RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 ERICH6Q7L0X2 663 aa21.51■■□□□ 1.03
TMEM50B-210ENST00000542230 TTC5Q8N0Z6 440 aa21.51■■□□□ 1.03
TMEM50B-210ENST00000542230 DDX21Q9NR30 783 aaKnown RBP eCLIP21.51■■□□□ 1.03
TMEM50B-210ENST00000542230 MRC1P22897 1456 aa21.5■■□□□ 1.03
TMEM50B-210ENST00000542230 PXDNLA1KZ92 1463 aa21.5■■□□□ 1.03
TMEM50B-210ENST00000542230 HSP90AB1P08238 724 aaKnown RBP21.5■■□□□ 1.03
TMEM50B-210ENST00000542230 ATP8B2P98198 1209 aa21.5■■□□□ 1.03
TMEM50B-210ENST00000542230 GSPT1P15170 499 aaKnown RBP21.49■■□□□ 1.03
TMEM50B-210ENST00000542230 MFAP1P55081 439 aaKnown RBP21.49■■□□□ 1.03
TMEM50B-210ENST00000542230 PIP4K2BP78356 416 aa21.49■■□□□ 1.03
TMEM50B-210ENST00000542230 KSR2Q6VAB6 950 aa21.48■■□□□ 1.03
TMEM50B-210ENST00000542230 ANP32EQ9BTT0 268 aa21.48■■□□□ 1.03
TMEM50B-210ENST00000542230 ADAMTS2O95450 1211 aa21.48■■□□□ 1.03
TMEM50B-210ENST00000542230 BMP2KLQ5H9B9 411 aa21.48■■□□□ 1.03
TMEM50B-210ENST00000542230 HYPKQ9NX55 129 aa21.48■■□□□ 1.03
TMEM50B-210ENST00000542230 PARP4Q9UKK3 1724 aaKnown RBP21.48■■□□□ 1.03
TMEM50B-210ENST00000542230 HMMRO75330 724 aa21.47■■□□□ 1.03
TMEM50B-210ENST00000542230 SNRPA1P09661 255 aaKnown RBP21.47■■□□□ 1.03
TMEM50B-210ENST00000542230 XAGE3Q8WTP9 111 aa21.47■■□□□ 1.03
TMEM50B-210ENST00000542230 FMNL2Q96PY5 1086 aa21.47■■□□□ 1.03
TMEM50B-210ENST00000542230 N4BP2Q86UW6 1770 aaPredicted RBP21.47■■□□□ 1.03
TMEM50B-210ENST00000542230 LRP10Q7Z4F1 713 aa21.46■■□□□ 1.03
TMEM50B-210ENST00000542230 SHANK3Q9BYB0 1731 aa21.46■■□□□ 1.03
TMEM50B-210ENST00000542230 PTCD1O75127 700 aaKnown RBP21.46■■□□□ 1.03
TMEM50B-210ENST00000542230 TSHZ3Q63HK5 1081 aa21.46■■□□□ 1.03
TMEM50B-210ENST00000542230 COPS6Q7L5N1 327 aa21.46■■□□□ 1.03
TMEM50B-210ENST00000542230 PPP1R42Q7Z4L9 355 aa21.46■■□□□ 1.03
TMEM50B-210ENST00000542230 CHMP4AQ9BY43 222 aa21.46■■□□□ 1.03
TMEM50B-210ENST00000542230 NKX1-1Q15270 411 aaPredicted RBP21.45■■□□□ 1.02
TMEM50B-210ENST00000542230 TBC1D32Q96NH3 1257 aa21.45■■□□□ 1.02
TMEM50B-210ENST00000542230 PLEKHG2Q9H7P9 1386 aa21.45■■□□□ 1.02
TMEM50B-210ENST00000542230 AHDC1Q5TGY3 1603 aaPredicted RBP21.44■■□□□ 1.02
TMEM50B-210ENST00000542230 GLI3P10071 1580 aa21.43■■□□□ 1.02
TMEM50B-210ENST00000542230 ERVV-2B6SEH9 535 aa21.43■■□□□ 1.02
TMEM50B-210ENST00000542230 IGKV5-2P06315 115 aa21.43■■□□□ 1.02
TMEM50B-210ENST00000542230 COL16A1Q07092 1604 aaPredicted RBP21.42■■□□□ 1.02
TMEM50B-210ENST00000542230 NUTM2BA6NNL0 878 aaPredicted RBP21.41■■□□□ 1.02
TMEM50B-210ENST00000542230 NUTM2EB1AL46 878 aaPredicted RBP21.41■■□□□ 1.02
TMEM50B-210ENST00000542230 SRGAP3O43295 1099 aa21.41■■□□□ 1.02
TMEM50B-210ENST00000542230 TBC1D9Q6ZT07 1266 aa21.41■■□□□ 1.02
TMEM50B-210ENST00000542230 RIC3Q7Z5B4 369 aa21.41■■□□□ 1.02
TMEM50B-210ENST00000542230 NUTM2AQ8IVF1 878 aaPredicted RBP21.41■■□□□ 1.02
TMEM50B-210ENST00000542230 SSH3Q8TE77 659 aa21.41■■□□□ 1.02
TMEM50B-210ENST00000542230 DDRGK1Q96HY6 314 aa21.41■■□□□ 1.02
TMEM50B-210ENST00000542230 NBPF26B4DH59 902 aa21.41■■□□□ 1.02
TMEM50B-210ENST00000542230 TTC22Q5TAA0 569 aa21.41■■□□□ 1.02
TMEM50B-210ENST00000542230 NBPF14Q5TI25 921 aa21.41■■□□□ 1.02
TMEM50B-210ENST00000542230 NBPF10Q6P3W6 841 aaKnown RBP21.41■■□□□ 1.02
TMEM50B-210ENST00000542230 NBPF15Q8N660 670 aa21.41■■□□□ 1.02
TMEM50B-210ENST00000542230 JARID2Q92833 1246 aaPredicted RBP21.41■■□□□ 1.02
TMEM50B-210ENST00000542230 C9orf78Q9NZ63 289 aaPredicted RBP21.41■■□□□ 1.02
TMEM50B-210ENST00000542230 KAT6BQ8WYB5 2073 aa21.41■■□□□ 1.02
TMEM50B-210ENST00000542230 IL1RAPL2Q9NP60 686 aa21.4■■□□□ 1.02
TMEM50B-210ENST00000542230 A1BGP04217 495 aa21.39■■□□□ 1.02
TMEM50B-210ENST00000542230 KAZALD1Q96I82 304 aa21.39■■□□□ 1.02
TMEM50B-210ENST00000542230 UPF2Q9HAU5 1272 aaKnown RBP21.39■■□□□ 1.02
TMEM50B-210ENST00000542230 IBTKQ9P2D0 1353 aaPredicted RBP21.39■■□□□ 1.01
TMEM50B-210ENST00000542230 POLA2Q14181 598 aa21.39■■□□□ 1.01
TMEM50B-210ENST00000542230 TOGARAM1Q9Y4F4 1720 aa21.38■■□□□ 1.01
TMEM50B-210ENST00000542230 LINS1Q8NG48 757 aa21.38■■□□□ 1.01
TMEM50B-210ENST00000542230 MYD88Q99836 296 aa21.38■■□□□ 1.01
TMEM50B-210ENST00000542230 C22orf23Q9BZE7 217 aa21.38■■□□□ 1.01
TMEM50B-210ENST00000542230 LRRCC1Q9C099 1032 aa21.38■■□□□ 1.01
TMEM50B-210ENST00000542230 ASAP1Q9ULH1 1129 aa21.38■■□□□ 1.01
TMEM50B-210ENST00000542230 SURF6O75683 361 aaKnown RBP21.38■■□□□ 1.01
TMEM50B-210ENST00000542230 ALDH1L1O75891 902 aa21.38■■□□□ 1.01
TMEM50B-210ENST00000542230 DDX58O95786 925 aaKnown RBP21.38■■□□□ 1.01
TMEM50B-210ENST00000542230 PIGBQ92521 554 aa21.38■■□□□ 1.01
TMEM50B-210ENST00000542230 ANKRD13DQ6ZTN6 518 aa21.37■■□□□ 1.01
TMEM50B-210ENST00000542230 COL14A1Q05707 1796 aaKnown RBP21.37■■□□□ 1.01
TMEM50B-210ENST00000542230 SDSP20132 328 aa21.37■■□□□ 1.01
TMEM50B-210ENST00000542230 PDE1AP54750 535 aa21.37■■□□□ 1.01
TMEM50B-210ENST00000542230 SUCLG2Q96I99 432 aa21.37■■□□□ 1.01
TMEM50B-210ENST00000542230 KCPQ6ZWJ8 1503 aa21.36■■□□□ 1.01
TMEM50B-210ENST00000542230 ATP5J2-PTCD1G3V325 749 aa21.36■■□□□ 1.01
TMEM50B-210ENST00000542230 GRM8O00222 908 aa21.36■■□□□ 1.01
TMEM50B-210ENST00000542230 PHLPP1O60346 1717 aa21.36■■□□□ 1.01
TMEM50B-210ENST00000542230 COL22A1Q8NFW1 1626 aaPredicted RBP21.36■■□□□ 1.01
TMEM50B-210ENST00000542230 TMOD3Q9NYL9 352 aa21.36■■□□□ 1.01
TMEM50B-210ENST00000542230 PA2G4Q9UQ80 394 aaKnown RBP21.36■■□□□ 1.01
TMEM50B-210ENST00000542230 DISP2A7MBM2 1401 aa21.35■■□□□ 1.01
TMEM50B-210ENST00000542230 SALL3Q9BXA9 1300 aa21.35■■□□□ 1.01
TMEM50B-210ENST00000542230 NEURL1BA8MQ27 555 aa21.35■■□□□ 1.01
TMEM50B-210ENST00000542230 TTLL7Q6ZT98 887 aa21.35■■□□□ 1.01
TMEM50B-210ENST00000542230 METTL22Q9BUU2 404 aaPredicted RBP21.34■■□□□ 1.01
TMEM50B-210ENST00000542230 NUTM1Q86Y26 1132 aa21.33■■□□□ 1.01
TMEM50B-210ENST00000542230 BICC1Q9H694 974 aaKnown RBP21.33■■□□□ 1.01
TMEM50B-210ENST00000542230 EPHA10Q5JZY3 1008 aa21.33■■□□□ 1
TMEM50B-210ENST00000542230 GCKRQ14397 625 aa21.32■■□□□ 1
TMEM50B-210ENST00000542230 NBR1Q14596 966 aa21.32■■□□□ 1
TMEM50B-210ENST00000542230 CDC45O75419 566 aa21.32■■□□□ 1
TMEM50B-210ENST00000542230 UBR2Q8IWV8 1755 aa21.32■■□□□ 1
TMEM50B-210ENST00000542230 ATG3Q9NT62 314 aa21.31■■□□□ 1
TMEM50B-210ENST00000542230 TNS2Q63HR2 1409 aa21.31■■□□□ 1
TMEM50B-210ENST00000542230 TOM1O60784 492 aa21.31■■□□□ 1
TMEM50B-210ENST00000542230 RHPN1Q8TCX5 695 aa21.31■■□□□ 1
TMEM50B-210ENST00000542230 SYTL4Q96C24 671 aaPredicted RBP21.31■■□□□ 1
TMEM50B-210ENST00000542230 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.31■■□□□ 1
TMEM50B-210ENST00000542230 EXOC5O00471 708 aa21.3■■□□□ 1
TMEM50B-210ENST00000542230 MX1P20591 662 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms