RNA–Protein interactions for RNA: ENST00000535459.5

SOD2-208, Transcript of superoxide dismutase 2, humanhuman

TSL 2

Gene SOD2, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-208ENST00000535459 SSFA2P28290 1259 aa16.21■□□□□ 0.19
SOD2-208ENST00000535459 RTCBQ9Y3I0 505 aaKnown RBP16.21■□□□□ 0.19
SOD2-208ENST00000535459 USP16Q9Y5T5 823 aa16.21■□□□□ 0.19
SOD2-208ENST00000535459 A1BGP04217 495 aa16.2■□□□□ 0.18
SOD2-208ENST00000535459 CANXP27824 592 aaKnown RBP16.2■□□□□ 0.18
SOD2-208ENST00000535459 TRAPPC3LQ5T215 181 aa16.2■□□□□ 0.18
SOD2-208ENST00000535459 PNISRQ8TF01 805 aaKnown RBP16.2■□□□□ 0.18
SOD2-208ENST00000535459 CCDC87Q9NVE4 849 aa16.2■□□□□ 0.18
SOD2-208ENST00000535459 KLHL34Q8N239 644 aa16.19■□□□□ 0.18
SOD2-208ENST00000535459 SLC16A10Q8TF71 515 aa16.19■□□□□ 0.18
SOD2-208ENST00000535459 FMNL2Q96PY5 1086 aa16.19■□□□□ 0.18
SOD2-208ENST00000535459 ARXQ96QS3 562 aa16.19■□□□□ 0.18
SOD2-208ENST00000535459 FHDC1Q9C0D6 1143 aaPredicted RBP16.19■□□□□ 0.18
SOD2-208ENST00000535459 VSIG10Q8N0Z9 540 aa16.18■□□□□ 0.18
SOD2-208ENST00000535459 FLAD1Q8NFF5 587 aa16.17■□□□□ 0.18
SOD2-208ENST00000535459 SOS1Q07889 1333 aaPredicted RBP16.17■□□□□ 0.18
SOD2-208ENST00000535459 GOLGB1Q14789 3259 aaKnown RBP16.16■□□□□ 0.18
SOD2-208ENST00000535459 KRT24Q2M2I5 525 aa16.16■□□□□ 0.18
SOD2-208ENST00000535459 ZNF330Q9Y3S2 320 aaPredicted RBP16.16■□□□□ 0.18
SOD2-208ENST00000535459 LAS1LQ9Y4W2 734 aaKnown RBP16.16■□□□□ 0.18
SOD2-208ENST00000535459 LAMB4A4D0S4 1761 aa16.15■□□□□ 0.18
SOD2-208ENST00000535459 GYS1P13807 737 aa16.15■□□□□ 0.18
SOD2-208ENST00000535459 RFC4P35249 363 aa16.15■□□□□ 0.18
SOD2-208ENST00000535459 EIF4A1P60842 406 aaKnown RBP16.15■□□□□ 0.18
SOD2-208ENST00000535459 SYT17Q9BSW7 474 aa16.15■□□□□ 0.18
SOD2-208ENST00000535459 UTRNP46939 3433 aa16.15■□□□□ 0.18
SOD2-208ENST00000535459 POLD1P28340 1107 aa16.14■□□□□ 0.17
SOD2-208ENST00000535459 FKBP8Q14318 412 aa16.14■□□□□ 0.17
SOD2-208ENST00000535459 FAM9BQ8IZU0 186 aa16.14■□□□□ 0.17
SOD2-208ENST00000535459 NLGN2Q8NFZ4 835 aa16.14■□□□□ 0.17
SOD2-208ENST00000535459 TSPYL4Q9UJ04 414 aa16.14■□□□□ 0.17
SOD2-208ENST00000535459 SALL2Q9Y467 1007 aaPredicted RBP16.14■□□□□ 0.17
SOD2-208ENST00000535459 COL15A1P39059 1388 aa16.13■□□□□ 0.17
SOD2-208ENST00000535459 AFDNP55196 1824 aaKnown RBP16.13■□□□□ 0.17
SOD2-208ENST00000535459 STARD3NLO95772 234 aa16.13■□□□□ 0.17
SOD2-208ENST00000535459 SNRPA1P09661 255 aaKnown RBP16.13■□□□□ 0.17
SOD2-208ENST00000535459 USPL1Q5W0Q7 1092 aa16.13■□□□□ 0.17
SOD2-208ENST00000535459 BCL2L12Q9HB09 334 aa16.13■□□□□ 0.17
SOD2-208ENST00000535459 NBPF26B4DH59 902 aa16.12■□□□□ 0.17
SOD2-208ENST00000535459 MMP10P09238 476 aa16.12■□□□□ 0.17
SOD2-208ENST00000535459 EIF5P55010 431 aaKnown RBP16.12■□□□□ 0.17
SOD2-208ENST00000535459 NBPF10Q6P3W6 841 aaKnown RBP16.12■□□□□ 0.17
SOD2-208ENST00000535459 NBPF15Q8N660 670 aa16.12■□□□□ 0.17
SOD2-208ENST00000535459 TBC1D2BQ9UPU7 963 aa16.12■□□□□ 0.17
SOD2-208ENST00000535459 USP42Q9H9J4 1324 aaKnown RBP16.12■□□□□ 0.17
SOD2-208ENST00000535459 N4BP2Q86UW6 1770 aaPredicted RBP16.11■□□□□ 0.17
SOD2-208ENST00000535459 GIGYF1O75420 1035 aaPredicted RBP16.11■□□□□ 0.17
SOD2-208ENST00000535459 HMGB2P26583 209 aaKnown RBP16.11■□□□□ 0.17
SOD2-208ENST00000535459 WWC3Q9ULE0 1092 aa16.11■□□□□ 0.17
SOD2-208ENST00000535459 LMOD3Q0VAK6 560 aa16.1■□□□□ 0.17
SOD2-208ENST00000535459 NECTIN2Q92692 538 aa16.1■□□□□ 0.17
SOD2-208ENST00000535459 BCORQ6W2J9 1755 aa16.1■□□□□ 0.17
SOD2-208ENST00000535459 CHL1O00533 1208 aa16.09■□□□□ 0.17
SOD2-208ENST00000535459 ANXA1P04083 346 aa16.09■□□□□ 0.17
SOD2-208ENST00000535459 DDR1Q08345 913 aa16.09■□□□□ 0.17
SOD2-208ENST00000535459 NGEFQ8N5V2 710 aa16.09■□□□□ 0.17
SOD2-208ENST00000535459 TEX13AQ9BXU3 409 aaPredicted RBP16.09■□□□□ 0.17
SOD2-208ENST00000535459 NARFQ9UHQ1 456 aa16.09■□□□□ 0.17
SOD2-208ENST00000535459 SCN7AQ01118 1682 aa16.08■□□□□ 0.17
SOD2-208ENST00000535459 ZPR1O75312 459 aa16.08■□□□□ 0.16
SOD2-208ENST00000535459 MBIPQ9NS73 344 aa16.08■□□□□ 0.16
SOD2-208ENST00000535459 KIAA1551Q9HCM1 1747 aa16.08■□□□□ 0.16
SOD2-208ENST00000535459 KIF13BQ9NQT8 1826 aa16.08■□□□□ 0.16
SOD2-208ENST00000535459 EIF2S2P20042 333 aaKnown RBP16.07■□□□□ 0.16
SOD2-208ENST00000535459 PROSER3Q2NL68 480 aa16.07■□□□□ 0.16
SOD2-208ENST00000535459 BICDL1Q6ZP65 573 aa16.07■□□□□ 0.16
SOD2-208ENST00000535459 NLGN1Q8N2Q7 840 aa16.07■□□□□ 0.16
SOD2-208ENST00000535459 NUP98P52948 1817 aa16.06■□□□□ 0.16
SOD2-208ENST00000535459 ZNF853P0CG23 659 aa16.06■□□□□ 0.16
SOD2-208ENST00000535459 MYL6BP14649 208 aa16.06■□□□□ 0.16
SOD2-208ENST00000535459 TM4SF1P30408 202 aa16.06■□□□□ 0.16
SOD2-208ENST00000535459 IL6STP40189 918 aaPredicted RBP16.06■□□□□ 0.16
SOD2-208ENST00000535459 NFIXQ14938 502 aa16.06■□□□□ 0.16
SOD2-208ENST00000535459 CAMTA2O94983 1202 aa16.05■□□□□ 0.16
SOD2-208ENST00000535459 TBC1D9BQ66K14 1250 aa16.05■□□□□ 0.16
SOD2-208ENST00000535459 CCDC24Q8N4L8 307 aa16.05■□□□□ 0.16
SOD2-208ENST00000535459 POLRMTO00411 1230 aaKnown RBP16.04■□□□□ 0.16
SOD2-208ENST00000535459 ELL2O00472 640 aaPredicted RBP16.04■□□□□ 0.16
SOD2-208ENST00000535459 PDIA6Q15084 440 aa16.04■□□□□ 0.16
SOD2-208ENST00000535459 TTLL7Q6ZT98 887 aa16.04■□□□□ 0.16
SOD2-208ENST00000535459 DZIP3Q86Y13 1208 aaKnown RBP16.04■□□□□ 0.16
SOD2-208ENST00000535459 WWC1Q8IX03 1113 aa16.04■□□□□ 0.16
SOD2-208ENST00000535459 PELP1Q8IZL8 1130 aaKnown RBP16.04■□□□□ 0.16
SOD2-208ENST00000535459 MIER1Q8N108 512 aa16.04■□□□□ 0.16
SOD2-208ENST00000535459 TSR2Q969E8 191 aaKnown RBP16.04■□□□□ 0.16
SOD2-208ENST00000535459 CFAP44Q96MT7 982 aa16.04■□□□□ 0.16
SOD2-208ENST00000535459 PARP3Q9Y6F1 533 aa16.04■□□□□ 0.16
SOD2-208ENST00000535459 HLFQ16534 295 aa16.03■□□□□ 0.16
SOD2-208ENST00000535459 DIEXFQ68CQ4 756 aaKnown RBP16.03■□□□□ 0.16
SOD2-208ENST00000535459 ANKRD31Q8N7Z5 1873 aa16.03■□□□□ 0.16
SOD2-208ENST00000535459 NRXN2Q9P2S2 1712 aa16.02■□□□□ 0.16
SOD2-208ENST00000535459 YBX3P16989 372 aaKnown RBP eCLIP16.02■□□□□ 0.168e-7■□□□□ 8.9
SOD2-208ENST00000535459 SPINK5Q9NQ38 1064 aaPredicted RBP16.02■□□□□ 0.16
SOD2-208ENST00000535459 BABAM1Q9NWV8 329 aa16.02■□□□□ 0.16
SOD2-208ENST00000535459 A0A087WZG4 1122 aa16.01■□□□□ 0.15
SOD2-208ENST00000535459 DUSP27Q5VZP5 1158 aa16.01■□□□□ 0.15
SOD2-208ENST00000535459 LRP10Q7Z4F1 713 aa16.01■□□□□ 0.15
SOD2-208ENST00000535459 TSPYL6Q8N831 410 aa16.01■□□□□ 0.15
SOD2-208ENST00000535459 C8orf58Q8NAV2 365 aa16.01■□□□□ 0.15
SOD2-208ENST00000535459 IFT57Q9NWB7 429 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms