RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 RAI14Q9P0K7 980 aa15.58■□□□□ 0.08
DDX55-206ENST00000539934 U2AF1L5P0DN76 240 aaPredicted RBP15.58■□□□□ 0.08
DDX55-206ENST00000539934 U2AF1Q01081 240 aaKnown RBP eCLIP15.58■□□□□ 0.08
DDX55-206ENST00000539934 CASC1Q6TDU7 716 aa15.58■□□□□ 0.08
DDX55-206ENST00000539934 TMTC2Q8N394 836 aa15.57■□□□□ 0.08
DDX55-206ENST00000539934 SATB1Q01826 763 aa15.56■□□□□ 0.08
DDX55-206ENST00000539934 GPR162Q16538 588 aa15.56■□□□□ 0.08
DDX55-206ENST00000539934 NME9Q86XW9 330 aa15.56■□□□□ 0.08
DDX55-206ENST00000539934 AEBP1Q8IUX7 1158 aa15.56■□□□□ 0.08
DDX55-206ENST00000539934 BANK1Q8NDB2 785 aa15.56■□□□□ 0.08
DDX55-206ENST00000539934 SGIP1Q9BQI5 828 aa15.56■□□□□ 0.08
DDX55-206ENST00000539934 MTFR1LQ9H019 292 aa15.56■□□□□ 0.08
DDX55-206ENST00000539934 COL3A1P02461 1466 aaPredicted RBP15.56■□□□□ 0.08
DDX55-206ENST00000539934 U2SURPO15042 1029 aaKnown RBP15.56■□□□□ 0.08
DDX55-206ENST00000539934 RRP1P56182 461 aaKnown RBP15.56■□□□□ 0.08
DDX55-206ENST00000539934 MAP2K1Q02750 393 aaPredicted RBP15.56■□□□□ 0.08
DDX55-206ENST00000539934 HSP90AB4PQ58FF6 505 aa15.56■□□□□ 0.08
DDX55-206ENST00000539934 WDR17Q8IZU2 1322 aa15.56■□□□□ 0.08
DDX55-206ENST00000539934 AATKQ6ZMQ8 1374 aa15.55■□□□□ 0.08
DDX55-206ENST00000539934 RGPD5Q99666 1765 aa15.55■□□□□ 0.08
DDX55-206ENST00000539934 DUSP27Q5VZP5 1158 aa15.55■□□□□ 0.08
DDX55-206ENST00000539934 COG3Q96JB2 828 aa15.55■□□□□ 0.08
DDX55-206ENST00000539934 CHD4Q14839 1912 aa15.55■□□□□ 0.08
DDX55-206ENST00000539934 EXOC5O00471 708 aa15.54■□□□□ 0.08
DDX55-206ENST00000539934 KCNQ4P56696 695 aa15.54■□□□□ 0.08
DDX55-206ENST00000539934 NEUROD2Q15784 382 aa15.54■□□□□ 0.08
DDX55-206ENST00000539934 NBPF10Q6P3W6 841 aaKnown RBP15.54■□□□□ 0.08
DDX55-206ENST00000539934 ZNF500O60304 480 aaPredicted RBP15.53■□□□□ 0.08
DDX55-206ENST00000539934 DIAPH1O60610 1272 aaKnown RBP15.53■□□□□ 0.08
DDX55-206ENST00000539934 RIPK4P57078 832 aa15.53■□□□□ 0.08
DDX55-206ENST00000539934 SLFN5Q08AF3 891 aa15.53■□□□□ 0.08
DDX55-206ENST00000539934 CCDC94Q9BW85 323 aaPredicted RBP15.53■□□□□ 0.08
DDX55-206ENST00000539934 PCNTO95613 3336 aa15.53■□□□□ 0.08
DDX55-206ENST00000539934 LMOD3Q0VAK6 560 aa15.53■□□□□ 0.08
DDX55-206ENST00000539934 ZNF827Q17R98 1081 aa15.53■□□□□ 0.08
DDX55-206ENST00000539934 NECTIN2Q92692 538 aa15.53■□□□□ 0.08
DDX55-206ENST00000539934 PRR29P0C7W0 189 aa15.52■□□□□ 0.08
DDX55-206ENST00000539934 RRP7AQ9Y3A4 280 aaKnown RBP15.52■□□□□ 0.08
DDX55-206ENST00000539934 RGPD3A6NKT7 1758 aaPredicted RBP15.52■□□□□ 0.08
DDX55-206ENST00000539934 RGPD4Q7Z3J3 1758 aa15.52■□□□□ 0.08
DDX55-206ENST00000539934 USP6P35125 1406 aa15.52■□□□□ 0.08
DDX55-206ENST00000539934 ESPNB1AK53 854 aa15.52■□□□□ 0.07
DDX55-206ENST00000539934 FBLN1P23142 703 aa15.52■□□□□ 0.07
DDX55-206ENST00000539934 FAM177A1Q8N128 213 aaPredicted RBP15.52■□□□□ 0.07
DDX55-206ENST00000539934 POLKQ9UBT6 870 aa15.52■□□□□ 0.07
DDX55-206ENST00000539934 TSPYL1Q9H0U9 437 aa15.51■□□□□ 0.07
DDX55-206ENST00000539934 BSDC1Q9NW68 430 aaPredicted RBP15.51■□□□□ 0.07
DDX55-206ENST00000539934 GIGYF1O75420 1035 aaPredicted RBP15.51■□□□□ 0.07
DDX55-206ENST00000539934 IFFO2Q5TF58 517 aa15.51■□□□□ 0.07
DDX55-206ENST00000539934 ARHGEF25Q86VW2 580 aa15.51■□□□□ 0.07
DDX55-206ENST00000539934 LRRC4BQ9NT99 713 aa15.51■□□□□ 0.07
DDX55-206ENST00000539934 TTC21BQ7Z4L5 1316 aa15.51■□□□□ 0.07
DDX55-206ENST00000539934 COL18A1P39060 1754 aa15.51■□□□□ 0.07
DDX55-206ENST00000539934 B4GALNT3Q6L9W6 998 aa15.5■□□□□ 0.07
DDX55-206ENST00000539934 ZBTB22O15209 634 aa15.49■□□□□ 0.07
DDX55-206ENST00000539934 KIAA1211Q6ZU35 1233 aa15.49■□□□□ 0.07
DDX55-206ENST00000539934 PIK3C2AO00443 1686 aa15.49■□□□□ 0.07
DDX55-206ENST00000539934 GOLIM4O00461 696 aa15.49■□□□□ 0.07
DDX55-206ENST00000539934 TRMT2AQ8IZ69 625 aaKnown RBP15.49■□□□□ 0.07
DDX55-206ENST00000539934 MPNDQ8N594 471 aa15.49■□□□□ 0.07
DDX55-206ENST00000539934 NLGN2Q8NFZ4 835 aa15.49■□□□□ 0.07
DDX55-206ENST00000539934 SPINK5Q9NQ38 1064 aaPredicted RBP15.49■□□□□ 0.07
DDX55-206ENST00000539934 MAPK8IP3Q9UPT6 1336 aa15.49■□□□□ 0.07
DDX55-206ENST00000539934 EMILIN1Q9Y6C2 1016 aa15.49■□□□□ 0.07
DDX55-206ENST00000539934 NBPF6Q5VWK0 638 aa15.48■□□□□ 0.07
DDX55-206ENST00000539934 TSHZ1Q6ZSZ6 1077 aa15.48■□□□□ 0.07
DDX55-206ENST00000539934 NBPF5PQ86XG9 351 aaPredicted RBP15.48■□□□□ 0.07
DDX55-206ENST00000539934 NBPF4Q96M43 638 aa15.48■□□□□ 0.07
DDX55-206ENST00000539934 EFCC1Q9HA90 598 aa15.48■□□□□ 0.07
DDX55-206ENST00000539934 WNK3Q9BYP7 1800 aa15.48■□□□□ 0.07
DDX55-206ENST00000539934 SLIT3O75094 1523 aa15.48■□□□□ 0.07
DDX55-206ENST00000539934 NLRP2Q9NX02 1062 aa15.47■□□□□ 0.07
DDX55-206ENST00000539934 SSR1P43307 286 aaKnown RBP15.47■□□□□ 0.07
DDX55-206ENST00000539934 CDCA7Q9BWT1 371 aaPredicted RBP15.47■□□□□ 0.07
DDX55-206ENST00000539934 RRS1Q15050 365 aaKnown RBP15.46■□□□□ 0.07
DDX55-206ENST00000539934 CCDC96Q2M329 555 aa15.46■□□□□ 0.07
DDX55-206ENST00000539934 PLEKHF1Q96S99 279 aa15.46■□□□□ 0.07
DDX55-206ENST00000539934 CGNQ9P2M7 1197 aaKnown RBP15.46■□□□□ 0.07
DDX55-206ENST00000539934 ZKSCAN8Q15776 578 aaPredicted RBP15.45■□□□□ 0.06
DDX55-206ENST00000539934 CHMP4CQ96CF2 233 aa15.45■□□□□ 0.06
DDX55-206ENST00000539934 CEP83Q9Y592 693 aa15.45■□□□□ 0.06
DDX55-206ENST00000539934 TTC21AQ8NDW8 1320 aa15.45■□□□□ 0.06
DDX55-206ENST00000539934 PLIN1O60240 522 aa15.45■□□□□ 0.06
DDX55-206ENST00000539934 WDR63Q8IWG1 891 aa15.45■□□□□ 0.06
DDX55-206ENST00000539934 BCL9O00512 1426 aa15.44■□□□□ 0.06
DDX55-206ENST00000539934 SYTL4Q96C24 671 aaPredicted RBP15.44■□□□□ 0.06
DDX55-206ENST00000539934 WWC3Q9ULE0 1092 aa15.44■□□□□ 0.06
DDX55-206ENST00000539934 FCHSD2O94868 740 aa15.43■□□□□ 0.06
DDX55-206ENST00000539934 ARID4AP29374 1257 aaPredicted RBP15.43■□□□□ 0.06
DDX55-206ENST00000539934 RINLQ6ZS11 566 aa15.43■□□□□ 0.06
DDX55-206ENST00000539934 DDX54Q8TDD1 881 aaKnown RBP15.43■□□□□ 0.06
DDX55-206ENST00000539934 TNS2Q63HR2 1409 aa15.43■□□□□ 0.06
DDX55-206ENST00000539934 YBX3P16989 372 aaKnown RBP eCLIP15.43■□□□□ 0.06
DDX55-206ENST00000539934 TMPOP42166 694 aaKnown RBP15.43■□□□□ 0.06
DDX55-206ENST00000539934 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.43■□□□□ 0.06
DDX55-206ENST00000539934 KCNH5Q8NCM2 988 aa15.43■□□□□ 0.06
DDX55-206ENST00000539934 EXOC6Q8TAG9 804 aa15.43■□□□□ 0.06
DDX55-206ENST00000539934 RNF217Q8TC41 542 aa15.43■□□□□ 0.06
DDX55-206ENST00000539934 EXOC8Q8IYI6 725 aa15.42■□□□□ 0.06
DDX55-206ENST00000539934 TFCP2L1Q9NZI6 479 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms