RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 MON2Q7Z3U7 1717 aa16.76■□□□□ 0.27
SCNN1A-215ENST00000540037 ACEP12821 1306 aa16.76■□□□□ 0.27
SCNN1A-215ENST00000540037 MTERF4Q7Z6M4 381 aaKnown RBP16.76■□□□□ 0.27
SCNN1A-215ENST00000540037 PYCARDQ9ULZ3 195 aa16.76■□□□□ 0.27
SCNN1A-215ENST00000540037 KDM4AO75164 1064 aa16.76■□□□□ 0.27
SCNN1A-215ENST00000540037 GNAI3P08754 354 aa16.76■□□□□ 0.27
SCNN1A-215ENST00000540037 DNM1Q05193 864 aaKnown RBP16.76■□□□□ 0.27
SCNN1A-215ENST00000540037 CWC27Q6UX04 472 aaKnown RBP16.76■□□□□ 0.27
SCNN1A-215ENST00000540037 FAM184AQ8NB25 1140 aa16.76■□□□□ 0.27
SCNN1A-215ENST00000540037 TTC14Q96N46 770 aa16.76■□□□□ 0.27
SCNN1A-215ENST00000540037 KCNF1Q9H3M0 494 aa16.76■□□□□ 0.27
SCNN1A-215ENST00000540037 CHMP3Q9Y3E7 222 aa16.76■□□□□ 0.27
SCNN1A-215ENST00000540037 NRKQ7Z2Y5 1582 aa16.76■□□□□ 0.27
SCNN1A-215ENST00000540037 UVSSAQ2YD98 709 aa16.75■□□□□ 0.27
SCNN1A-215ENST00000540037 SMAP1Q8IYB5 467 aaPredicted RBP16.75■□□□□ 0.27
SCNN1A-215ENST00000540037 SURF6O75683 361 aaKnown RBP16.75■□□□□ 0.27
SCNN1A-215ENST00000540037 TMEM87AQ8NBN3 555 aa16.75■□□□□ 0.27
SCNN1A-215ENST00000540037 PLEKHG5O94827 1062 aa16.75■□□□□ 0.27
SCNN1A-215ENST00000540037 UBE2HP62256 183 aa16.75■□□□□ 0.27
SCNN1A-215ENST00000540037 PI4K2BQ8TCG2 481 aa16.75■□□□□ 0.27
SCNN1A-215ENST00000540037 PHAXQ9H814 394 aaKnown RBP16.75■□□□□ 0.27
SCNN1A-215ENST00000540037 SSH2Q76I76 1423 aa16.74■□□□□ 0.27
SCNN1A-215ENST00000540037 F13A1P00488 732 aa16.74■□□□□ 0.27
SCNN1A-215ENST00000540037 ATP2B3Q16720 1220 aa16.74■□□□□ 0.27
SCNN1A-215ENST00000540037 CCDC83Q8IWF9 413 aa16.74■□□□□ 0.27
SCNN1A-215ENST00000540037 SGSM2O43147 1006 aa16.74■□□□□ 0.27
SCNN1A-215ENST00000540037 LSG1Q9H089 658 aaKnown RBP16.74■□□□□ 0.27
SCNN1A-215ENST00000540037 RAD50Q92878 1312 aa16.73■□□□□ 0.27
SCNN1A-215ENST00000540037 CASTP20810 708 aaKnown RBP16.73■□□□□ 0.27
SCNN1A-215ENST00000540037 COL9A3Q14050 684 aaPredicted RBP16.73■□□□□ 0.27
SCNN1A-215ENST00000540037 PPP1R42Q7Z4L9 355 aa16.73■□□□□ 0.27
SCNN1A-215ENST00000540037 IL17RAQ96F46 866 aa16.73■□□□□ 0.27
SCNN1A-215ENST00000540037 PRIMPOLQ96LW4 560 aa16.73■□□□□ 0.27
SCNN1A-215ENST00000540037 FUCA2Q9BTY2 467 aa16.73■□□□□ 0.27
SCNN1A-215ENST00000540037 UBTFL1P0CB47 393 aaPredicted RBP16.73■□□□□ 0.27
SCNN1A-215ENST00000540037 ADCK5Q3MIX3 580 aa16.73■□□□□ 0.27
SCNN1A-215ENST00000540037 BCL2L12Q9HB09 334 aa16.73■□□□□ 0.27
SCNN1A-215ENST00000540037 SMC3Q9UQE7 1217 aa16.73■□□□□ 0.27
SCNN1A-215ENST00000540037 PPP4R3BQ5MIZ7 849 aa16.72■□□□□ 0.27
SCNN1A-215ENST00000540037 SOS1Q07889 1333 aaPredicted RBP16.72■□□□□ 0.27
SCNN1A-215ENST00000540037 SPDYE4A6NLX3 237 aa16.72■□□□□ 0.27
SCNN1A-215ENST00000540037 ZSCAN20P17040 1043 aaPredicted RBP16.72■□□□□ 0.27
SCNN1A-215ENST00000540037 EYA1Q99502 592 aa16.72■□□□□ 0.27
SCNN1A-215ENST00000540037 SPTLC3Q9NUV7 552 aa16.72■□□□□ 0.27
SCNN1A-215ENST00000540037 LIMCH1Q9UPQ0 1083 aa16.72■□□□□ 0.27
SCNN1A-215ENST00000540037 GJB2P29033 226 aa16.72■□□□□ 0.27
SCNN1A-215ENST00000540037 HMGN5P82970 282 aaKnown RBP16.72■□□□□ 0.27
SCNN1A-215ENST00000540037 FAM173BQ6P4H8 233 aa16.72■□□□□ 0.27
SCNN1A-215ENST00000540037 KIF3AQ9Y496 699 aa16.72■□□□□ 0.27
SCNN1A-215ENST00000540037 CCDC30Q5VVM6 783 aa16.71■□□□□ 0.27
SCNN1A-215ENST00000540037 RHPN1Q8TCX5 695 aa16.71■□□□□ 0.27
SCNN1A-215ENST00000540037 NRXN3Q9Y4C0 1643 aa16.71■□□□□ 0.27
SCNN1A-215ENST00000540037 OVOS2A0A0J9YW53 1432 aa16.71■□□□□ 0.26
SCNN1A-215ENST00000540037 OVOS2Q6IE36 1432 aa16.71■□□□□ 0.26
SCNN1A-215ENST00000540037 AKAP12Q02952 1782 aa16.71■□□□□ 0.26
SCNN1A-215ENST00000540037 VPS37CA5D8V6 355 aaPredicted RBP16.7■□□□□ 0.26
SCNN1A-215ENST00000540037 GTF2F1P35269 517 aaKnown RBP eCLIP16.7■□□□□ 0.26
SCNN1A-215ENST00000540037 PTH1RQ03431 593 aa16.7■□□□□ 0.26
SCNN1A-215ENST00000540037 CAMK4Q16566 473 aa16.7■□□□□ 0.26
SCNN1A-215ENST00000540037 NECAB1Q8N987 351 aa16.7■□□□□ 0.26
SCNN1A-215ENST00000540037 ITSN1Q15811 1721 aa16.7■□□□□ 0.26
SCNN1A-215ENST00000540037 NBPF7P0C2Y1 421 aaPredicted RBP16.7■□□□□ 0.26
SCNN1A-215ENST00000540037 KIAA1524Q8TCG1 905 aa16.7■□□□□ 0.26
SCNN1A-215ENST00000540037 SSH3Q8TE77 659 aa16.7■□□□□ 0.26
SCNN1A-215ENST00000540037 ROBO2Q9HCK4 1378 aa16.7■□□□□ 0.26
SCNN1A-215ENST00000540037 RIOK3O14730 519 aaKnown RBP16.7■□□□□ 0.26
SCNN1A-215ENST00000540037 SRGAP3O43295 1099 aa16.7■□□□□ 0.26
SCNN1A-215ENST00000540037 ST3GAL1Q11201 340 aa16.7■□□□□ 0.26
SCNN1A-215ENST00000540037 FERMT3Q86UX7 667 aa16.7■□□□□ 0.26
SCNN1A-215ENST00000540037 HYPKQ9NX55 129 aa16.7■□□□□ 0.26
SCNN1A-215ENST00000540037 MTMR6Q9Y217 621 aa16.7■□□□□ 0.26
SCNN1A-215ENST00000540037 CEP170BQ9Y4F5 1589 aaPredicted RBP16.69■□□□□ 0.26
SCNN1A-215ENST00000540037 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.69■□□□□ 0.26
SCNN1A-215ENST00000540037 RGPD1P0DJD0 1748 aa16.69■□□□□ 0.26
SCNN1A-215ENST00000540037 XRN1Q8IZH2 1706 aaKnown RBP16.69■□□□□ 0.26
SCNN1A-215ENST00000540037 BCL11BQ9C0K0 894 aaPredicted RBP16.68■□□□□ 0.26
SCNN1A-215ENST00000540037 PRPF40BQ6NWY9 871 aaKnown RBP16.68■□□□□ 0.26
SCNN1A-215ENST00000540037 IL17REQ8NFR9 667 aa16.68■□□□□ 0.26
SCNN1A-215ENST00000540037 JAKMIP1Q96N16 626 aaKnown RBP16.68■□□□□ 0.26
SCNN1A-215ENST00000540037 LETM1O95202 739 aaPredicted RBP16.67■□□□□ 0.26
SCNN1A-215ENST00000540037 EIF2S2P20042 333 aaKnown RBP16.67■□□□□ 0.26
SCNN1A-215ENST00000540037 IGSF3O75054 1194 aa16.67■□□□□ 0.26
SCNN1A-215ENST00000540037 ANXA1P04083 346 aa16.67■□□□□ 0.26
SCNN1A-215ENST00000540037 PTGS1P23219 599 aa16.67■□□□□ 0.26
SCNN1A-215ENST00000540037 DMTNQ08495 405 aa16.67■□□□□ 0.26
SCNN1A-215ENST00000540037 LUZP1Q86V48 1076 aa16.67■□□□□ 0.26
SCNN1A-215ENST00000540037 ME3Q16798 604 aa16.66■□□□□ 0.26
SCNN1A-215ENST00000540037 NUTM2GQ5VZR2 741 aa16.66■□□□□ 0.26
SCNN1A-215ENST00000540037 TCEANC2Q96MN5 208 aa16.66■□□□□ 0.26
SCNN1A-215ENST00000540037 AOX1Q06278 1338 aa16.66■□□□□ 0.26
SCNN1A-215ENST00000540037 LIG1P18858 919 aa16.66■□□□□ 0.26
SCNN1A-215ENST00000540037 U2AF2P26368 475 aaKnown RBP eCLIP16.66■□□□□ 0.26
SCNN1A-215ENST00000540037 AMPHP49418 695 aa16.66■□□□□ 0.26
SCNN1A-215ENST00000540037 LRMPQ12912 555 aa16.66■□□□□ 0.26
SCNN1A-215ENST00000540037 CKAP2LQ8IYA6 745 aa16.66■□□□□ 0.26
SCNN1A-215ENST00000540037 CNTROBQ8N137 903 aa16.66■□□□□ 0.26
SCNN1A-215ENST00000540037 LTV1Q96GA3 475 aaPredicted RBP16.66■□□□□ 0.26
SCNN1A-215ENST00000540037 ARHGEF10O15013 1369 aa16.65■□□□□ 0.26
SCNN1A-215ENST00000540037 TTC6Q86TZ1 520 aa16.65■□□□□ 0.26
SCNN1A-215ENST00000540037 PDRG1Q9NUG6 133 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms