RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 STAP2Q9UGK3 403 aa21.81■■□□□ 1.08
RAB40C-203ENST00000535977 LMTK3Q96Q04 1460 aa21.8■■□□□ 1.08
RAB40C-203ENST00000535977 UBTFL1P0CB47 393 aaPredicted RBP21.8■■□□□ 1.08
RAB40C-203ENST00000535977 NUCB2P80303 420 aa21.8■■□□□ 1.08
RAB40C-203ENST00000535977 FOXD4L1Q9NU39 408 aa21.8■■□□□ 1.08
RAB40C-203ENST00000535977 AMOTQ4VCS5 1084 aa21.8■■□□□ 1.08
RAB40C-203ENST00000535977 RAB11FIP3O75154 756 aa21.79■■□□□ 1.08
RAB40C-203ENST00000535977 PLEKHO1Q53GL0 409 aaPredicted RBP21.79■■□□□ 1.08
RAB40C-203ENST00000535977 EXOC6BQ9Y2D4 811 aa21.79■■□□□ 1.08
RAB40C-203ENST00000535977 DDX49Q9Y6V7 483 aaKnown RBP21.79■■□□□ 1.08
RAB40C-203ENST00000535977 MED1Q15648 1581 aaPredicted RBP21.79■■□□□ 1.08
RAB40C-203ENST00000535977 MX1P20591 662 aa21.79■■□□□ 1.08
RAB40C-203ENST00000535977 AKAP4Q5JQC9 854 aa21.79■■□□□ 1.08
RAB40C-203ENST00000535977 SASS6Q6UVJ0 657 aa21.79■■□□□ 1.08
RAB40C-203ENST00000535977 USP44Q9H0E7 712 aa21.79■■□□□ 1.08
RAB40C-203ENST00000535977 CSPP1Q1MSJ5 1256 aa21.79■■□□□ 1.08
RAB40C-203ENST00000535977 KLHL40Q2TBA0 621 aa21.79■■□□□ 1.08
RAB40C-203ENST00000535977 ESCO1Q5FWF5 840 aa21.79■■□□□ 1.08
RAB40C-203ENST00000535977 NBPF6Q5VWK0 638 aa21.79■■□□□ 1.08
RAB40C-203ENST00000535977 NBPF4Q96M43 638 aa21.79■■□□□ 1.08
RAB40C-203ENST00000535977 EIF4A1P60842 406 aaKnown RBP21.78■■□□□ 1.08
RAB40C-203ENST00000535977 EPB41L2O43491 1005 aaKnown RBP21.78■■□□□ 1.08
RAB40C-203ENST00000535977 GTF2E1P29083 439 aaPredicted RBP21.78■■□□□ 1.08
RAB40C-203ENST00000535977 PNMA6EA0A0J9YXQ4 647 aa21.77■■□□□ 1.08
RAB40C-203ENST00000535977 SSFA2P28290 1259 aa21.77■■□□□ 1.08
RAB40C-203ENST00000535977 SSH3Q8TE77 659 aa21.77■■□□□ 1.08
RAB40C-203ENST00000535977 NECTIN2Q92692 538 aa21.77■■□□□ 1.08
RAB40C-203ENST00000535977 PDLIM2Q96JY6 352 aa21.77■■□□□ 1.08
RAB40C-203ENST00000535977 ZKSCAN5Q9Y2L8 839 aa21.77■■□□□ 1.08
RAB40C-203ENST00000535977 LRRFIP2Q9Y608 721 aaKnown RBP21.77■■□□□ 1.08
RAB40C-203ENST00000535977 USHBP1Q8N6Y0 703 aa21.77■■□□□ 1.07
RAB40C-203ENST00000535977 MCCP23508 829 aa21.76■■□□□ 1.07
RAB40C-203ENST00000535977 MCM2P49736 904 aa21.76■■□□□ 1.07
RAB40C-203ENST00000535977 NCAPD2Q15021 1401 aa21.76■■□□□ 1.07
RAB40C-203ENST00000535977 OVOS2A0A0G2JMS6 1433 aa21.75■■□□□ 1.07
RAB40C-203ENST00000535977 ZNF445P59923 1031 aa21.74■■□□□ 1.07
RAB40C-203ENST00000535977 TEFQ10587 303 aa21.74■■□□□ 1.07
RAB40C-203ENST00000535977 PPP4R3BQ5MIZ7 849 aa21.74■■□□□ 1.07
RAB40C-203ENST00000535977 RBSNQ9H1K0 784 aa21.74■■□□□ 1.07
RAB40C-203ENST00000535977 LMO7Q8WWI1 1683 aa21.74■■□□□ 1.07
RAB40C-203ENST00000535977 ANAPC15P60006 121 aa21.74■■□□□ 1.07
RAB40C-203ENST00000535977 ESYT1Q9BSJ8 1104 aa21.74■■□□□ 1.07
RAB40C-203ENST00000535977 KDM3BQ7LBC6 1761 aa21.73■■□□□ 1.07
RAB40C-203ENST00000535977 POLA2Q14181 598 aa21.73■■□□□ 1.07
RAB40C-203ENST00000535977 HDAC5Q9UQL6 1122 aa21.73■■□□□ 1.07
RAB40C-203ENST00000535977 NCLP19338 710 aaKnown RBP21.72■■□□□ 1.07
RAB40C-203ENST00000535977 HSP90AB4PQ58FF6 505 aa21.72■■□□□ 1.07
RAB40C-203ENST00000535977 ZNF530Q6P9A1 599 aaPredicted RBP21.72■■□□□ 1.07
RAB40C-203ENST00000535977 ARHGEF25Q86VW2 580 aa21.72■■□□□ 1.07
RAB40C-203ENST00000535977 BCL11BQ9C0K0 894 aaPredicted RBP21.72■■□□□ 1.07
RAB40C-203ENST00000535977 PHAXQ9H814 394 aaKnown RBP21.72■■□□□ 1.07
RAB40C-203ENST00000535977 LGR6Q9HBX8 967 aa21.72■■□□□ 1.07
RAB40C-203ENST00000535977 DNAAF4Q8WXU2 420 aa21.71■■□□□ 1.07
RAB40C-203ENST00000535977 SLIT3O75094 1523 aa21.71■■□□□ 1.07
RAB40C-203ENST00000535977 BTBD11A6QL63 1104 aa21.71■■□□□ 1.07
RAB40C-203ENST00000535977 GCP02774 474 aa21.71■■□□□ 1.07
RAB40C-203ENST00000535977 C1orf141Q5JVX7 400 aa21.71■■□□□ 1.07
RAB40C-203ENST00000535977 TUBGCP6Q96RT7 1819 aa21.71■■□□□ 1.07
RAB40C-203ENST00000535977 NPHP4O75161 1426 aaPredicted RBP21.71■■□□□ 1.07
RAB40C-203ENST00000535977 BAG4O95429 457 aaKnown RBP21.71■■□□□ 1.07
RAB40C-203ENST00000535977 IL17RAQ96F46 866 aa21.71■■□□□ 1.07
RAB40C-203ENST00000535977 EIF2S2P20042 333 aaKnown RBP21.7■■□□□ 1.06
RAB40C-203ENST00000535977 CHMLP26374 656 aa21.7■■□□□ 1.06
RAB40C-203ENST00000535977 ZSCAN23Q3MJ62 389 aa21.7■■□□□ 1.06
RAB40C-203ENST00000535977 MCM5P33992 734 aa21.7■■□□□ 1.06
RAB40C-203ENST00000535977 CAVIN1Q6NZI2 390 aaKnown RBP21.7■■□□□ 1.06
RAB40C-203ENST00000535977 KIF1BPQ96EK5 621 aa21.69■■□□□ 1.06
RAB40C-203ENST00000535977 GTPBP4Q9BZE4 634 aaKnown RBP21.69■■□□□ 1.06
RAB40C-203ENST00000535977 TRIM6-TRIM34B2RNG4 842 aa21.69■■□□□ 1.06
RAB40C-203ENST00000535977 CYP2E1P05181 493 aaPredicted RBP21.69■■□□□ 1.06
RAB40C-203ENST00000535977 CBX1P83916 185 aa21.69■■□□□ 1.06
RAB40C-203ENST00000535977 BEND3Q5T5X7 828 aa21.69■■□□□ 1.06
RAB40C-203ENST00000535977 PPP1R42Q7Z4L9 355 aa21.69■■□□□ 1.06
RAB40C-203ENST00000535977 JARID2Q92833 1246 aaPredicted RBP21.69■■□□□ 1.06
RAB40C-203ENST00000535977 DBF4Q9UBU7 674 aaPredicted RBP21.69■■□□□ 1.06
RAB40C-203ENST00000535977 RNMTO43148 476 aaKnown RBP21.68■■□□□ 1.06
RAB40C-203ENST00000535977 CHPF2Q9P2E5 772 aa21.68■■□□□ 1.06
RAB40C-203ENST00000535977 KIF20AO95235 890 aa21.67■■□□□ 1.06
RAB40C-203ENST00000535977 RILPL2Q969X0 211 aa21.67■■□□□ 1.06
RAB40C-203ENST00000535977 SURF6O75683 361 aaKnown RBP21.67■■□□□ 1.06
RAB40C-203ENST00000535977 PRIM1P49642 420 aaKnown RBP21.66■■□□□ 1.06
RAB40C-203ENST00000535977 PI4KAP2A4QPH2 592 aa21.66■■□□□ 1.06
RAB40C-203ENST00000535977 ALDH1L1O75891 902 aa21.66■■□□□ 1.06
RAB40C-203ENST00000535977 PI4KAP1Q8N8J0 262 aa21.66■■□□□ 1.06
RAB40C-203ENST00000535977 RHPN1Q8TCX5 695 aa21.66■■□□□ 1.06
RAB40C-203ENST00000535977 ZBTB7CA1YPR0 619 aa21.65■■□□□ 1.06
RAB40C-203ENST00000535977 TSC1Q92574 1164 aa21.65■■□□□ 1.06
RAB40C-203ENST00000535977 SRGAP3O43295 1099 aa21.64■■□□□ 1.06
RAB40C-203ENST00000535977 ZNF710Q8N1W2 664 aa21.64■■□□□ 1.06
RAB40C-203ENST00000535977 ANKRD24Q8TF21 1146 aa21.64■■□□□ 1.06
RAB40C-203ENST00000535977 LRRC59Q96AG4 307 aaKnown RBP21.64■■□□□ 1.06
RAB40C-203ENST00000535977 NEK4P51957 841 aa21.64■■□□□ 1.05
RAB40C-203ENST00000535977 MTX1Q13505 466 aa21.64■■□□□ 1.05
RAB40C-203ENST00000535977 MCTP1Q6DN14 999 aa21.64■■□□□ 1.05
RAB40C-203ENST00000535977 MYRIPQ8NFW9 859 aa21.64■■□□□ 1.05
RAB40C-203ENST00000535977 CCDC39Q9UFE4 941 aa21.64■■□□□ 1.05
RAB40C-203ENST00000535977 MST1RQ04912 1400 aa21.64■■□□□ 1.05
RAB40C-203ENST00000535977 HEG1Q9ULI3 1381 aa21.64■■□□□ 1.05
RAB40C-203ENST00000535977 RBM33Q96EV2 1170 aaKnown RBP21.64■■□□□ 1.05
RAB40C-203ENST00000535977 NAP1L2Q9ULW6 460 aaPredicted RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms