RNA–Protein interactions for RNA: ENST00000534692.1

CKLF-207, Transcript of chemokine like factor, humanhuman

TSL 3

Gene CKLF, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-207ENST00000534692 STARD3NLO95772 234 aa30.06■■■□□ 2.4
CKLF-207ENST00000534692 TRAPPC3LQ5T215 181 aa30.06■■■□□ 2.4
CKLF-207ENST00000534692 BABAM1Q9NWV8 329 aa30.06■■■□□ 2.4
CKLF-207ENST00000534692 SNRPA1P09661 255 aaKnown RBP30.04■■■□□ 2.4
CKLF-207ENST00000534692 ARHGEF1Q92888 912 aaKnown RBP30.04■■■□□ 2.4
CKLF-207ENST00000534692 SOS1Q07889 1333 aaPredicted RBP30.03■■■□□ 2.4
CKLF-207ENST00000534692 ZBTB1Q9Y2K1 713 aa30.03■■■□□ 2.4
CKLF-207ENST00000534692 PPP1R1BQ9UD71 204 aaPredicted RBP30.02■■■□□ 2.4
CKLF-207ENST00000534692 EIF4A1P60842 406 aaKnown RBP30.01■■■□□ 2.39
CKLF-207ENST00000534692 TSPYL4Q9UJ04 414 aa30.01■■■□□ 2.39
CKLF-207ENST00000534692 POLD1P28340 1107 aa30■■■□□ 2.39
CKLF-207ENST00000534692 PRAMEF22A3QJZ6 481 aa29.99■■■□□ 2.39
CKLF-207ENST00000534692 MSL1Q68DK7 614 aa29.99■■■□□ 2.39
CKLF-207ENST00000534692 USP16Q9Y5T5 823 aa29.99■■■□□ 2.39
CKLF-207ENST00000534692 RFC4P35249 363 aa29.98■■■□□ 2.39
CKLF-207ENST00000534692 COL15A1P39059 1388 aa29.98■■■□□ 2.39
CKLF-207ENST00000534692 CHL1O00533 1208 aa29.97■■■□□ 2.39
CKLF-207ENST00000534692 NCBP3Q53F19 620 aaKnown RBP29.97■■■□□ 2.39
CKLF-207ENST00000534692 ARXQ96QS3 562 aa29.97■■■□□ 2.39
CKLF-207ENST00000534692 GIGYF1O75420 1035 aaPredicted RBP29.96■■■□□ 2.39
CKLF-207ENST00000534692 CANXP27824 592 aaKnown RBP29.96■■■□□ 2.39
CKLF-207ENST00000534692 USP42Q9H9J4 1324 aaKnown RBP29.96■■■□□ 2.39
CKLF-207ENST00000534692 EIF5P55010 431 aaKnown RBP29.95■■■□□ 2.39
CKLF-207ENST00000534692 CCDC27Q2M243 656 aa29.95■■■□□ 2.39
CKLF-207ENST00000534692 FAM9BQ8IZU0 186 aa29.95■■■□□ 2.39
CKLF-207ENST00000534692 CCER2I3L3R5 266 aa29.94■■■□□ 2.38
CKLF-207ENST00000534692 A1BGP04217 495 aa29.94■■■□□ 2.38
CKLF-207ENST00000534692 GYS1P13807 737 aa29.94■■■□□ 2.38
CKLF-207ENST00000534692 IL6STP40189 918 aaPredicted RBP29.93■■■□□ 2.38
CKLF-207ENST00000534692 CALD1Q05682 793 aaKnown RBP29.93■■■□□ 2.38
CKLF-207ENST00000534692 DIEXFQ68CQ4 756 aaKnown RBP29.93■■■□□ 2.38
CKLF-207ENST00000534692 CFAP44Q96MT7 982 aa29.93■■■□□ 2.38
CKLF-207ENST00000534692 NLGN1Q8N2Q7 840 aa29.92■■■□□ 2.38
CKLF-207ENST00000534692 SRP68Q9UHB9 627 aaKnown RBP29.92■■■□□ 2.38
CKLF-207ENST00000534692 ZNF853P0CG23 659 aa29.91■■■□□ 2.38
CKLF-207ENST00000534692 SCN7AQ01118 1682 aa29.91■■■□□ 2.38
CKLF-207ENST00000534692 IFT57Q9NWB7 429 aa29.9■■■□□ 2.38
CKLF-207ENST00000534692 NARFQ9UHQ1 456 aa29.9■■■□□ 2.38
CKLF-207ENST00000534692 A0A087WZG4 1122 aa29.89■■■□□ 2.38
CKLF-207ENST00000534692 LAS1LQ9Y4W2 734 aaKnown RBP29.89■■■□□ 2.38
CKLF-207ENST00000534692 BCORQ6W2J9 1755 aa29.88■■■□□ 2.37
CKLF-207ENST00000534692 ZPR1O75312 459 aa29.88■■■□□ 2.37
CKLF-207ENST00000534692 FHDC1Q9C0D6 1143 aaPredicted RBP29.88■■■□□ 2.37
CKLF-207ENST00000534692 GNAI1P63096 354 aa29.87■■■□□ 2.37
CKLF-207ENST00000534692 WWC1Q8IX03 1113 aa29.87■■■□□ 2.37
CKLF-207ENST00000534692 NBPF26B4DH59 902 aa29.86■■■□□ 2.37
CKLF-207ENST00000534692 NBPF10Q6P3W6 841 aaKnown RBP29.86■■■□□ 2.37
CKLF-207ENST00000534692 NBPF15Q8N660 670 aa29.86■■■□□ 2.37
CKLF-207ENST00000534692 MMP10P09238 476 aa29.85■■■□□ 2.37
CKLF-207ENST00000534692 FKBP8Q14318 412 aa29.85■■■□□ 2.37
CKLF-207ENST00000534692 USPL1Q5W0Q7 1092 aa29.85■■■□□ 2.37
CKLF-207ENST00000534692 SYT17Q9BSW7 474 aa29.85■■■□□ 2.37
CKLF-207ENST00000534692 MBIPQ9NS73 344 aa29.85■■■□□ 2.37
CKLF-207ENST00000534692 SENP3-EIF4A1A0A087X0R7 540 aa29.84■■■□□ 2.37
CKLF-207ENST00000534692 PIP4K2AP48426 406 aaPredicted RBP29.84■■■□□ 2.37
CKLF-207ENST00000534692 KIF13BQ9NQT8 1826 aa29.83■■■□□ 2.37
CKLF-207ENST00000534692 ERBB4Q15303 1308 aa29.83■■■□□ 2.37
CKLF-207ENST00000534692 NGEFQ8N5V2 710 aa29.83■■■□□ 2.37
CKLF-207ENST00000534692 BCL2L12Q9HB09 334 aa29.83■■■□□ 2.37
CKLF-207ENST00000534692 ZNF330Q9Y3S2 320 aaPredicted RBP29.83■■■□□ 2.37
CKLF-207ENST00000534692 NPM2Q86SE8 214 aaKnown RBP29.82■■■□□ 2.36
CKLF-207ENST00000534692 IL16Q14005 1332 aa29.81■■■□□ 2.36
CKLF-207ENST00000534692 KRT24Q2M2I5 525 aa29.81■■■□□ 2.36
CKLF-207ENST00000534692 HOXB7P09629 217 aa29.8■■■□□ 2.36
CKLF-207ENST00000534692 TBC1D2BQ9UPU7 963 aa29.8■■■□□ 2.36
CKLF-207ENST00000534692 AFDNP55196 1824 aaKnown RBP29.79■■■□□ 2.36
CKLF-207ENST00000534692 CAMTA2O94983 1202 aa29.78■■■□□ 2.36
CKLF-207ENST00000534692 TM4SF1P30408 202 aa29.78■■■□□ 2.36
CKLF-207ENST00000534692 DZIP3Q86Y13 1208 aaKnown RBP29.78■■■□□ 2.36
CKLF-207ENST00000534692 CD2APQ9Y5K6 639 aa29.78■■■□□ 2.36
CKLF-207ENST00000534692 NRXN2Q9P2S2 1712 aa29.77■■■□□ 2.36
CKLF-207ENST00000534692 MIER1Q8N108 512 aa29.77■■■□□ 2.36
CKLF-207ENST00000534692 DDR1Q08345 913 aa29.76■■■□□ 2.35
CKLF-207ENST00000534692 WDR63Q8IWG1 891 aa29.76■■■□□ 2.35
CKLF-207ENST00000534692 KLHL34Q8N239 644 aa29.76■■■□□ 2.35
CKLF-207ENST00000534692 PARP3Q9Y6F1 533 aa29.76■■■□□ 2.35
CKLF-207ENST00000534692 RGL2O15211 777 aa29.75■■■□□ 2.35
CKLF-207ENST00000534692 EIF2S2P20042 333 aaKnown RBP29.75■■■□□ 2.35
CKLF-207ENST00000534692 NFIXQ14938 502 aa29.75■■■□□ 2.35
CKLF-207ENST00000534692 SALL2Q9Y467 1007 aaPredicted RBP29.75■■■□□ 2.35
CKLF-207ENST00000534692 C10orf71Q711Q0 1435 aa29.74■■■□□ 2.35
CKLF-207ENST00000534692 POLRMTO00411 1230 aaKnown RBP29.74■■■□□ 2.35
CKLF-207ENST00000534692 PDIA6Q15084 440 aa29.74■■■□□ 2.35
CKLF-207ENST00000534692 DUSP27Q5VZP5 1158 aa29.74■■■□□ 2.35
CKLF-207ENST00000534692 NUP98P52948 1817 aa29.73■■■□□ 2.35
CKLF-207ENST00000534692 LRP10Q7Z4F1 713 aa29.73■■■□□ 2.35
CKLF-207ENST00000534692 KIAA1551Q9HCM1 1747 aa29.73■■■□□ 2.35
CKLF-207ENST00000534692 MYL6BP14649 208 aa29.71■■■□□ 2.35
CKLF-207ENST00000534692 CLEC4GQ6UXB4 293 aa29.71■■■□□ 2.35
CKLF-207ENST00000534692 NLGN2Q8NFZ4 835 aa29.71■■■□□ 2.35
CKLF-207ENST00000534692 HDGFL1Q5TGJ6 251 aa29.7■■■□□ 2.35
CKLF-207ENST00000534692 TSR2Q969E8 191 aaKnown RBP29.7■■■□□ 2.35
CKLF-207ENST00000534692 ZNF521Q96K83 1311 aa29.7■■■□□ 2.34
CKLF-207ENST00000534692 PROSER3Q2NL68 480 aa29.69■■■□□ 2.34
CKLF-207ENST00000534692 TBC1D9BQ66K14 1250 aa29.69■■■□□ 2.34
CKLF-207ENST00000534692 DDX21Q9NR30 783 aaKnown RBP eCLIP29.69■■■□□ 2.34
CKLF-207ENST00000534692 C8orf58Q8NAV2 365 aa29.68■■■□□ 2.34
CKLF-207ENST00000534692 NECTIN2Q92692 538 aa29.68■■■□□ 2.34
CKLF-207ENST00000534692 ZNF652Q9Y2D9 606 aa29.68■■■□□ 2.34
CKLF-207ENST00000534692 ERVV-1B6SEH8 477 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms