RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 NARFQ9UHQ1 456 aa15.95■□□□□ 0.14
CLSTN3-209ENST00000539982 ADAMTS7Q9UKP4 1686 aa15.95■□□□□ 0.14
CLSTN3-209ENST00000539982 SOS1Q07889 1333 aaPredicted RBP15.94■□□□□ 0.14
CLSTN3-209ENST00000539982 HSPA1AP0DMV8 641 aaKnown RBP15.94■□□□□ 0.14
CLSTN3-209ENST00000539982 HSPA1BP0DMV9 641 aaKnown RBP15.94■□□□□ 0.14
CLSTN3-209ENST00000539982 CYP19A1P11511 503 aaPredicted RBP15.94■□□□□ 0.14
CLSTN3-209ENST00000539982 SERPINB2P05120 415 aa15.93■□□□□ 0.14
CLSTN3-209ENST00000539982 AKAP4Q5JQC9 854 aa15.92■□□□□ 0.14
CLSTN3-209ENST00000539982 C2CD5Q86YS7 1000 aa15.92■□□□□ 0.14
CLSTN3-209ENST00000539982 PANK3Q9H999 370 aa15.92■□□□□ 0.14
CLSTN3-209ENST00000539982 SLC52A2Q9HAB3 445 aa15.92■□□□□ 0.14
CLSTN3-209ENST00000539982 POTECB2RU33 542 aa15.91■□□□□ 0.14
CLSTN3-209ENST00000539982 H0YIN7 160 aa15.91■□□□□ 0.14
CLSTN3-209ENST00000539982 DPY19L2Q6NUT2 758 aa15.91■□□□□ 0.14
CLSTN3-209ENST00000539982 MORC1Q86VD1 984 aa15.91■□□□□ 0.14
CLSTN3-209ENST00000539982 BCL2L12Q9HB09 334 aa15.91■□□□□ 0.14
CLSTN3-209ENST00000539982 LGR6Q9HBX8 967 aa15.91■□□□□ 0.14
CLSTN3-209ENST00000539982 TIMELESSQ9UNS1 1208 aa15.91■□□□□ 0.14
CLSTN3-209ENST00000539982 AFDNP55196 1824 aaKnown RBP15.9■□□□□ 0.14
CLSTN3-209ENST00000539982 IL13P35225 146 aa15.9■□□□□ 0.14
CLSTN3-209ENST00000539982 NRXN2Q9P2S2 1712 aa15.9■□□□□ 0.14
CLSTN3-209ENST00000539982 SCN11AQ9UI33 1791 aa15.9■□□□□ 0.14
CLSTN3-209ENST00000539982 COL15A1P39059 1388 aa15.89■□□□□ 0.13
CLSTN3-209ENST00000539982 NFKBIEO00221 500 aa15.89■□□□□ 0.13
CLSTN3-209ENST00000539982 SLC39A6Q13433 755 aa15.89■□□□□ 0.13
CLSTN3-209ENST00000539982 ZBTB1Q9Y2K1 713 aa15.89■□□□□ 0.13
CLSTN3-209ENST00000539982 RNMTO43148 476 aaKnown RBP15.88■□□□□ 0.13
CLSTN3-209ENST00000539982 VSIG10Q8N0Z9 540 aa15.88■□□□□ 0.13
CLSTN3-209ENST00000539982 DLEC1Q9Y238 1755 aa15.87■□□□□ 0.13
CLSTN3-209ENST00000539982 CCDC88AQ3V6T2 1871 aa15.87■□□□□ 0.13
CLSTN3-209ENST00000539982 PDZRN3Q9UPQ7 1066 aa15.87■□□□□ 0.13
CLSTN3-209ENST00000539982 CANXP27824 592 aaKnown RBP15.86■□□□□ 0.13
CLSTN3-209ENST00000539982 ERFEQ4G0M1 354 aa15.86■□□□□ 0.13
CLSTN3-209ENST00000539982 A0A087WZG4 1122 aa15.85■□□□□ 0.13
CLSTN3-209ENST00000539982 EIF5P55010 431 aaKnown RBP15.85■□□□□ 0.13
CLSTN3-209ENST00000539982 CHADLQ6NUI6 762 aa15.85■□□□□ 0.13
CLSTN3-209ENST00000539982 BICDL1Q6ZP65 573 aa15.85■□□□□ 0.13
CLSTN3-209ENST00000539982 ZNF622Q969S3 477 aaKnown RBP eCLIP15.85■□□□□ 0.13
CLSTN3-209ENST00000539982 BRIP1Q9BX63 1249 aa15.85■□□□□ 0.13
CLSTN3-209ENST00000539982 CREBZFQ9NS37 354 aa15.85■□□□□ 0.13
CLSTN3-209ENST00000539982 CARMIL3Q8ND23 1372 aa15.85■□□□□ 0.13
CLSTN3-209ENST00000539982 TIAM2Q8IVF5 1701 aa15.85■□□□□ 0.13
CLSTN3-209ENST00000539982 C21orf2O43822 256 aa15.84■□□□□ 0.13
CLSTN3-209ENST00000539982 STARD3NLO95772 234 aa15.84■□□□□ 0.13
CLSTN3-209ENST00000539982 PDE6BP35913 854 aa15.84■□□□□ 0.13
CLSTN3-209ENST00000539982 MRC1P22897 1456 aa15.84■□□□□ 0.13
CLSTN3-209ENST00000539982 EIF4G2P78344 907 aaKnown RBP eCLIP15.82■□□□□ 0.12
CLSTN3-209ENST00000539982 MTHFSDQ2M296 383 aaKnown RBP15.82■□□□□ 0.12
CLSTN3-209ENST00000539982 TBC1D9BQ66K14 1250 aa15.82■□□□□ 0.12
CLSTN3-209ENST00000539982 ZNF219Q9P2Y4 722 aaPredicted RBP15.82■□□□□ 0.12
CLSTN3-209ENST00000539982 MKRN1Q9UHC7 482 aaKnown RBP15.82■□□□□ 0.12
CLSTN3-209ENST00000539982 KNSTRNQ9Y448 316 aa15.82■□□□□ 0.12
CLSTN3-209ENST00000539982 LTBP3Q9NS15 1303 aa15.82■□□□□ 0.12
CLSTN3-209ENST00000539982 HMOX1P09601 288 aa15.81■□□□□ 0.12
CLSTN3-209ENST00000539982 PRR5LQ6MZQ0 368 aa15.81■□□□□ 0.12
CLSTN3-209ENST00000539982 DICER1Q9UPY3 1922 aaKnown RBP15.8■□□□□ 0.12
CLSTN3-209ENST00000539982 DDNO94850 711 aaPredicted RBP15.8■□□□□ 0.12
CLSTN3-209ENST00000539982 HSPA5P11021 654 aaKnown RBP15.8■□□□□ 0.12
CLSTN3-209ENST00000539982 TTC5Q8N0Z6 440 aa15.8■□□□□ 0.12
CLSTN3-209ENST00000539982 TEX13AQ9BXU3 409 aaPredicted RBP15.8■□□□□ 0.12
CLSTN3-209ENST00000539982 TAOK3Q9H2K8 898 aa15.8■□□□□ 0.12
CLSTN3-209ENST00000539982 POTEIP0CG38 1075 aa15.79■□□□□ 0.12
CLSTN3-209ENST00000539982 POTEJP0CG39 1038 aa15.79■□□□□ 0.12
CLSTN3-209ENST00000539982 CCDC24Q8N4L8 307 aa15.79■□□□□ 0.12
CLSTN3-209ENST00000539982 CNKSR1Q969H4 720 aa15.79■□□□□ 0.12
CLSTN3-209ENST00000539982 TBC1D2BQ9UPU7 963 aa15.79■□□□□ 0.12
CLSTN3-209ENST00000539982 FER1L6Q2WGJ9 1857 aa15.79■□□□□ 0.12
CLSTN3-209ENST00000539982 ANKRD31Q8N7Z5 1873 aa15.78■□□□□ 0.12
CLSTN3-209ENST00000539982 FOXN1O15353 648 aa15.78■□□□□ 0.12
CLSTN3-209ENST00000539982 STYK1Q6J9G0 422 aa15.78■□□□□ 0.12
CLSTN3-209ENST00000539982 PRDM10Q9NQV6 1147 aa15.78■□□□□ 0.12
CLSTN3-209ENST00000539982 CNTNAP1P78357 1384 aa15.77■□□□□ 0.12
CLSTN3-209ENST00000539982 PASKQ96RG2 1323 aa15.77■□□□□ 0.12
CLSTN3-209ENST00000539982 IQCA1LA6NCM1 817 aa15.77■□□□□ 0.12
CLSTN3-209ENST00000539982 SRGNP10124 158 aa15.77■□□□□ 0.12
CLSTN3-209ENST00000539982 IL6STP40189 918 aaPredicted RBP15.77■□□□□ 0.12
CLSTN3-209ENST00000539982 SOGA3Q5TF21 947 aa15.77■□□□□ 0.12
CLSTN3-209ENST00000539982 ZNF496Q96IT1 587 aaPredicted RBP15.77■□□□□ 0.12
CLSTN3-209ENST00000539982 SETDB2Q96T68 719 aa15.77■□□□□ 0.12
CLSTN3-209ENST00000539982 VIRMAQ69YN4 1812 aaKnown RBP15.77■□□□□ 0.11
CLSTN3-209ENST00000539982 UBR2Q8IWV8 1755 aa15.77■□□□□ 0.11
CLSTN3-209ENST00000539982 AMER1Q5JTC6 1135 aaPredicted RBP15.76■□□□□ 0.11
CLSTN3-209ENST00000539982 ZNF790Q6PG37 636 aa15.76■□□□□ 0.11
CLSTN3-209ENST00000539982 LDHDQ86WU2 507 aa15.76■□□□□ 0.11
CLSTN3-209ENST00000539982 ZNF330Q9Y3S2 320 aaPredicted RBP15.76■□□□□ 0.11
CLSTN3-209ENST00000539982 HEG1Q9ULI3 1381 aa15.75■□□□□ 0.11
CLSTN3-209ENST00000539982 TRIM26Q12899 539 aaPredicted RBP15.75■□□□□ 0.11
CLSTN3-209ENST00000539982 PRPF40BQ6NWY9 871 aaKnown RBP15.75■□□□□ 0.11
CLSTN3-209ENST00000539982 NPM2Q86SE8 214 aaKnown RBP15.75■□□□□ 0.11
CLSTN3-209ENST00000539982 CNBD1Q8NA66 436 aa15.75■□□□□ 0.11
CLSTN3-209ENST00000539982 MASTLQ96GX5 879 aa15.75■□□□□ 0.11
CLSTN3-209ENST00000539982 L3MBTL3Q96JM7 780 aaPredicted RBP15.75■□□□□ 0.11
CLSTN3-209ENST00000539982 TAF1DQ9H5J8 278 aaPredicted RBP15.75■□□□□ 0.11
CLSTN3-209ENST00000539982 TMEM88BA6NKF7 163 aa15.74■□□□□ 0.11
CLSTN3-209ENST00000539982 NPHP1O15259 732 aa15.74■□□□□ 0.11
CLSTN3-209ENST00000539982 DIAPH1O60610 1272 aaKnown RBP15.74■□□□□ 0.11
CLSTN3-209ENST00000539982 CTCFP49711 727 aaPredicted RBP15.74■□□□□ 0.11
CLSTN3-209ENST00000539982 ST5P78524 1137 aa15.74■□□□□ 0.11
CLSTN3-209ENST00000539982 TEFQ10587 303 aa15.74■□□□□ 0.11
CLSTN3-209ENST00000539982 IL17REQ8NFR9 667 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms