RNA–Protein interactions for RNA: ENST00000540664.6

LCOR-209, Transcript of ligand dependent nuclear receptor corepressor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LCOR, Length 2,213 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCOR-209ENST00000540664 PI4KAP1Q8N8J0 262 aa11.81□□□□□ -0.52
LCOR-209ENST00000540664 SLKQ9H2G2 1235 aaPredicted RBP11.81□□□□□ -0.52
LCOR-209ENST00000540664 NLRP2Q9NX02 1062 aa11.81□□□□□ -0.52
LCOR-209ENST00000540664 SLAIN2Q9P270 581 aa11.81□□□□□ -0.52
LCOR-209ENST00000540664 SLC52A2Q9HAB3 445 aa11.8□□□□□ -0.52
LCOR-209ENST00000540664 STAP2Q9UGK3 403 aa11.8□□□□□ -0.52
LCOR-209ENST00000540664 SPG7Q9UQ90 795 aa11.8□□□□□ -0.52
LCOR-209ENST00000540664 APBB1O00213 710 aa11.8□□□□□ -0.52
LCOR-209ENST00000540664 DDIT3P35638 169 aa11.8□□□□□ -0.52
LCOR-209ENST00000540664 HSCBQ8IWL3 235 aa11.8□□□□□ -0.52
LCOR-209ENST00000540664 SOS2Q07890 1332 aaPredicted RBP11.79□□□□□ -0.52
LCOR-209ENST00000540664 ALDH1L1O75891 902 aa11.79□□□□□ -0.52
LCOR-209ENST00000540664 USP26Q9BXU7 913 aa11.79□□□□□ -0.52
LCOR-209ENST00000540664 NHSL1Q5SYE7 1610 aa11.79□□□□□ -0.52
LCOR-209ENST00000540664 PRAMEF22A3QJZ6 481 aa11.79□□□□□ -0.52
LCOR-209ENST00000540664 ANXA1P04083 346 aa11.79□□□□□ -0.52
LCOR-209ENST00000540664 NBPF7P0C2Y1 421 aaPredicted RBP11.79□□□□□ -0.52
LCOR-209ENST00000540664 PROSER3Q2NL68 480 aa11.79□□□□□ -0.52
LCOR-209ENST00000540664 ZNF790Q6PG37 636 aa11.79□□□□□ -0.52
LCOR-209ENST00000540664 KSR2Q6VAB6 950 aa11.79□□□□□ -0.52
LCOR-209ENST00000540664 IFNL2Q8IZJ0 200 aa11.79□□□□□ -0.52
LCOR-209ENST00000540664 ABCA3Q99758 1704 aa11.79□□□□□ -0.52
LCOR-209ENST00000540664 HYPKQ9NX55 129 aa11.79□□□□□ -0.52
LCOR-209ENST00000540664 AOX1Q06278 1338 aa11.78□□□□□ -0.52
LCOR-209ENST00000540664 RAB11FIP3O75154 756 aa11.78□□□□□ -0.52
LCOR-209ENST00000540664 MTX1Q13505 466 aa11.78□□□□□ -0.52
LCOR-209ENST00000540664 PDIA6Q15084 440 aa11.78□□□□□ -0.52
LCOR-209ENST00000540664 CHRNA2Q15822 529 aa11.78□□□□□ -0.52
LCOR-209ENST00000540664 PPP1R42Q7Z4L9 355 aa11.78□□□□□ -0.52
LCOR-209ENST00000540664 DDX21Q9NR30 783 aaKnown RBP eCLIP11.78□□□□□ -0.52
LCOR-209ENST00000540664 GLI3P10071 1580 aa11.78□□□□□ -0.52
LCOR-209ENST00000540664 MX1P20591 662 aa11.78□□□□□ -0.52
LCOR-209ENST00000540664 CYP27B1O15528 508 aa11.77□□□□□ -0.53
LCOR-209ENST00000540664 CASC1Q6TDU7 716 aa11.77□□□□□ -0.53
LCOR-209ENST00000540664 DCAF5Q96JK2 942 aa11.77□□□□□ -0.53
LCOR-209ENST00000540664 UTYO14607 1347 aa11.77□□□□□ -0.53
LCOR-209ENST00000540664 CHMP5Q9NZZ3 219 aa11.76□□□□□ -0.53
LCOR-209ENST00000540664 MAP3K2Q9Y2U5 619 aa11.76□□□□□ -0.53
LCOR-209ENST00000540664 CSB-PGBD3P0DP91 1061 aa11.76□□□□□ -0.53
LCOR-209ENST00000540664 CD2BP2O95400 341 aaKnown RBP11.75□□□□□ -0.53
LCOR-209ENST00000540664 HSP90AB1P08238 724 aaKnown RBP11.75□□□□□ -0.53
LCOR-209ENST00000540664 NFATC2IPQ8NCF5 419 aa11.75□□□□□ -0.53
LCOR-209ENST00000540664 LAMB4A4D0S4 1761 aa11.75□□□□□ -0.53
LCOR-209ENST00000540664 SRGAP3O43295 1099 aa11.75□□□□□ -0.53
LCOR-209ENST00000540664 SLC39A6Q13433 755 aa11.75□□□□□ -0.53
LCOR-209ENST00000540664 RABEP1Q15276 862 aa11.75□□□□□ -0.53
LCOR-209ENST00000540664 LINS1Q8NG48 757 aa11.75□□□□□ -0.53
LCOR-209ENST00000540664 WDR17Q8IZU2 1322 aa11.75□□□□□ -0.53
LCOR-209ENST00000540664 COL5A2P05997 1499 aaPredicted RBP11.74□□□□□ -0.53
LCOR-209ENST00000540664 ERC2O15083 957 aa11.74□□□□□ -0.53
LCOR-209ENST00000540664 REC8O95072 547 aa11.74□□□□□ -0.53
LCOR-209ENST00000540664 DDX58O95786 925 aaKnown RBP11.74□□□□□ -0.53
LCOR-209ENST00000540664 LRP10Q7Z4F1 713 aa11.74□□□□□ -0.53
LCOR-209ENST00000540664 RHPN1Q8TCX5 695 aa11.74□□□□□ -0.53
LCOR-209ENST00000540664 RBM42Q9BTD8 480 aaKnown RBP11.74□□□□□ -0.53
LCOR-209ENST00000540664 K7ELQ4 463 aaPredicted RBP11.74□□□□□ -0.53
LCOR-209ENST00000540664 SURF6O75683 361 aaKnown RBP11.74□□□□□ -0.53
LCOR-209ENST00000540664 GSE1Q14687 1217 aa11.74□□□□□ -0.53
LCOR-209ENST00000540664 HSP90AB4PQ58FF6 505 aa11.74□□□□□ -0.53
LCOR-209ENST00000540664 KIF1BPQ96EK5 621 aa11.74□□□□□ -0.53
LCOR-209ENST00000540664 ZNF496Q96IT1 587 aaPredicted RBP11.74□□□□□ -0.53
LCOR-209ENST00000540664 BCL11AQ9H165 835 aa11.74□□□□□ -0.53
LCOR-209ENST00000540664 CIZ1Q9ULV3 898 aaPredicted RBP11.74□□□□□ -0.53
LCOR-209ENST00000540664 HDAC5Q9UQL6 1122 aa11.74□□□□□ -0.53
LCOR-209ENST00000540664 USP42Q9H9J4 1324 aaKnown RBP11.73□□□□□ -0.53
LCOR-209ENST00000540664 SHANK3Q9BYB0 1731 aa11.73□□□□□ -0.53
LCOR-209ENST00000540664 UBR2Q8IWV8 1755 aa11.73□□□□□ -0.53
LCOR-209ENST00000540664 PAPPAQ13219 1627 aa11.73□□□□□ -0.53
LCOR-209ENST00000540664 TSHZ3Q63HK5 1081 aa11.73□□□□□ -0.53
LCOR-209ENST00000540664 SPRYD3Q8NCJ5 442 aa11.73□□□□□ -0.53
LCOR-209ENST00000540664 PRDM11Q9NQV5 511 aa11.73□□□□□ -0.53
LCOR-209ENST00000540664 GRM8O00222 908 aa11.72□□□□□ -0.53
LCOR-209ENST00000540664 SNRPA1P09661 255 aaKnown RBP11.72□□□□□ -0.53
LCOR-209ENST00000540664 CHMLP26374 656 aa11.72□□□□□ -0.53
LCOR-209ENST00000540664 CWF19L2Q2TBE0 894 aaKnown RBP11.72□□□□□ -0.53
LCOR-209ENST00000540664 PI4K2BQ8TCG2 481 aa11.72□□□□□ -0.53
LCOR-209ENST00000540664 IL17RAQ96F46 866 aa11.72□□□□□ -0.53
LCOR-209ENST00000540664 KAZALD1Q96I82 304 aa11.72□□□□□ -0.53
LCOR-209ENST00000540664 ESYT1Q9BSJ8 1104 aa11.72□□□□□ -0.53
LCOR-209ENST00000540664 C9orf78Q9NZ63 289 aaPredicted RBP11.72□□□□□ -0.53
LCOR-209ENST00000540664 IGKV5-2P06315 115 aa11.71□□□□□ -0.53
LCOR-209ENST00000540664 LARP1Q6PKG0 1096 aaKnown RBP11.71□□□□□ -0.53
LCOR-209ENST00000540664 FMNL2Q96PY5 1086 aa11.71□□□□□ -0.53
LCOR-209ENST00000540664 IL1RAPL2Q9NP60 686 aa11.71□□□□□ -0.53
LCOR-209ENST00000540664 EPB41L2O43491 1005 aaKnown RBP11.71□□□□□ -0.54
LCOR-209ENST00000540664 NKX1-1Q15270 411 aaPredicted RBP11.71□□□□□ -0.54
LCOR-209ENST00000540664 PCDH11XQ9BZA7 1347 aa11.71□□□□□ -0.54
LCOR-209ENST00000540664 PCDH11YQ9BZA8 1340 aa11.71□□□□□ -0.54
LCOR-209ENST00000540664 MCM4P33991 863 aa11.7□□□□□ -0.54
LCOR-209ENST00000540664 UNC5CLQ8IV45 518 aa11.7□□□□□ -0.54
LCOR-209ENST00000540664 TTC5Q8N0Z6 440 aa11.7□□□□□ -0.54
LCOR-209ENST00000540664 ROBO1Q9Y6N7 1651 aa11.7□□□□□ -0.54
LCOR-209ENST00000540664 ARFGEF2Q9Y6D5 1785 aa11.7□□□□□ -0.54
LCOR-209ENST00000540664 AK9Q5TCS8 1911 aa11.7□□□□□ -0.54
LCOR-209ENST00000540664 CABP4P57796 275 aa11.7□□□□□ -0.54
LCOR-209ENST00000540664 NUTM1Q86Y26 1132 aa11.7□□□□□ -0.54
LCOR-209ENST00000540664 XAGE3Q8WTP9 111 aa11.7□□□□□ -0.54
LCOR-209ENST00000540664 SUCLG2Q96I99 432 aa11.7□□□□□ -0.54
LCOR-209ENST00000540664 METTL22Q9BUU2 404 aaPredicted RBP11.7□□□□□ -0.54
LCOR-209ENST00000540664 CARD10Q9BWT7 1032 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms