RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 TEFQ10587 303 aa23.78■■□□□ 1.4
CCDC61-201ENST00000536603 RTF1Q92541 710 aaKnown RBP23.78■■□□□ 1.4
CCDC61-201ENST00000536603 MAPK8IP3Q9UPT6 1336 aa23.78■■□□□ 1.4
CCDC61-201ENST00000536603 ADAMTS7Q9UKP4 1686 aa23.77■■□□□ 1.4
CCDC61-201ENST00000536603 MRC1P22897 1456 aa23.76■■□□□ 1.39
CCDC61-201ENST00000536603 SLC39A6Q13433 755 aa23.76■■□□□ 1.39
CCDC61-201ENST00000536603 ADAMTS8Q9UP79 889 aa23.76■■□□□ 1.39
CCDC61-201ENST00000536603 MYH14Q7Z406 1995 aaKnown RBP23.75■■□□□ 1.39
CCDC61-201ENST00000536603 HTATSF1O43719 755 aaKnown RBP23.75■■□□□ 1.39
CCDC61-201ENST00000536603 DCTN1Q14203 1278 aa23.75■■□□□ 1.39
CCDC61-201ENST00000536603 CCDC184Q52MB2 194 aa23.75■■□□□ 1.39
CCDC61-201ENST00000536603 MCM10Q7L590 875 aa23.75■■□□□ 1.39
CCDC61-201ENST00000536603 CRKLP46109 303 aaKnown RBP23.74■■□□□ 1.39
CCDC61-201ENST00000536603 NFE2L2Q16236 605 aa23.74■■□□□ 1.39
CCDC61-201ENST00000536603 CCDC146Q8IYE0 955 aa23.74■■□□□ 1.39
CCDC61-201ENST00000536603 CEMIPQ8WUJ3 1361 aa23.74■■□□□ 1.39
CCDC61-201ENST00000536603 TOMM70O94826 608 aa23.72■■□□□ 1.39
CCDC61-201ENST00000536603 DIEXFQ68CQ4 756 aaKnown RBP23.72■■□□□ 1.39
CCDC61-201ENST00000536603 PIM2Q9P1W9 311 aa23.72■■□□□ 1.39
CCDC61-201ENST00000536603 SRP68Q9UHB9 627 aaKnown RBP23.72■■□□□ 1.39
CCDC61-201ENST00000536603 BRCA1P38398 1863 aaKnown RBP23.71■■□□□ 1.39
CCDC61-201ENST00000536603 APLP1P51693 650 aa23.71■■□□□ 1.39
CCDC61-201ENST00000536603 RUNDC1Q96C34 613 aa23.7■■□□□ 1.38
CCDC61-201ENST00000536603 ARFGEF1Q9Y6D6 1849 aa23.69■■□□□ 1.38
CCDC61-201ENST00000536603 C9orf131Q5VYM1 1079 aa23.69■■□□□ 1.38
CCDC61-201ENST00000536603 C16orf71Q8IYS4 520 aaPredicted RBP23.69■■□□□ 1.38
CCDC61-201ENST00000536603 TTC5Q8N0Z6 440 aa23.69■■□□□ 1.38
CCDC61-201ENST00000536603 NMRK2Q9NPI5 230 aa23.69■■□□□ 1.38
CCDC61-201ENST00000536603 TJP1Q07157 1748 aa23.68■■□□□ 1.38
CCDC61-201ENST00000536603 USP42Q9H9J4 1324 aaKnown RBP23.68■■□□□ 1.38
CCDC61-201ENST00000536603 BTBD11A6QL63 1104 aa23.68■■□□□ 1.38
CCDC61-201ENST00000536603 RIPK4P57078 832 aa23.68■■□□□ 1.38
CCDC61-201ENST00000536603 FKBP8Q14318 412 aa23.68■■□□□ 1.38
CCDC61-201ENST00000536603 DALRD3Q5D0E6 543 aaKnown RBP23.68■■□□□ 1.38
CCDC61-201ENST00000536603 ZNF790Q6PG37 636 aa23.68■■□□□ 1.38
CCDC61-201ENST00000536603 DLG5Q8TDM6 1919 aa23.67■■□□□ 1.38
CCDC61-201ENST00000536603 ZPR1O75312 459 aa23.67■■□□□ 1.38
CCDC61-201ENST00000536603 KCNA3P22001 575 aa23.67■■□□□ 1.38
CCDC61-201ENST00000536603 TMPOP42166 694 aaKnown RBP23.67■■□□□ 1.38
CCDC61-201ENST00000536603 MRS2Q9HD23 443 aa23.67■■□□□ 1.38
CCDC61-201ENST00000536603 RRP7AQ9Y3A4 280 aaKnown RBP23.66■■□□□ 1.38
CCDC61-201ENST00000536603 SIPA1L3O60292 1781 aaPredicted RBP23.65■■□□□ 1.38
CCDC61-201ENST00000536603 DDR1Q08345 913 aa23.65■■□□□ 1.38
CCDC61-201ENST00000536603 NEUROD2Q15784 382 aa23.65■■□□□ 1.38
CCDC61-201ENST00000536603 DNAJC10Q8IXB1 793 aa23.65■■□□□ 1.38
CCDC61-201ENST00000536603 THUMPD2Q9BTF0 503 aaKnown RBP23.65■■□□□ 1.38
CCDC61-201ENST00000536603 KCNQ3O43525 872 aa23.64■■□□□ 1.37
CCDC61-201ENST00000536603 TAF7Q15545 349 aaPredicted RBP23.64■■□□□ 1.37
CCDC61-201ENST00000536603 INTS5Q6P9B9 1019 aaKnown RBP23.64■■□□□ 1.37
CCDC61-201ENST00000536603 ZNF496Q96IT1 587 aaPredicted RBP23.64■■□□□ 1.37
CCDC61-201ENST00000536603 KCPQ6ZWJ8 1503 aa23.64■■□□□ 1.37
CCDC61-201ENST00000536603 CHRNA5P30532 468 aa23.63■■□□□ 1.37
CCDC61-201ENST00000536603 VSIG10Q8N0Z9 540 aa23.63■■□□□ 1.37
CCDC61-201ENST00000536603 RNF181Q9P0P0 153 aa23.63■■□□□ 1.37
CCDC61-201ENST00000536603 USPL1Q5W0Q7 1092 aa23.62■■□□□ 1.37
CCDC61-201ENST00000536603 PNISRQ8TF01 805 aaKnown RBP23.62■■□□□ 1.37
CCDC61-201ENST00000536603 MIS18AQ9NYP9 233 aa23.62■■□□□ 1.37
CCDC61-201ENST00000536603 KDM2BQ8NHM5 1336 aa23.61■■□□□ 1.37
CCDC61-201ENST00000536603 POLRMTO00411 1230 aaKnown RBP23.61■■□□□ 1.37
CCDC61-201ENST00000536603 LMOD3Q0VAK6 560 aa23.6■■□□□ 1.37
CCDC61-201ENST00000536603 RBM46Q8TBY0 533 aaKnown RBP23.6■■□□□ 1.37
CCDC61-201ENST00000536603 FMNL2Q96PY5 1086 aa23.6■■□□□ 1.37
CCDC61-201ENST00000536603 TM4SF1P30408 202 aa23.59■■□□□ 1.37
CCDC61-201ENST00000536603 HEG1Q9ULI3 1381 aa23.59■■□□□ 1.37
CCDC61-201ENST00000536603 UBR2Q8IWV8 1755 aa23.59■■□□□ 1.37
CCDC61-201ENST00000536603 APAF1O14727 1248 aa23.58■■□□□ 1.37
CCDC61-201ENST00000536603 CYP19A1P11511 503 aaPredicted RBP23.58■■□□□ 1.37
CCDC61-201ENST00000536603 WDR90Q96KV7 1748 aa23.57■■□□□ 1.36
CCDC61-201ENST00000536603 RRAGCQ9HB90 399 aa23.57■■□□□ 1.36
CCDC61-201ENST00000536603 SOS1Q07889 1333 aaPredicted RBP23.57■■□□□ 1.36
CCDC61-201ENST00000536603 TRIM35Q9UPQ4 493 aa23.56■■□□□ 1.36
CCDC61-201ENST00000536603 SBF1O95248 1867 aa23.56■■□□□ 1.36
CCDC61-201ENST00000536603 COL15A1P39059 1388 aa23.55■■□□□ 1.36
CCDC61-201ENST00000536603 STARD3NLO95772 234 aa23.55■■□□□ 1.36
CCDC61-201ENST00000536603 DNAJC5GQ8N7S2 189 aa23.55■■□□□ 1.36
CCDC61-201ENST00000536603 TEX13AQ9BXU3 409 aaPredicted RBP23.55■■□□□ 1.36
CCDC61-201ENST00000536603 NARFQ9UHQ1 456 aa23.55■■□□□ 1.36
CCDC61-201ENST00000536603 AFDNP55196 1824 aaKnown RBP23.54■■□□□ 1.36
CCDC61-201ENST00000536603 FSTL1Q12841 308 aa23.54■■□□□ 1.36
CCDC61-201ENST00000536603 NFIXQ14938 502 aa23.54■■□□□ 1.36
CCDC61-201ENST00000536603 MIER1Q8N108 512 aa23.54■■□□□ 1.36
CCDC61-201ENST00000536603 ZBTB1Q9Y2K1 713 aa23.53■■□□□ 1.36
CCDC61-201ENST00000536603 TNRC6CQ9HCJ0 1690 aaKnown RBP23.53■■□□□ 1.36
CCDC61-201ENST00000536603 PRAMEF22A3QJZ6 481 aa23.52■■□□□ 1.36
CCDC61-201ENST00000536603 SERPINB2P05120 415 aa23.52■■□□□ 1.36
CCDC61-201ENST00000536603 SNRPA1P09661 255 aaKnown RBP23.52■■□□□ 1.36
CCDC61-201ENST00000536603 CANXP27824 592 aaKnown RBP23.52■■□□□ 1.36
CCDC61-201ENST00000536603 RASSF7Q02833 373 aa23.52■■□□□ 1.36
CCDC61-201ENST00000536603 HTRA3P83110 453 aa23.51■■□□□ 1.35
CCDC61-201ENST00000536603 TSPYL4Q9UJ04 414 aa23.51■■□□□ 1.35
CCDC61-201ENST00000536603 USP16Q9Y5T5 823 aa23.51■■□□□ 1.35
CCDC61-201ENST00000536603 BICDL1Q6ZP65 573 aa23.5■■□□□ 1.35
CCDC61-201ENST00000536603 FAM9BQ8IZU0 186 aa23.5■■□□□ 1.35
CCDC61-201ENST00000536603 EIF4A1P60842 406 aaKnown RBP23.49■■□□□ 1.35
CCDC61-201ENST00000536603 C2CD5Q86YS7 1000 aa23.49■■□□□ 1.35
CCDC61-201ENST00000536603 H0YIN7 160 aa23.48■■□□□ 1.35
CCDC61-201ENST00000536603 A1BGP04217 495 aa23.48■■□□□ 1.35
CCDC61-201ENST00000536603 TTLL6Q8N841 843 aa23.48■■□□□ 1.35
CCDC61-201ENST00000536603 BABAM1Q9NWV8 329 aa23.48■■□□□ 1.35
CCDC61-201ENST00000536603 LAS1LQ9Y4W2 734 aaKnown RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms