RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 COG6Q9Y2V7 657 aa29.17■■■□□ 2.26
RBFOX1-206ENST00000535565 NHSQ6T4R5 1651 aa29.17■■■□□ 2.26
RBFOX1-206ENST00000535565 FLIIQ13045 1269 aa29.15■■■□□ 2.26
RBFOX1-206ENST00000535565 VSIG10Q8N0Z9 540 aa29.15■■■□□ 2.26
RBFOX1-206ENST00000535565 SBF2Q86WG5 1849 aa29.14■■■□□ 2.25
RBFOX1-206ENST00000535565 MVPQ14764 893 aaKnown RBP29.13■■■□□ 2.25
RBFOX1-206ENST00000535565 G2E3Q7L622 706 aa29.13■■■□□ 2.25
RBFOX1-206ENST00000535565 ABCC4O15439 1325 aa29.13■■■□□ 2.25
RBFOX1-206ENST00000535565 ILDR1Q86SU0 546 aaPredicted RBP29.13■■■□□ 2.25
RBFOX1-206ENST00000535565 USP16Q9Y5T5 823 aa29.13■■■□□ 2.25
RBFOX1-206ENST00000535565 RBM42Q9BTD8 480 aaKnown RBP29.12■■■□□ 2.25
RBFOX1-206ENST00000535565 TEX13AQ9BXU3 409 aaPredicted RBP29.12■■■□□ 2.25
RBFOX1-206ENST00000535565 DDX21Q9NR30 783 aaKnown RBP eCLIP29.12■■■□□ 2.25
RBFOX1-206ENST00000535565 HYPKQ9NX55 129 aa29.12■■■□□ 2.25
RBFOX1-206ENST00000535565 FKBP5Q13451 457 aaPredicted RBP29.11■■■□□ 2.25
RBFOX1-206ENST00000535565 ITPRIPQ8IWB1 547 aa29.11■■■□□ 2.25
RBFOX1-206ENST00000535565 TMEM57Q8N5G2 664 aa29.11■■■□□ 2.25
RBFOX1-206ENST00000535565 RGS12O14924 1447 aa29.11■■■□□ 2.25
RBFOX1-206ENST00000535565 ERBB4Q15303 1308 aa29.1■■■□□ 2.25
RBFOX1-206ENST00000535565 KCNQ2O43526 872 aa29.09■■■□□ 2.25
RBFOX1-206ENST00000535565 AAMPQ13685 434 aa29.09■■■□□ 2.25
RBFOX1-206ENST00000535565 SMARCC1Q92922 1105 aaPredicted RBP29.09■■■□□ 2.25
RBFOX1-206ENST00000535565 DDX19BQ9UMR2 479 aa29.09■■■□□ 2.25
RBFOX1-206ENST00000535565 BTAF1O14981 1849 aa29.09■■■□□ 2.25
RBFOX1-206ENST00000535565 RXRBP28702 533 aa29.09■■■□□ 2.25
RBFOX1-206ENST00000535565 PHAXQ9H814 394 aaKnown RBP29.09■■■□□ 2.25
RBFOX1-206ENST00000535565 KRT27Q7Z3Y8 459 aa29.08■■■□□ 2.25
RBFOX1-206ENST00000535565 N4BP2Q86UW6 1770 aaPredicted RBP29.07■■■□□ 2.24
RBFOX1-206ENST00000535565 TJP1Q07157 1748 aa29.07■■■□□ 2.24
RBFOX1-206ENST00000535565 ANXA1P04083 346 aa29.07■■■□□ 2.24
RBFOX1-206ENST00000535565 FAM182BQ5T319 152 aa29.07■■■□□ 2.24
RBFOX1-206ENST00000535565 PDIA6Q15084 440 aa29.06■■■□□ 2.24
RBFOX1-206ENST00000535565 CICQ96RK0 1608 aaPredicted RBP29.06■■■□□ 2.24
RBFOX1-206ENST00000535565 PALLDQ8WX93 1383 aa29.06■■■□□ 2.24
RBFOX1-206ENST00000535565 PROSER3Q2NL68 480 aa29.05■■■□□ 2.24
RBFOX1-206ENST00000535565 CHMP4BQ9H444 224 aaKnown RBP29.05■■■□□ 2.24
RBFOX1-206ENST00000535565 PXDNLA1KZ92 1463 aa29.05■■■□□ 2.24
RBFOX1-206ENST00000535565 STARD3NLO95772 234 aa29.05■■■□□ 2.24
RBFOX1-206ENST00000535565 CCDC136Q96JN2 1154 aa29.05■■■□□ 2.24
RBFOX1-206ENST00000535565 ZNF831Q5JPB2 1677 aa29.04■■■□□ 2.24
RBFOX1-206ENST00000535565 MYL6BP14649 208 aa29.04■■■□□ 2.24
RBFOX1-206ENST00000535565 INTS3Q68E01 1043 aaKnown RBP29.03■■■□□ 2.24
RBFOX1-206ENST00000535565 FAM196AQ6ZSG2 479 aa29.03■■■□□ 2.24
RBFOX1-206ENST00000535565 DNAJC10Q8IXB1 793 aa29.03■■■□□ 2.24
RBFOX1-206ENST00000535565 DDX58O95786 925 aaKnown RBP29.02■■■□□ 2.24
RBFOX1-206ENST00000535565 F6X3S4 739 aa29.01■■■□□ 2.24
RBFOX1-206ENST00000535565 CCT4P50991 539 aaKnown RBP29.01■■■□□ 2.24
RBFOX1-206ENST00000535565 SLC4A10Q6U841 1118 aa29.01■■■□□ 2.24
RBFOX1-206ENST00000535565 RGS17Q9UGC6 210 aaPredicted RBP29.01■■■□□ 2.24
RBFOX1-206ENST00000535565 LOC102724428A0A0B4J2F2 783 aa29■■■□□ 2.23
RBFOX1-206ENST00000535565 SIK1P57059 783 aa29■■■□□ 2.23
RBFOX1-206ENST00000535565 B4GALNT3Q6L9W6 998 aa29■■■□□ 2.23
RBFOX1-206ENST00000535565 SLC4A9Q96Q91 983 aa29■■■□□ 2.23
RBFOX1-206ENST00000535565 A1BGP04217 495 aa28.98■■■□□ 2.23
RBFOX1-206ENST00000535565 ATP6V1AP38606 617 aa28.97■■■□□ 2.23
RBFOX1-206ENST00000535565 AIMP1Q12904 312 aaKnown RBP28.97■■■□□ 2.23
RBFOX1-206ENST00000535565 PI4KAP2A4QPH2 592 aa28.96■■■□□ 2.23
RBFOX1-206ENST00000535565 NBPF26B4DH59 902 aa28.96■■■□□ 2.23
RBFOX1-206ENST00000535565 PIP4K2AP48426 406 aaPredicted RBP28.96■■■□□ 2.23
RBFOX1-206ENST00000535565 NBPF14Q5TI25 921 aa28.96■■■□□ 2.23
RBFOX1-206ENST00000535565 NBPF10Q6P3W6 841 aaKnown RBP28.96■■■□□ 2.23
RBFOX1-206ENST00000535565 KSR2Q6VAB6 950 aa28.96■■■□□ 2.23
RBFOX1-206ENST00000535565 LRP10Q7Z4F1 713 aa28.96■■■□□ 2.23
RBFOX1-206ENST00000535565 NBPF15Q8N660 670 aa28.96■■■□□ 2.23
RBFOX1-206ENST00000535565 PI4KAP1Q8N8J0 262 aa28.96■■■□□ 2.23
RBFOX1-206ENST00000535565 XAGE3Q8WTP9 111 aa28.96■■■□□ 2.23
RBFOX1-206ENST00000535565 DNAAF4Q8WXU2 420 aa28.96■■■□□ 2.23
RBFOX1-206ENST00000535565 BCL11BQ9C0K0 894 aaPredicted RBP28.96■■■□□ 2.23
RBFOX1-206ENST00000535565 ADCY9O60503 1353 aa28.96■■■□□ 2.23
RBFOX1-206ENST00000535565 CYP19A1P11511 503 aaPredicted RBP28.96■■■□□ 2.23
RBFOX1-206ENST00000535565 POTEAQ6S8J7 498 aa28.96■■■□□ 2.23
RBFOX1-206ENST00000535565 COPS6Q7L5N1 327 aa28.96■■■□□ 2.23
RBFOX1-206ENST00000535565 LY75O60449 1722 aa28.95■■■□□ 2.23
RBFOX1-206ENST00000535565 PTF1AQ7RTS3 328 aa28.95■■■□□ 2.22
RBFOX1-206ENST00000535565 COL5A3P25940 1745 aaPredicted RBP28.95■■■□□ 2.22
RBFOX1-206ENST00000535565 ZBTB7BO15156 539 aaPredicted RBP28.94■■■□□ 2.22
RBFOX1-206ENST00000535565 ARFGEF2Q9Y6D5 1785 aa28.93■■■□□ 2.22
RBFOX1-206ENST00000535565 ZBTB40Q9NUA8 1239 aa28.93■■■□□ 2.22
RBFOX1-206ENST00000535565 MAP3K2Q9Y2U5 619 aa28.93■■■□□ 2.22
RBFOX1-206ENST00000535565 ATP10DQ9P241 1426 aa28.93■■■□□ 2.22
RBFOX1-206ENST00000535565 RREB1Q92766 1687 aa28.92■■■□□ 2.22
RBFOX1-206ENST00000535565 RIC3Q7Z5B4 369 aa28.92■■■□□ 2.22
RBFOX1-206ENST00000535565 ANKRD13DQ6ZTN6 518 aa28.91■■■□□ 2.22
RBFOX1-206ENST00000535565 SRCIN1Q9C0H9 1055 aa28.9■■■□□ 2.22
RBFOX1-206ENST00000535565 NUP188Q5SRE5 1749 aa28.89■■■□□ 2.22
RBFOX1-206ENST00000535565 ITPK1Q13572 414 aa28.88■■■□□ 2.21
RBFOX1-206ENST00000535565 PLBD2Q8NHP8 589 aa28.88■■■□□ 2.21
RBFOX1-206ENST00000535565 NEXNQ0ZGT2 675 aa28.87■■■□□ 2.21
RBFOX1-206ENST00000535565 BEND3Q5T5X7 828 aa28.87■■■□□ 2.21
RBFOX1-206ENST00000535565 CCDC87Q9NVE4 849 aa28.87■■■□□ 2.21
RBFOX1-206ENST00000535565 ZBTB1Q9Y2K1 713 aa28.87■■■□□ 2.21
RBFOX1-206ENST00000535565 ZNF330Q9Y3S2 320 aaPredicted RBP28.87■■■□□ 2.21
RBFOX1-206ENST00000535565 TRIM37O94972 964 aa28.86■■■□□ 2.21
RBFOX1-206ENST00000535565 CRKLP46109 303 aaKnown RBP28.86■■■□□ 2.21
RBFOX1-206ENST00000535565 NPM2Q86SE8 214 aaKnown RBP28.86■■■□□ 2.21
RBFOX1-206ENST00000535565 AFDNP55196 1824 aaKnown RBP28.85■■■□□ 2.21
RBFOX1-206ENST00000535565 TAF1LQ8IZX4 1826 aa28.85■■■□□ 2.21
RBFOX1-206ENST00000535565 IL6STP40189 918 aaPredicted RBP28.85■■■□□ 2.21
RBFOX1-206ENST00000535565 METTL22Q9BUU2 404 aaPredicted RBP28.84■■■□□ 2.21
RBFOX1-206ENST00000535565 CCNL1Q9UK58 526 aaPredicted RBP28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms