1.84
DDB1-220ENST00000542337 NGEFQ8N5V2 710 aa26.56■■□□□ 1.84
DDB1-220ENST00000542337 NIP7Q9Y221 180 aaKnown RBP eCLIP26.56■■□□□ 1.84
DDB1-220ENST00000542337 RRP7AQ9Y3A4 280 aaKnown RBP26.56■■□□□ 1.84
DDB1-220ENST00000542337 CCDC146Q8IYE0 955 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms