RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 FKBP8Q14318 412 aa18.81■□□□□ 0.6
LTBR-209ENST00000541102 TEX13AQ9BXU3 409 aaPredicted RBP18.81■□□□□ 0.6
LTBR-209ENST00000541102 WWC3Q9ULE0 1092 aa18.81■□□□□ 0.6
LTBR-209ENST00000541102 PARP3Q9Y6F1 533 aa18.81■□□□□ 0.6
LTBR-209ENST00000541102 USP42Q9H9J4 1324 aaKnown RBP18.8■□□□□ 0.6
LTBR-209ENST00000541102 MAPK8IP3Q9UPT6 1336 aa18.8■□□□□ 0.6
LTBR-209ENST00000541102 MIER1Q8N108 512 aa18.8■□□□□ 0.6
LTBR-209ENST00000541102 YBX3P16989 372 aaKnown RBP eCLIP18.79■□□□□ 0.68e-11■■□□□ 12.4
LTBR-209ENST00000541102 NFE2L2Q16236 605 aa18.79■□□□□ 0.6
LTBR-209ENST00000541102 USPL1Q5W0Q7 1092 aa18.79■□□□□ 0.6
LTBR-209ENST00000541102 MRS2Q9HD23 443 aa18.79■□□□□ 0.6
LTBR-209ENST00000541102 MIS18AQ9NYP9 233 aa18.79■□□□□ 0.6
LTBR-209ENST00000541102 ADAMTS8Q9UP79 889 aa18.79■□□□□ 0.6
LTBR-209ENST00000541102 SIPA1L3O60292 1781 aaPredicted RBP18.78■□□□□ 0.6
LTBR-209ENST00000541102 CICQ96RK0 1608 aaPredicted RBP18.78■□□□□ 0.6
LTBR-209ENST00000541102 TAF7Q15545 349 aaPredicted RBP18.78■□□□□ 0.6
LTBR-209ENST00000541102 ZNF330Q9Y3S2 320 aaPredicted RBP18.78■□□□□ 0.6
LTBR-209ENST00000541102 UBR2Q8IWV8 1755 aa18.78■□□□□ 0.6
LTBR-209ENST00000541102 GRIN3BO60391 1043 aa18.77■□□□□ 0.6
LTBR-209ENST00000541102 NARFQ9UHQ1 456 aa18.77■□□□□ 0.6
LTBR-209ENST00000541102 COL15A1P39059 1388 aa18.77■□□□□ 0.6
LTBR-209ENST00000541102 A1BGP04217 495 aa18.76■□□□□ 0.59
LTBR-209ENST00000541102 PNISRQ8TF01 805 aaKnown RBP18.76■□□□□ 0.59
LTBR-209ENST00000541102 THUMPD2Q9BTF0 503 aaKnown RBP18.76■□□□□ 0.59
LTBR-209ENST00000541102 C4AP0C0L4 1744 aa18.76■□□□□ 0.59
LTBR-209ENST00000541102 A0A087WZG4 1122 aa18.75■□□□□ 0.59
LTBR-209ENST00000541102 PRAMEF22A3QJZ6 481 aa18.75■□□□□ 0.59
LTBR-209ENST00000541102 EIF5P55010 431 aaKnown RBP18.75■□□□□ 0.59
LTBR-209ENST00000541102 DDR1Q08345 913 aa18.75■□□□□ 0.59
LTBR-209ENST00000541102 CCDC146Q8IYE0 955 aa18.75■□□□□ 0.59
LTBR-209ENST00000541102 USP16Q9Y5T5 823 aa18.75■□□□□ 0.59
LTBR-209ENST00000541102 A0A0G2JLW4 131 aa18.74■□□□□ 0.59
LTBR-209ENST00000541102 SNRPA1P09661 255 aaKnown RBP18.74■□□□□ 0.59
LTBR-209ENST00000541102 WDR43Q15061 677 aaKnown RBP eCLIP18.74■□□□□ 0.59
LTBR-209ENST00000541102 TM4SF1P30408 202 aa18.73■□□□□ 0.59
LTBR-209ENST00000541102 PIP4K2AP48426 406 aaPredicted RBP18.73■□□□□ 0.59
LTBR-209ENST00000541102 RIPK4P57078 832 aa18.73■□□□□ 0.59
LTBR-209ENST00000541102 NPM2Q86SE8 214 aaKnown RBP18.73■□□□□ 0.59
LTBR-209ENST00000541102 TBC1D2BQ9UPU7 963 aa18.73■□□□□ 0.59
LTBR-209ENST00000541102 IL6STP40189 918 aaPredicted RBP18.72■□□□□ 0.59
LTBR-209ENST00000541102 TGFB2P61812 414 aa18.72■□□□□ 0.59
LTBR-209ENST00000541102 NFIXQ14938 502 aa18.72■□□□□ 0.59
LTBR-209ENST00000541102 BICDL1Q6ZP65 573 aa18.72■□□□□ 0.59
LTBR-209ENST00000541102 BCL2L12Q9HB09 334 aa18.72■□□□□ 0.59
LTBR-209ENST00000541102 RRP7AQ9Y3A4 280 aaKnown RBP18.72■□□□□ 0.59
LTBR-209ENST00000541102 DLG5Q8TDM6 1919 aa18.71■□□□□ 0.59
LTBR-209ENST00000541102 POLRMTO00411 1230 aaKnown RBP18.71■□□□□ 0.59
LTBR-209ENST00000541102 DPEP1P16444 411 aa18.71■□□□□ 0.59
LTBR-209ENST00000541102 NEUROD2Q15784 382 aa18.71■□□□□ 0.59
LTBR-209ENST00000541102 SENP3-EIF4A1A0A087X0R7 540 aa18.7■□□□□ 0.58
LTBR-209ENST00000541102 TMPOP42166 694 aaKnown RBP18.7■□□□□ 0.58
LTBR-209ENST00000541102 C10orf71Q711Q0 1435 aa18.7■□□□□ 0.58
LTBR-209ENST00000541102 CHD4Q14839 1912 aa18.7■□□□□ 0.58
LTBR-209ENST00000541102 SERPINB2P05120 415 aa18.68■□□□□ 0.58
LTBR-209ENST00000541102 ZNF784Q8NCA9 323 aaPredicted RBP18.68■□□□□ 0.58
LTBR-209ENST00000541102 RUNDC1Q96C34 613 aa18.68■□□□□ 0.58
LTBR-209ENST00000541102 BCS1LQ9Y276 419 aa18.68■□□□□ 0.58
LTBR-209ENST00000541102 PXDNLA1KZ92 1463 aa18.68■□□□□ 0.58
LTBR-209ENST00000541102 CCER2I3L3R5 266 aa18.67■□□□□ 0.58
LTBR-209ENST00000541102 FAM9BQ8IZU0 186 aa18.67■□□□□ 0.58
LTBR-209ENST00000541102 NBPF26B4DH59 902 aa18.66■□□□□ 0.58
LTBR-209ENST00000541102 CHRNA5P30532 468 aa18.66■□□□□ 0.58
LTBR-209ENST00000541102 EIF4A1P60842 406 aaKnown RBP18.66■□□□□ 0.58
LTBR-209ENST00000541102 TBC1D9BQ66K14 1250 aa18.66■□□□□ 0.58
LTBR-209ENST00000541102 NBPF10Q6P3W6 841 aaKnown RBP18.66■□□□□ 0.58
LTBR-209ENST00000541102 DZIP3Q86Y13 1208 aaKnown RBP18.66■□□□□ 0.58
LTBR-209ENST00000541102 NBPF15Q8N660 670 aa18.66■□□□□ 0.58
LTBR-209ENST00000541102 N4BP2Q86UW6 1770 aaPredicted RBP18.65■□□□□ 0.58
LTBR-209ENST00000541102 CAMTA2O94983 1202 aa18.65■□□□□ 0.58
LTBR-209ENST00000541102 LMOD3Q0VAK6 560 aa18.65■□□□□ 0.58
LTBR-209ENST00000541102 TSPYL4Q9UJ04 414 aa18.65■□□□□ 0.58
LTBR-209ENST00000541102 KIF13BQ9NQT8 1826 aa18.65■□□□□ 0.58
LTBR-209ENST00000541102 GIGYF1O75420 1035 aaPredicted RBP18.64■□□□□ 0.57
LTBR-209ENST00000541102 KCNA3P22001 575 aa18.64■□□□□ 0.57
LTBR-209ENST00000541102 PIM2Q9P1W9 311 aa18.64■□□□□ 0.57
LTBR-209ENST00000541102 UTRNP46939 3433 aa18.64■□□□□ 0.57
LTBR-209ENST00000541102 NGEFQ8N5V2 710 aa18.63■□□□□ 0.57
LTBR-209ENST00000541102 APAF1O14727 1248 aa18.62■□□□□ 0.57
LTBR-209ENST00000541102 DALRD3Q5D0E6 543 aaKnown RBP18.62■□□□□ 0.57
LTBR-209ENST00000541102 ARHGAP27Q6ZUM4 889 aa18.62■□□□□ 0.57
LTBR-209ENST00000541102 CCDC24Q8N4L8 307 aa18.62■□□□□ 0.57
LTBR-209ENST00000541102 SETDB2Q96T68 719 aa18.62■□□□□ 0.57
LTBR-209ENST00000541102 LAS1LQ9Y4W2 734 aaKnown RBP18.62■□□□□ 0.57
LTBR-209ENST00000541102 KIAA1551Q9HCM1 1747 aa18.61■□□□□ 0.57
LTBR-209ENST00000541102 TRIM35Q9UPQ4 493 aa18.61■□□□□ 0.57
LTBR-209ENST00000541102 KDM3BQ7LBC6 1761 aa18.6■□□□□ 0.57
LTBR-209ENST00000541102 NPHP1O15259 732 aa18.6■□□□□ 0.57
LTBR-209ENST00000541102 AFDNP55196 1824 aaKnown RBP18.59■□□□□ 0.57
LTBR-209ENST00000541102 MYL6BP14649 208 aa18.59■□□□□ 0.57
LTBR-209ENST00000541102 EIF2S2P20042 333 aaKnown RBP18.59■□□□□ 0.57
LTBR-209ENST00000541102 C2CD5Q86YS7 1000 aa18.59■□□□□ 0.57
LTBR-209ENST00000541102 GOLGB1Q14789 3259 aaKnown RBP18.59■□□□□ 0.57
LTBR-209ENST00000541102 PRR5LQ6MZQ0 368 aa18.58■□□□□ 0.56
LTBR-209ENST00000541102 BABAM1Q9NWV8 329 aa18.58■□□□□ 0.56
LTBR-209ENST00000541102 ZNF652Q9Y2D9 606 aa18.58■□□□□ 0.56
LTBR-209ENST00000541102 CARMIL3Q8ND23 1372 aa18.57■□□□□ 0.56
LTBR-209ENST00000541102 H0YIN7 160 aa18.57■□□□□ 0.56
LTBR-209ENST00000541102 CLEC4GQ6UXB4 293 aa18.57■□□□□ 0.56
LTBR-209ENST00000541102 HLFQ16534 295 aa18.56■□□□□ 0.56
LTBR-209ENST00000541102 CNBD1Q8NA66 436 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms