RNA–Protein interactions for RNA: ENST00000538036.1

VPS37C-204, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 506 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-204ENST00000538036 VSIG10Q8N0Z9 540 aa13.94□□□□□ -0.18
VPS37C-204ENST00000538036 HTRA3P83110 453 aa13.93□□□□□ -0.18
VPS37C-204ENST00000538036 NFIXQ14938 502 aa13.93□□□□□ -0.18
VPS37C-204ENST00000538036 TTLL6Q8N841 843 aa13.93□□□□□ -0.18
VPS37C-204ENST00000538036 KNSTRNQ9Y448 316 aa13.93□□□□□ -0.18
VPS37C-204ENST00000538036 SERPINB2P05120 415 aa13.92□□□□□ -0.18
VPS37C-204ENST00000538036 COL13A1Q5TAT6 717 aaPredicted RBP13.92□□□□□ -0.18
VPS37C-204ENST00000538036 PDZRN3Q9UPQ7 1066 aa13.92□□□□□ -0.18
VPS37C-204ENST00000538036 H0YIN7 160 aa13.91□□□□□ -0.18
VPS37C-204ENST00000538036 RNMTO43148 476 aaKnown RBP13.91□□□□□ -0.18
VPS37C-204ENST00000538036 LGR6Q9HBX8 967 aa13.91□□□□□ -0.18
VPS37C-204ENST00000538036 COL15A1P39059 1388 aa13.91□□□□□ -0.18
VPS37C-204ENST00000538036 TNRC6CQ9HCJ0 1690 aaKnown RBP13.91□□□□□ -0.18
VPS37C-204ENST00000538036 TJP1Q07157 1748 aa13.9□□□□□ -0.18
VPS37C-204ENST00000538036 A0A087WZG4 1122 aa13.9□□□□□ -0.18
VPS37C-204ENST00000538036 HSPA5P11021 654 aaKnown RBP13.9□□□□□ -0.18
VPS37C-204ENST00000538036 RASSF7Q02833 373 aa13.9□□□□□ -0.18
VPS37C-204ENST00000538036 DPY19L2Q6NUT2 758 aa13.9□□□□□ -0.18
VPS37C-204ENST00000538036 C2CD5Q86YS7 1000 aa13.9□□□□□ -0.18
VPS37C-204ENST00000538036 BCL2L12Q9HB09 334 aa13.9□□□□□ -0.18
VPS37C-204ENST00000538036 ADAMTS7Q9UKP4 1686 aa13.89□□□□□ -0.19
VPS37C-204ENST00000538036 STARD3NLO95772 234 aa13.89□□□□□ -0.19
VPS37C-204ENST00000538036 SLC39A6Q13433 755 aa13.89□□□□□ -0.19
VPS37C-204ENST00000538036 TNS4Q8IZW8 715 aa13.89□□□□□ -0.19
VPS37C-204ENST00000538036 ZBTB1Q9Y2K1 713 aa13.89□□□□□ -0.19
VPS37C-204ENST00000538036 MRC1P22897 1456 aa13.88□□□□□ -0.19
VPS37C-204ENST00000538036 SBF1O95248 1867 aa13.88□□□□□ -0.19
VPS37C-204ENST00000538036 SCN11AQ9UI33 1791 aa13.88□□□□□ -0.19
VPS37C-204ENST00000538036 PDE6BP35913 854 aa13.87□□□□□ -0.19
VPS37C-204ENST00000538036 EIF5P55010 431 aaKnown RBP13.87□□□□□ -0.19
VPS37C-204ENST00000538036 BRIP1Q9BX63 1249 aa13.87□□□□□ -0.19
VPS37C-204ENST00000538036 TEX13AQ9BXU3 409 aaPredicted RBP13.87□□□□□ -0.19
VPS37C-204ENST00000538036 NFKBIEO00221 500 aa13.86□□□□□ -0.19
VPS37C-204ENST00000538036 CANXP27824 592 aaKnown RBP13.86□□□□□ -0.19
VPS37C-204ENST00000538036 PRELPP51888 382 aa13.86□□□□□ -0.19
VPS37C-204ENST00000538036 MTHFSDQ2M296 383 aaKnown RBP13.86□□□□□ -0.19
VPS37C-204ENST00000538036 AMER1Q5JTC6 1135 aaPredicted RBP13.86□□□□□ -0.19
VPS37C-204ENST00000538036 TTC5Q8N0Z6 440 aa13.86□□□□□ -0.19
VPS37C-204ENST00000538036 NRXN2Q9P2S2 1712 aa13.86□□□□□ -0.19
VPS37C-204ENST00000538036 HMOX1P09601 288 aa13.85□□□□□ -0.19
VPS37C-204ENST00000538036 POTECB2RU33 542 aa13.84□□□□□ -0.19
VPS37C-204ENST00000538036 DIAPH1O60610 1272 aaKnown RBP13.84□□□□□ -0.19
VPS37C-204ENST00000538036 ERFEQ4G0M1 354 aa13.84□□□□□ -0.19
VPS37C-204ENST00000538036 BICDL1Q6ZP65 573 aa13.84□□□□□ -0.19
VPS37C-204ENST00000538036 LTBP3Q9NS15 1303 aa13.84□□□□□ -0.19
VPS37C-204ENST00000538036 HSPA1AP0DMV8 641 aaKnown RBP13.83□□□□□ -0.2
VPS37C-204ENST00000538036 HSPA1BP0DMV9 641 aaKnown RBP13.83□□□□□ -0.2
VPS37C-204ENST00000538036 IL6STP40189 918 aaPredicted RBP13.83□□□□□ -0.2
VPS37C-204ENST00000538036 SOGA3Q5TF21 947 aa13.83□□□□□ -0.2
VPS37C-204ENST00000538036 NPM2Q86SE8 214 aaKnown RBP13.83□□□□□ -0.2
VPS37C-204ENST00000538036 ZNF622Q969S3 477 aaKnown RBP eCLIP13.83□□□□□ -0.2
VPS37C-204ENST00000538036 C21orf2O43822 256 aa13.82□□□□□ -0.2
VPS37C-204ENST00000538036 TBC1D9BQ66K14 1250 aa13.82□□□□□ -0.2
VPS37C-204ENST00000538036 CNKSR1Q969H4 720 aa13.82□□□□□ -0.2
VPS37C-204ENST00000538036 AFDNP55196 1824 aaKnown RBP13.82□□□□□ -0.2
VPS37C-204ENST00000538036 CARMIL3Q8ND23 1372 aa13.82□□□□□ -0.2
VPS37C-204ENST00000538036 DLEC1Q9Y238 1755 aa13.81□□□□□ -0.2
VPS37C-204ENST00000538036 PCNTO95613 3336 aa13.81□□□□□ -0.2
VPS37C-204ENST00000538036 CAPN15O75808 1086 aa13.81□□□□□ -0.2
VPS37C-204ENST00000538036 TEFQ10587 303 aa13.81□□□□□ -0.2
VPS37C-204ENST00000538036 STYK1Q6J9G0 422 aa13.81□□□□□ -0.2
VPS37C-204ENST00000538036 PRR5LQ6MZQ0 368 aa13.81□□□□□ -0.2
VPS37C-204ENST00000538036 CHADLQ6NUI6 762 aa13.81□□□□□ -0.2
VPS37C-204ENST00000538036 ZNF790Q6PG37 636 aa13.81□□□□□ -0.2
VPS37C-204ENST00000538036 GAS2L2Q8NHY3 880 aa13.81□□□□□ -0.2
VPS37C-204ENST00000538036 ZNF496Q96IT1 587 aaPredicted RBP13.81□□□□□ -0.2
VPS37C-204ENST00000538036 SETDB2Q96T68 719 aa13.81□□□□□ -0.2
VPS37C-204ENST00000538036 PCGF6Q9BYE7 350 aa13.81□□□□□ -0.2
VPS37C-204ENST00000538036 TAOK3Q9H2K8 898 aa13.81□□□□□ -0.2
VPS37C-204ENST00000538036 CREBZFQ9NS37 354 aa13.81□□□□□ -0.2
VPS37C-204ENST00000538036 HEG1Q9ULI3 1381 aa13.81□□□□□ -0.2
VPS37C-204ENST00000538036 GNAT3A8MTJ3 354 aa13.8□□□□□ -0.2
VPS37C-204ENST00000538036 TBC1D2BQ9UPU7 963 aa13.8□□□□□ -0.2
VPS37C-204ENST00000538036 NPHP1O15259 732 aa13.79□□□□□ -0.2
VPS37C-204ENST00000538036 SRGNP10124 158 aa13.79□□□□□ -0.2
VPS37C-204ENST00000538036 CNBD1Q8NA66 436 aa13.79□□□□□ -0.2
VPS37C-204ENST00000538036 IL17REQ8NFR9 667 aa13.79□□□□□ -0.2
VPS37C-204ENST00000538036 FMNL2Q96PY5 1086 aa13.79□□□□□ -0.2
VPS37C-204ENST00000538036 IQCA1LA6NCM1 817 aa13.78□□□□□ -0.2
VPS37C-204ENST00000538036 PER1O15534 1290 aaPredicted RBP13.78□□□□□ -0.2
VPS37C-204ENST00000538036 ST5P78524 1137 aa13.78□□□□□ -0.2
VPS37C-204ENST00000538036 MASTLQ96GX5 879 aa13.78□□□□□ -0.2
VPS37C-204ENST00000538036 CAMTA2O94983 1202 aa13.77□□□□□ -0.21
VPS37C-204ENST00000538036 PRPF40BQ6NWY9 871 aaKnown RBP13.77□□□□□ -0.21
VPS37C-204ENST00000538036 CLEC4GQ6UXB4 293 aa13.77□□□□□ -0.21
VPS37C-204ENST00000538036 UBR2Q8IWV8 1755 aa13.77□□□□□ -0.21
VPS37C-204ENST00000538036 ZNF219Q9P2Y4 722 aaPredicted RBP13.77□□□□□ -0.21
VPS37C-204ENST00000538036 ZNF330Q9Y3S2 320 aaPredicted RBP13.77□□□□□ -0.21
VPS37C-204ENST00000538036 TIAM2Q8IVF5 1701 aa13.76□□□□□ -0.21
VPS37C-204ENST00000538036 RGL2O15211 777 aa13.76□□□□□ -0.21
VPS37C-204ENST00000538036 DDNO94850 711 aaPredicted RBP13.76□□□□□ -0.21
VPS37C-204ENST00000538036 A1BGP04217 495 aa13.76□□□□□ -0.21
VPS37C-204ENST00000538036 LDHDQ86WU2 507 aa13.76□□□□□ -0.21
VPS37C-204ENST00000538036 L3MBTL3Q96JM7 780 aaPredicted RBP13.76□□□□□ -0.21
VPS37C-204ENST00000538036 KIF7Q2M1P5 1343 aa13.75□□□□□ -0.21
VPS37C-204ENST00000538036 DZIP3Q86Y13 1208 aaKnown RBP13.75□□□□□ -0.21
VPS37C-204ENST00000538036 CCDC24Q8N4L8 307 aa13.75□□□□□ -0.21
VPS37C-204ENST00000538036 CEMIPQ8WUJ3 1361 aa13.74□□□□□ -0.21
VPS37C-204ENST00000538036 NPC1L1Q9UHC9 1359 aa13.74□□□□□ -0.21
VPS37C-204ENST00000538036 BTBD11A6QL63 1104 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms